BDGP Sequence Production Resources |
Search the DGRC for AT10134
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 101 |
Well: | 34 |
Vector: | pOTB7 |
Associated Gene/Transcript | orb-RC |
Protein status: | AT10134.pep: gold |
Preliminary Size: | 4860 |
Sequenced Size: | 1967 |
Gene | Date | Evidence |
---|---|---|
CG10868 | 2002-09-19 | Blastp of sequenced clone |
CG10868 | 2003-01-01 | Sim4 clustering to Release 3 |
orb | 2008-04-29 | Release 5.5 accounting |
orb | 2008-08-15 | Release 5.9 accounting |
orb | 2008-12-18 | 5.12 accounting |
1967 bp (1967 high quality bases) assembled on 2002-09-19
GenBank Submission: BT001292
> AT10134.complete GCGTTGGTCTTTATTACAATTTATATTTTTAAAGTTTTTTTTTCAAAATT GCAGTTTACAATAGGTATTATGGCTAAAGTTTTACGTGTGAATTTGCTGT CTGTAAATAGCAACAAAATTCCACATCAACAACAGCAACAACAACAGCAG CAGCAGCAACAACAGCAGCAGCAACAACAGAATCAGCAGCAATTGCAGGT TCAGCAACAACATCAGTTGCAGCAGCAGTTTGTTAACCTAAACAGGAACT ACGAGCAACAGATATCTGCCAATTTGGGTAGCCAACAACATGGGTTCGAG CACAACGGCGTGGGTGTGGGTGCTTCTAGTAGCGGAAATGAGAACTGCTT TAGCCAGTATAATCTAGAAAACATCACCAGTGTGGACATGGAGCTGGCCA AACTGCAGAATTTGCAACGCATCAACACGCTAAAGCTCCTGCATGCCCAA GCTCAACAAATGCCGCTGATCAACCAGCTCCTGCAGAGCTATGCCGGCAA CGCCATAGGCAGCGTCGGTGGAAGCAATCTTGGTAACTTGATGAGCGCAG GCGGATCATCACTGATGACAGAAATGGCGGGAAACGTTGGCGGCATTATA ACCACCAACGATGGCCACCTGGATCGCGTAGCTAAGTTCTATAAGAGTTC GGCTGCCCTGTGCGATGCCACATGCACATGGAGTGGACACCTGCCGCCGC GTTCGCACCGTATGCTCAACTATTCTCCCAAGGTCTTCCTCGGCGGGATT CCCTGGGATATTAGTGAGCAGTCGCTCATCCAGATCTTCAAGCCATTTGG ATCTATTAAAGTGGAGTGGCCCGGCAAGGAGCAGCAGGCGGCTCAGCCCA AGGGTTATGTTTACATAATCTTTGAATCGGACAAGCAGGTCAAGGCATTA CTTTCGGCCTGTGTGCTTCAGGTGGATGATTCTCACTGTGGTAGGAACTA CTTCTTCAAAATCTCTTCGCGGCGTATTAAGTCCAAGGATGTTGAAGTCA TTCCTTGGATTATCGCTGACTCCAATTTTGTGCGATCCAGCTCCCAGAAA CTTGACCCAACGAAAACCGTGTTTGTGGGCGCACTGCATGGAAAACTGAC TGCCGAGGGCTTGGGAAATATAATGGATGATCTTTTCGACGGCGTGCTGT ATGCTGGTATAGATACGGACAAGTACAAGTACCCGATCGGATCGGGACGT GTGACATTTAGCAACTTTCGCTCCTACATGAAAGCTGTTTCGGCCGCCTT TATCGAGATTAGGACCACGAAGTTCACCAAGAAGGTGCAGGTGGATCCCT ACTTGGAGGATGCCCTATGTTCCATATGCGGTGTGCAGCACGGTCCCTAC TATTGTAGGGAATTATCGTGCTTCCGATACTTCTGCCGCAGCTGCTGGCA ATGGCAGCACAGCTGTGACATCGTCAAAAATCACAAGCCCTTGACTCGCA ACTCCAAGTCGCAGAGCCTGGTTGGCATCGGACCATCTTCGTCGAATGTT TCGTTACCCTTCTCTGGCCAACGAAGTATCAGGGACAACAGAATGGGGAA CGGTCAGCATCAACAGCACCAGCAGCATCAGTACCAACAGCAGAAACACC GTCAGCTGCAAGAATACTCGCAGCCCCACAGTCTCAACGTGATGGGAAAC TCAGGAGCTGCCAATGCCGCTGCTACATCAATGGTAACTCTTCAGCAGCG GCAAATTCACAAGGTGCGAATACAGCGTCAACAGCATCAGGCGATCTAGA CTGTTACGGCTTTTATCCACACCGTTTTAACGGATGTTTCCGCAATATAA TGTGTGAGACTTTGGACTTGTAGGCGACGTAGAAATATGGCGGAGATAGT TTTCTTGCAGCCGATGGAGACCCGGGCTCATCATCGTCATTATCATTGTA AACACAGTTTTATTGATGTGTATATAATATCGGTACAATATGAAGCTTAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19090374..19091093 | 809..90 | 3585 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 19089066..19089638 | 1948..1376 | 2865 | 100 | Minus |
chr3R | 27901430 | chr3R | 19089692..19090077 | 1376..991 | 1915 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 19090131..19090313 | 992..810 | 915 | 100 | Minus |
chr3R | 27901430 | chr3R | 19091233..19091324 | 90..1 | 380 | 96.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23266962..23267681 | 809..90 | 3585 | 99.9 | Minus |
3R | 32079331 | 3R | 23265653..23266226 | 1949..1376 | 2870 | 100 | Minus |
3R | 32079331 | 3R | 23266280..23266665 | 1376..991 | 1915 | 99.7 | Minus |
3R | 32079331 | 3R | 23266719..23266901 | 992..810 | 915 | 100 | Minus |
