BDGP Sequence Production Resources |
Search the DGRC for AT09701
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 97 |
Well: | 1 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG12054-RB |
Protein status: | AT09701.pep: gold |
Preliminary Size: | 3128 |
Sequenced Size: | 2277 |
Gene | Date | Evidence |
---|---|---|
CG12054 | 2002-09-19 | Blastp of sequenced clone |
CG12054 | 2008-04-29 | Release 5.5 accounting |
CG12054 | 2008-08-15 | Release 5.9 accounting |
CG12054 | 2008-12-18 | 5.12 accounting |
2277 bp (2277 high quality bases) assembled on 2002-09-19
GenBank Submission: BT001290
> AT09701.complete TAGATATCTGACTTTGGCACACGTATACCTTGTCATCTGGGGATTTAAGT TGCCCATCTAATAATCGATTAGCTGGTTTTAAACTAACTGCAGTGACACA ATCATTTGTGAGATCCGCAGCTGATCGATGCTTGTTATTTTATCGTTTAG CAGCCCCTCGTTAACTGCAACTGCAATCGCATGACGAATGTACAGGGTGC CCGGTGGCGAATATGATGAATGGCCCGGCTGACACAGTTACGCACCAAAA CGATTTAATTGGGAAATAAAGCGTGCTCATGGAGGTTATGTTGTGCGCAC ACACATGGATCGAGAAGTGAATAAAGACGGCGAAGGGGACAAACCGAGGA GGGGCACCTGTTATTATGCACTCGCTGATTAAGCAAGCTTTGGGCTTATG CTTGTTCTGGCGATAAGATAAAGTACCCACGCCGCAGACCATGTGCTCCT CCTGGTACTCCGTCGCAGTACCAGATCGAAGCCCCCATAAACCCCGTGGA AAATGCGTCAGCAGGCGCACTAAATCCGTCGCCATTCCGTACCCCACTAT GACCCAAAGGTGGTCGAACAGAAGGAGCAGGCCCAGCCTGCCTGCCTGCC CTTAAGTTATGTCCTGCGCTTCATCACCGAGGAGAACCGCAAGGAGGCGG GCTCGTTCCTGGCCAGCAACACAACAGCCCCACCGACCACCAATAGCGGA TCCAATGCAGCTGGCCACGGGAATGGCAATGTGGAGCTCAAGCGAAAGCT GGCCATCAAGCACCACAGTTACAGTATGTCCTCGTCCAACCGCAGCACCA CGCCAACAGGCAGCGAAATGGACGAGGACGAAATGGTGGTCACGGAGTCG GAGGATAGCAACGACTCCTGGACCACCGAGGAGTTTAGCTCGGAGTTTAT CATGCGCTACGGCAGCAGGCATTCCGGTGGTGGAAGCAATGGCACGCCCG GCAATGAGAAACCCTTCGCCTGCCCTGTTCCGGGATGCAAAAAACGTTAC AAGAACGTCAACGGCATCAAGTACCATTCGAAGAACGGTCACAAAAAGGA CGGAAGAGTGCGCAAGGGCTACAAGTGTCACTGCGGTAAGAGTTACAAAA CGGCCCAGGGCCTGAAGAACCACGCGCTGCACACACACAACTCGCAGCCG GATAGTGTGCTGAATGCCCAGCTGGCCAATGCGTTGGCCATAGGCGATGG GGCCAGCGCGGCCACGCCTGTGGGCAGCAGCAACACCTCCTCCAATCCGA ACCCGCCGCCCATCATTCAGCGCAGCAACTCGCCGTCTCAGTCGCTGGGC TCGTTGAGTCCGTCGAGCATCAGCAACATGTCGAGCAGCGCCAGCAGTTG CCATGGAGGCAGCGGCAGTCTGTCGAACGGGAATAATGGCAACAATGGGA GCACTACTAGCAACACTGCCATTCTCACTAGCAACGGGAATGTCCTGCAG CAGCTCAGTGCCGGGAATGTGGTCACCCTGACCAATCTTCCCACGCAACA GCATCAGCAGCAACAGCCGCAGCCGCAACAGCAGCAGCAGCAGCAACTCC ATCAAAACACTGCAACAGAAACCTCTTACTCCTGCTCAAACAACAGCAAC CTCAGCAATCCCAACAGTAACCACGGCAGCAGCGATTCCAGCAAGCCGCC CACGACTCTCCTGTCCGTTAACAAGAGGTCCACAGCAATCGCTTCAGCGA AACTGCCAACCACCGGCAATTCCCTGCCCATGCAGATCTCACCCAACTTC ATTGAGCACAAGTATTCCGCGCTGGACATGAAGGAGAAGTTCTTCTTGAA TCTGAGGGCCGGCAAAGCGGTGGCCAGTTCACAGGGAGCCGATAGAATGG GCTCACCAATGGGACACCAATCGGATGTTGGCATTTCCGGCGGATCAGGA GCAGGCGGTGGCTTGCGGGCGGTTGCTGTGGGTCAAATGTGCGCGCTGCA AAACGAGCACATTCACCAAAATCTCTTCAAGAAAACGATCAACTGATCGG CATATCGGATGAGAAGGCAAGAGAGTTGGCTGTGATGAAGTAGTAACTAA CTGACTAACAAACCTGACAAGAGGCGGAGAAAGAGGATTCGTCAATAAGG CAGATGGGAAAAGGATGCAGAAGCTGCAGCAATTAATGAAGGAGGGATAA GTGAGGGAGTTGGGCGCCGCCCTACGGTCCTTAGAGAAGTTTTCCAAGAC AAGGCAACAAGAAGCAAGAAGCAAGAATTTCCATTGGCTTCCAAAACACC ACAAAATGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12054-RB | 2277 | CG12054-RB | 1..2277 | 1..2277 | 11235 | 99.5 | Plus |
