BDGP Sequence Production Resources |
Search the DGRC for AT09889
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 98 |
Well: | 89 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG13243-RA |
Protein status: | AT09889.pep: gold |
Preliminary Size: | 1194 |
Sequenced Size: | 1359 |
Gene | Date | Evidence |
---|---|---|
CG13243 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13243 | 2002-06-01 | Blastp of sequenced clone |
CG13243 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13243 | 2008-04-29 | Release 5.5 accounting |
CG13243 | 2008-08-15 | Release 5.9 accounting |
CG13243 | 2008-12-18 | 5.12 accounting |
1359 bp (1359 high quality bases) assembled on 2002-06-01
GenBank Submission: AY118276
> AT09889.complete AAATTAGACTGTAAAATCAAAAGAATGGATGCTCAAGGAGACCAGGATAT GCGGCTGGATCCGCCGCTCTTTGTGACCTGTGACATGGAGCAGTTTCGCG ATCCAAACAAGAAGCGTGCCGCCAACGATGCCTGCGAGGAGCTGGACAAG CTGGATGCCCAGGACGAGATCAGTGTGTCGAGTATCATTTCGGCGCTATT GAGACCGATTGAGCCCTCGGACGATCAGTACAAGGTGTGCGACTGGGGCA TCAATCCCAAGCAGTTTATGCCCACCAAACAGGCGATCATTTTCAAGGAA CAGTTGTTCATATCGAAGTTGCGGAATACAAATTGCAAGCTAAATGAAAA TCTAAAAATCTTCTTTGAGCGGGAACTTGAGCAGATTGGACGCTTCTGTT TGAATGTGGAGGAATCCTTTGATGGCTATGTGATCTTCAGCAGCAGCAAA ATGAAGAAGGGCAAGGGTATGACGGAATGTGGTCACCAGTTAAAGGGGAA GTACGATGACAAGTTCCTTCTCATCTGCGAGAAGAGATCGGAGTTCGACC GAATCGACAATACTCGGGTAGAGAAGACGCTGGAGTTGCGAAACCATGCC GATTTGATGCTAACCGCCATTCGCGAAACCAAAATCAATGAGGAAGTGCA GCGCTTCAAGGCTCGCATCGATATCAAGGATCGCGATCATGTGTTCGTCC TGGATGGCGGGATTATGCTGCTGATGCGACACCTAGTGTGCAACAATTTT GTGGGCAACTTCGAGTACTACACAATGAATTTGTATGGCCGGGTCCTTCG CTGCAATCTGGTTGTTTCCAAGGAGCGCAAGGAGGTGCGAATTTTCTATC GCACATACAAGAATGTCGTGCACATCTTCACCCAGCAATGTTTCAACGAT GAGCTCCAGGATGTGGCCGAGACCTTCATGACTCCTGAGGGCCGGATTGT TCTGCATTATTGGCGTGGCTATAACTACCTTTTGCATGCCGCCTGCATGC CACCGAAGAGAAAGGAACCTATCCTACCCAAATTGGAACTAATGTGGCGC CAAAACGAACAGCTTTCTCGCAAGTTCCGGGAGCTCAAAGCCCTCAATTA CGAGAACGCCACCAGCTATCTGAGCAGCAATTCACAGCTGGCCGATTTTA TGCAGGATTATGTGCTCAATCTGTTGCGGTACAAGCCCAGCAATGTCCTA GAGTTCTCCATTATGTTTTTCCAGAATATGTCAAAGGGATAGCTTAATTC TTAATTAGGTAATGAGTGTTTTCAAAATTTCAAGTGATCTTTGGCCAGAT AATCCTATAAATACATTCGGGATGGGCCTATTTAGTATATAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13243-RA | 1467 | CG13243-RA | 82..1422 | 1..1341 | 6705 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 15851527..15852839 | 28..1340 | 6565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15852752..15854065 | 28..1341 | 6570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 1579..1617 | 530..568 | 114 | 76.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 15851448..15851475 | 1..28 | 100 | -> | Plus |
chr2L | 15851528..15852839 | 29..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1218 | 25..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1218 | 25..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1218 | 25..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1218 | 25..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1218 | 25..1242 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1340 | 1..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1340 | 1..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 82..1421 | 1..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 1..1340 | 1..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13243-RA | 82..1421 | 1..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15852673..15852700 | 1..28 | 100 | -> | Plus |
