Clone AT09986 Report

Search the DGRC for AT09986

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:99
Well:86
Vector:pOTB7
Associated Gene/TranscriptCG15625-RA
Protein status:AT09986.pep: gold
Preliminary Size:1241
Sequenced Size:1221

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15625 2002-01-01 Sim4 clustering to Release 2
CG15625 2002-02-22 Blastp of sequenced clone
CG15625 2008-04-29 Release 5.5 accounting
CG15625 2008-08-15 Release 5.9 accounting
CG15625 2008-12-18 5.12 accounting

Clone Sequence Records

AT09986.complete Sequence

1221 bp (1221 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089301

> AT09986.complete
ATTTAATAAAACAAAACAATCCAGTAAAAGACTCTAAGATTGTTTGCTAA
ATTTATGCAAGATGCCCTATCTATATGGAATAGCGGACACCAAGTTCCTC
CACCAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCACCCAC
CAAGTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGATGGGG
ACGATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGGAACTG
AGCATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAATGGGA
TGACATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACAGTACA
TGAACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGCTCCTG
GACGCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCACATCCG
TCACATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGACGAAGT
TCTCATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGTACCTG
CTGTTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGGAGTGA
TCTCTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCTGGACC
ACTGGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAGCGCAAGTAC
AAGGAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGCGAGGA
GGCGGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGAACTCA
TGTGCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCACGGGAT
CTCCGGCTGCCGTGGCGATTGGAGTGCCTGCCGCCCATGCTGGAAACCAC
CATGAGCAAGTGGAACGCCTTGCAGGCGCAGTGCTCCACCTGCATCCCGC
CGTGCGAGTGCCGCTGGCCACCGCGATTCTATCTCACGGGCACCGTCATT
CGCTGCCTGCAGCAGCGGTTCCCGGAGAAGTTCTGCCCCATCTTCGACGA
ACGGTACAGGGCCTCGCCGCGACCCAGTCTCGTGGAGCGCTGGACGCGAT
TCTCCATTTGATGCGGTACTTTTTATTTCATAGATATGGTATTCTATATT
TAAGCTATGTAAAGATCACAGTTTATATCACAAAGACAAGTTCTGAATGC
GAAAAAAAAAAAAAAAAAAAA

AT09986.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625.b 1605 CG15625.b 304..1508 1..1205 6025 100 Plus
CG15625-RA 1377 CG15625-RA 53..1257 1..1205 6025 100 Plus
CG15625.c 2170 CG15625.c 462..1666 1..1205 6025 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4889541..4890400 352..1201 3995 97.9 Plus
chr2L 23010047 chr2L 4889129..4889480 1..352 1700 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:44:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4890428..4891281 352..1205 4270 100 Plus
2L 23513712 2L 4890016..4890367 1..352 1760 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4890428..4891281 352..1205 4270 100 Plus
2L 23513712 2L 4890016..4890367 1..352 1760 100 Plus
Blast to na_te.dros performed on 2019-03-16 05:25:13 has no hits.

AT09986.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:26:14 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4889129..4889480 1..352 98 -> Plus
chr2L 4889542..4890400 353..1201 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:58:28 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 62..1111 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:42:23 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 62..1111 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:42:31 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 62..1111 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:11:12 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 62..1111 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:02:38 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 1..1050 62..1111 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:07:06 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 22..1222 1..1201 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:42:22 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 22..1222 1..1201 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:42:31 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 22..1222 1..1201 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:11:12 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 22..1222 1..1201 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:02:38 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
CG15625-RA 22..1222 1..1201 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:14 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4890016..4890367 1..352 100 -> Plus
2L 4890429..4891277 353..1201 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:14 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4890016..4890367 1..352 100 -> Plus
2L 4890429..4891277 353..1201 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:14 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4890016..4890367 1..352 100 -> Plus
2L 4890429..4891277 353..1201 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:42:31 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4890016..4890367 1..352 100 -> Plus
arm_2L 4890429..4891277 353..1201 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:45:38 Download gff for AT09986.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4890016..4890367 1..352 100 -> Plus
2L 4890429..4891277 353..1201 100   Plus