CG12054.c | 2505 | CG12054.c | 70..1092 | 546..1568 | 5070 | 99.7 | Plus |
CG12054-RA | 3275 | CG12054-RA | 711..1733 | 546..1568 | 5070 | 99.7 | Plus |
CG12054.c | 2505 | CG12054.c | 1..69 | 248..316 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 27051076..27051769 | 1566..2259 | 3470 | 100 | Plus |
chr3R | 27901430 | chr3R | 27047303..27047847 | 1..545 | 2680 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 27048951..27049464 | 1055..1568 | 2555 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 27048199..27048463 | 546..810 | 1325 | 100 | Plus |
chr3R | 27901430 | chr3R | 27048750..27048889 | 917..1056 | 685 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 27048525..27048636 | 808..919 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 31228694..31229405 | 1566..2277 | 3545 | 99.9 | Plus |
3R | 32079331 | 3R | 31224917..31225461 | 1..545 | 2635 | 98.9 | Plus |
3R | 32079331 | 3R | 31226565..31227078 | 1055..1568 | 2540 | 99.6 | Plus |
3R | 32079331 | 3R | 31225813..31226077 | 546..810 | 1325 | 100 | Plus |
3R | 32079331 | 3R | 31226364..31226503 | 917..1056 | 685 | 99.3 | Plus |
3R | 32079331 | 3R | 31226139..31226250 | 808..919 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30969525..30970236 | 1566..2277 | 3545 | 99.8 | Plus |
3R | 31820162 | 3R | 30965748..30966292 | 1..545 | 2635 | 98.8 | Plus |
3R | 31820162 | 3R | 30967396..30967909 | 1055..1568 | 2540 | 99.6 | Plus |
3R | 31820162 | 3R | 30966644..30966908 | 546..810 | 1325 | 100 | Plus |
3R | 31820162 | 3R | 30967195..30967334 | 917..1056 | 685 | 99.2 | Plus |
3R | 31820162 | 3R | 30966970..30967081 | 808..919 | 560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27047303..27047847 | 1..545 | 99 | -> | Plus |
chr3R | 27048199..27048462 | 546..809 | 100 | -> | Plus |
chr3R | 27048527..27048635 | 810..918 | 100 | -> | Plus |
chr3R | 27048752..27048889 | 919..1056 | 99 | -> | Plus |
chr3R | 27048953..27049390 | 1057..1494 | 99 | == | Plus |
chr3R | 27049442..27049464 | 1546..1568 | 100 | -> | Plus |
chr3R | 27051079..27051769 | 1569..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..1221 | 776..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..1221 | 776..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RE | 98..1551 | 540..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..1221 | 776..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RE | 98..1551 | 540..1996 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..2259 | 1..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..2259 | 1..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..2259 | 1..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..2259 | 1..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12054-RB | 1..2259 | 1..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31224917..31225461 | 1..545 | 98 | -> | Plus |