2L | 15852753..15854064 | 29..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15852673..15852700 | 1..28 | 100 | -> | Plus |
2L | 15852753..15854064 | 29..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15852673..15852700 | 1..28 | 100 | -> | Plus |
2L | 15852753..15854064 | 29..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 15852673..15852700 | 1..28 | 100 | -> | Plus |
arm_2L | 15852753..15854064 | 29..1340 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15852753..15854064 | 29..1340 | 100 | Plus | |
2L | 15852673..15852700 | 1..28 | 100 | -> | Plus |
Translation from 1 to 1241
> AT09889.hyp KLDCKIKRMDAQGDQDMRLDPPLFVTCDMEQFRDPNKKRAANDACEELDK LDAQDEISVSSIISALLRPIEPSDDQYKVCDWGINPKQFMPTKQAIIFKE QLFISKLRNTNCKLNENLKIFFERELEQIGRFCLNVEESFDGYVIFSSSK MKKGKGMTECGHQLKGKYDDKFLLICEKRSEFDRIDNTRVEKTLELRNHA DLMLTAIRETKINEEVQRFKARIDIKDRDHVFVLDGGIMLLMRHLVCNNF VGNFEYYTMNLYGRVLRCNLVVSKERKEVRIFYRTYKNVVHIFTQQCFND ELQDVAETFMTPEGRIVLHYWRGYNYLLHAACMPPKRKEPILPKLELMWR QNEQLSRKFRELKALNYENATSYLSSNSQLADFMQDYVLNLLRYKPSNVL EFSIMFFQNMSKG*
Translation from 24 to 1241
> AT09889.pep MDAQGDQDMRLDPPLFVTCDMEQFRDPNKKRAANDACEELDKLDAQDEIS VSSIISALLRPIEPSDDQYKVCDWGINPKQFMPTKQAIIFKEQLFISKLR NTNCKLNENLKIFFERELEQIGRFCLNVEESFDGYVIFSSSKMKKGKGMT ECGHQLKGKYDDKFLLICEKRSEFDRIDNTRVEKTLELRNHADLMLTAIR ETKINEEVQRFKARIDIKDRDHVFVLDGGIMLLMRHLVCNNFVGNFEYYT MNLYGRVLRCNLVVSKERKEVRIFYRTYKNVVHIFTQQCFNDELQDVAET FMTPEGRIVLHYWRGYNYLLHAACMPPKRKEPILPKLELMWRQNEQLSRK FRELKALNYENATSYLSSNSQLADFMQDYVLNLLRYKPSNVLEFSIMFFQ NMSKG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14923-PA | 422 | GF14923-PA | 27..421 | 11..405 | 1967 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25175-PA | 405 | GG25175-PA | 1..405 | 1..405 | 2150 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11352-PA | 408 | GH11352-PA | 6..406 | 5..403 | 1795 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13243-PB | 405 | CG13243-PB | 1..405 | 1..405 | 2135 | 100 | Plus |
CG13243-PA | 405 | CG13243-PA | 1..405 | 1..405 | 2135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17363-PA | 402 | GI17363-PA | 6..400 | 9..403 | 1824 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15296-PA | 397 | GL15296-PA | 2..394 | 11..403 | 1898 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12147-PA | 397 | GA12147-PA | 2..394 | 11..403 | 1903 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18637-PA | 405 | GM18637-PA | 1..405 | 1..405 | 2153 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24021-PA | 405 | GD24021-PA | 1..405 | 1..405 | 2164 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18036-PA | 395 | GJ18036-PA | 1..393 | 11..403 | 1825 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24764-PA | 413 | GK24764-PA | 9..407 | 5..403 | 1848 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21155-PA | 405 | GE21155-PA | 1..405 | 1..405 | 2131 | 96.8 | Plus |