AT09986.pep Sequence

Translation from 61 to 1110

> AT09986.pep
MPYLYGIADTKFLHQKVKKKTKIRSDMAPTKFQRNEFLKGCPKYDGDDIP
IQFRTTPDSLVELSIIVVDKLPLPSIFEWDDMDIRRWINGYGYPQYMNTF
RVNMITGRKLLLLDASALCAMNIKNFDHIRHISYGIRMLFHFELTKFSSS
ISLPDEKPNELYLLFHTQTGVNYDEVRRSDLYRRMQMLRERARNLDHWDL
LYLWLRHEQERKYKELIGMVPRFTMYKCEEAAKPPEEPEDMEPEELMCMT
CIPPCDCDWTARDLRLPWRLECLPPMLETTMSKWNALQAQCSTCIPPCEC
RWPPRFYLTGTVIRCLQQRFPEKFCPIFDERYRASPRPSLVERWTRFSI*

AT09986.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23547-PA 351 GF23547-PA 1..351 1..349 1436 77.4 Plus
Dana\GF15598-PA 257 GF15598-PA 52..246 43..242 377 36 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25026-PA 350 GG25026-PA 1..350 1..349 1734 91.4 Plus
Dere\GG23918-PA 243 GG23918-PA 51..229 43..226 380 38.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11189-PA 377 GH11189-PA 1..339 1..339 1085 64.5 Plus
Dgri\GH11021-PA 257 GH11021-PA 52..246 43..242 385 37 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-PA 349 CG15625-PA 1..349 1..349 1926 100 Plus
CG13996-PA 256 CG13996-PA 51..245 43..242 389 37 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:03:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18110-PA 346 GI18110-PA 1..346 1..349 1051 57.2 Plus
Dmoj\GI22590-PA 347 GI22590-PA 1..347 1..349 1024 59.7 Plus
Dmoj\GI10165-PA 341 GI10165-PA 1..341 1..349 872 54 Plus
Dmoj\GI17540-PA 267 GI17540-PA 62..249 43..235 390 39.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18641-PA 345 GL18641-PA 1..345 1..349 1391 74.5 Plus
Dper\GL19050-PA 251 GL19050-PA 47..233 44..235 375 38 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13855-PA 345 GA13855-PA 1..345 1..349 1395 74.5 Plus
Dpse\GA12685-PA 251 GA12685-PA 47..233 44..235 375 38 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18499-PA 349 GM18499-PA 1..349 1..349 1827 97.7 Plus
Dsec\GM18590-PA 260 GM18590-PA 51..245 43..242 386 37 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23307-PA 349 GD23307-PA 1..349 1..349 1828 97.7 Plus
Dsim\GD23378-PA 256 GD23378-PA 51..245 43..242 387 37 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16297-PA 354 GJ16297-PA 1..354 1..349 1206 68.2 Plus
Dvir\GJ10867-PA 347 GJ10867-PA 1..347 1..349 1097 63.5 Plus
Dvir\GJ10311-PA 352 GJ10311-PA 1..352 1..349 1056 61.1 Plus
Dvir\GJ15442-PA 263 GJ15442-PA 58..245 43..235 368 37.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24470-PA 348 GK24470-PA 1..348 1..349 1257 70 Plus
Dwil\GK14714-PA 237 GK14714-PA 31..226 42..242 392 38.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:03:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18315-PA 349 GE18315-PA 1..349 1..349 1646 90 Plus
Dyak\GE25822-PA 256 GE25822-PA 51..245 43..242 384 36.5 Plus

AT09986.hyp Sequence

Translation from 61 to 1110

> AT09986.hyp
MPYLYGIADTKFLHQKVKKKTKIRSDMAPTKFQRNEFLKGCPKYDGDDIP
IQFRTTPDSLVELSIIVVDKLPLPSIFEWDDMDIRRWINGYGYPQYMNTF
RVNMITGRKLLLLDASALCAMNIKNFDHIRHISYGIRMLFHFELTKFSSS
ISLPDEKPNELYLLFHTQTGVNYDEVRRSDLYRRMQMLRERARNLDHWDL
LYLWLRHEQERKYKELIGMVPRFTMYKCEEAAKPPEEPEDMEPEELMCMT
CIPPCDCDWTARDLRLPWRLECLPPMLETTMSKWNALQAQCSTCIPPCEC
RWPPRFYLTGTVIRCLQQRFPEKFCPIFDERYRASPRPSLVERWTRFSI*

AT09986.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15625-PA 349 CG15625-PA 1..349 1..349 1926 100 Plus
CG13996-PA 256 CG13996-PA 51..245 43..242 389 37 Plus