3R | 31225813..31226076 | 546..809 | 100 | -> | Plus |
3R | 31226141..31226249 | 810..918 | 100 | -> | Plus |
3R | 31226366..31226503 | 919..1056 | 99 | -> | Plus |
3R | 31226567..31227078 | 1057..1568 | 99 | -> | Plus |
3R | 31228697..31229387 | 1569..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31224917..31225461 | 1..545 | 98 | -> | Plus |
3R | 31225813..31226076 | 546..809 | 100 | -> | Plus |
3R | 31226141..31226249 | 810..918 | 100 | -> | Plus |
3R | 31226366..31226503 | 919..1056 | 99 | -> | Plus |
3R | 31226567..31227078 | 1057..1568 | 99 | -> | Plus |
3R | 31228697..31229387 | 1569..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31224917..31225461 | 1..545 | 98 | -> | Plus |
3R | 31225813..31226076 | 546..809 | 100 | -> | Plus |
3R | 31226141..31226249 | 810..918 | 100 | -> | Plus |
3R | 31226366..31226503 | 919..1056 | 99 | -> | Plus |
3R | 31226567..31227078 | 1057..1568 | 99 | -> | Plus |
3R | 31228697..31229387 | 1569..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27050639..27051183 | 1..545 | 98 | -> | Plus |
arm_3R | 27051535..27051798 | 546..809 | 100 | -> | Plus |
arm_3R | 27051863..27051971 | 810..918 | 100 | -> | Plus |
arm_3R | 27052088..27052225 | 919..1056 | 99 | -> | Plus |
arm_3R | 27052289..27052800 | 1057..1568 | 99 | -> | Plus |
arm_3R | 27054419..27055109 | 1569..2259 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30965748..30966292 | 1..545 | 98 | -> | Plus |
3R | 30966644..30966907 | 546..809 | 100 | -> | Plus |
3R | 30966972..30967080 | 810..918 | 100 | -> | Plus |
3R | 30967197..30967334 | 919..1056 | 99 | -> | Plus |
3R | 30967398..30967909 | 1057..1568 | 99 | -> | Plus |
3R | 30969528..30970218 | 1569..2259 | 99 | Plus |
Translation from 775 to 1995
> AT09701.pep MSSSNRSTTPTGSEMDEDEMVVTESEDSNDSWTTEEFSSEFIMRYGSRHS GGGSNGTPGNEKPFACPVPGCKKRYKNVNGIKYHSKNGHKKDGRVRKGYK CHCGKSYKTAQGLKNHALHTHNSQPDSVLNAQLANALAIGDGASAATPVG SSNTSSNPNPPPIIQRSNSPSQSLGSLSPSSISNMSSSASSCHGGSGSLS NGNNGNNGSTTSNTAILTSNGNVLQQLSAGNVVTLTNLPTQQHQQQQPQP QQQQQQQLHQNTATETSYSCSNNSNLSNPNSNHGSSDSSKPPTTLLSVNK RSTAIASAKLPTTGNSLPMQISPNFIEHKYSALDMKEKFFLNLRAGKAVA SSQGADRMGSPMGHQSDVGISGGSGAGGGLRAVAVGQMCALQNEHIHQNL FKKTIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18420-PA | 765 | GF18420-PA | 119..342 | 8..238 | 901 | 84 | Plus |
Dana\GF18420-PA | 765 | GF18420-PA | 685..765 | 318..406 | 269 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11797-PA | 716 | GG11797-PA | 118..347 | 8..240 | 913 | 97.4 | Plus |
Dere\GG11797-PA | 716 | GG11797-PA | 593..716 | 283..406 | 501 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13980-PA | 597 | GH13980-PA | 494..597 | 319..406 | 202 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12054-PF | 516 | CG12054-PF | 111..516 | 1..406 | 2123 | 100 | Plus |
CG12054-PE | 516 | CG12054-PE | 111..516 | 1..406 | 2123 | 100 | Plus |
CG12054-PB | 406 | CG12054-PB | 1..406 | 1..406 | 2123 | 100 | Plus |
CG12054-PA | 628 | CG12054-PA | 111..413 | 1..308 | 1409 | 89.9 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 461..836 | 2..376 | 165 | 23.5 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 461..836 | 2..376 | 165 | 23.5 | Plus |
Lmx1a-PC | 639 | CG32105-PC | 8..241 | 179..379 | 161 | 27.8 | Plus |
Lmx1a-PB | 640 | CG32105-PB | 8..241 | 179..379 | 161 | 27.8 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 956..1208 | 2..299 | 156 | 24.8 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 956..1208 | 2..299 | 156 | 24.8 | Plus |
opa-PA | 609 | CG1133-PA | 314..491 | 57..260 | 155 | 29.5 | Plus |
Sp1-PB | 520 | CG1343-PB | 243..461 | 57..260 | 154 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22324-PA | 711 | GI22324-PA | 117..338 | 9..237 | 752 | 72.8 | Plus |
Dmoj\GI22325-PA | 106 | GI22325-PA | 11..106 | 318..406 | 199 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13544-PA | 695 | GL13544-PA | 117..346 | 8..240 | 816 | 81.5 | Plus |
Dper\GL13545-PA | 239 | GL13545-PA | 155..239 | 318..406 | 262 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30079-PA | 696 | GA30079-PA | 117..345 | 8..240 | 805 | 82 | Plus |
Dpse\GA30079-PB | 452 | GA30079-PB | 368..452 | 318..406 | 258 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12927-PA | 759 | GM12927-PA | 118..350 | 8..240 | 992 | 99.6 | Plus |
Dsec\GM12927-PA | 759 | GM12927-PA | 636..759 | 283..406 | 560 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21565-PA | 761 | GD21565-PA | 118..350 | 8..240 | 990 | 99.6 | Plus |
Dsim\GD21565-PA | 761 | GD21565-PA | 638..761 | 283..406 | 566 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10511-PA | 273 | GJ10511-PA | 119..242 | 9..132 | 668 | 96 | Plus |
Dvir\GJ10513-PA | 100 | GJ10513-PA | 1..100 | 319..406 | 203 | 51.5 | Plus |
Translation from 775 to 1995
> AT09701.hyp MSSSNRSTTPTGSEMDEDEMVVTESEDSNDSWTTEEFSSEFIMRYGSRHS GGGSNGTPGNEKPFACPVPGCKKRYKNVNGIKYHSKNGHKKDGRVRKGYK CHCGKSYKTAQGLKNHALHTHNSQPDSVLNAQLANALAIGDGASAATPVG SSNTSSNPNPPPIIQRSNSPSQSLGSLSPSSISNMSSSASSCHGGSGSLS NGNNGNNGSTTSNTAILTSNGNVLQQLSAGNVVTLTNLPTQQHQQQQPQP QQQQQQQLHQNTATETSYSCSNNSNLSNPNSNHGSSDSSKPPTTLLSVNK RSTAIASAKLPTTGNSLPMQISPNFIEHKYSALDMKEKFFLNLRAGKAVA SSQGADRMGSPMGHQSDVGISGGSGAGGGLRAVAVGQMCALQNEHIHQNL FKKTIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12054-PB | 406 | CG12054-PB | 1..406 | 1..406 | 2123 | 100 | Plus |
CG12054-PF | 516 | CG12054-PF | 111..516 | 1..406 | 2123 | 100 | Plus |
CG12054-PE | 516 | CG12054-PE | 111..516 | 1..406 | 2123 | 100 | Plus |
CG12054-PA | 628 | CG12054-PA | 111..413 | 1..308 | 1409 | 89.9 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 461..836 | 2..376 | 165 | 23.5 | Plus |