3R | 32079331 | 3R | 23267821..23267912 | 90..1 | 380 | 96.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23007793..23008512 | 809..90 | 3585 | 99.8 | Minus |
3R | 31820162 | 3R | 23006484..23007057 | 1949..1376 | 2870 | 100 | Minus |
3R | 31820162 | 3R | 23007111..23007496 | 1376..991 | 1915 | 99.7 | Minus |
3R | 31820162 | 3R | 23007550..23007732 | 992..810 | 915 | 100 | Minus |
3R | 31820162 | 3R | 23008652..23008743 | 90..1 | 390 | 96.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2536 | 1528..1742 | 226 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6947 | 1525..1664 | 207 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1601 | 1517..1616 | 157 | 67.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6944 | 1519..1638 | 152 | 64 | Plus |
P-element | 2907 | P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). | 2636..2731 | 100..8 | 130 | 62.5 | Minus |
hopper | 1435 | hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). | 157..199 | 4..45 | 113 | 76.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19090133..19090313 | 810..990 | 100 | <- | Minus |
chr3R | 19089692..19090077 | 991..1376 | 99 | <- | Minus |
chr3R | 19089066..19089403 | 1611..1948 | 100 | == | Minus |
chr3R | 19089460..19089637 | 1377..1554 | 100 | <- | Minus |
chr3R | 19090374..19090970 | 213..809 | 100 | == | Minus |
chr3R | 19091060..19091092 | 91..123 | 100 | <- | Minus |
chr3R | 19091233..19091278 | 45..90 | 100 | -> | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1680 | 70..1749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1680 | 70..1749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RC | 1..1680 | 70..1749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1680 | 70..1749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RC | 1..1680 | 70..1749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1950 | 1..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1950 | 1..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RC | 1..1950 | 1..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RE | 1..1950 | 1..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
orb-RC | 1..1950 | 1..1948 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23265654..23266225 | 1377..1948 | 100 | <- | Minus |
3R | 23266280..23266665 | 991..1376 | 99 | <- | Minus |
3R | 23266721..23266901 | 810..990 | 100 | <- | Minus |
3R | 23266962..23267680 | 91..809 | 99 | <- | Minus |
3R | 23267821..23267912 | 1..90 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23265654..23266225 | 1377..1948 | 100 | <- | Minus |
3R | 23266280..23266665 | 991..1376 | 99 | <- | Minus |
3R | 23266721..23266901 | 810..990 | 100 | <- | Minus |
3R | 23266962..23267680 | 91..809 | 99 | <- | Minus |
3R | 23267821..23267912 | 1..90 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23265654..23266225 | 1377..1948 | 100 | <- | Minus |
3R | 23266280..23266665 | 991..1376 | 99 | <- | Minus |
3R | 23266721..23266901 | 810..990 | 100 | <- | Minus |
3R | 23266962..23267680 | 91..809 | 99 | <- | Minus |
3R | 23267821..23267912 | 1..90 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19091376..19091947 | 1377..1948 | 100 | <- | Minus |
arm_3R | 19092002..19092387 | 991..1376 | 99 | <- | Minus |
arm_3R | 19092443..19092623 | 810..990 | 100 | <- | Minus |
arm_3R | 19092684..19093402 | 91..809 | 99 | <- | Minus |
arm_3R | 19093543..19093634 | 1..90 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23006485..23007056 | 1377..1948 | 100 | <- | Minus |
3R | 23007111..23007496 | 991..1376 | 99 | <- | Minus |
3R | 23007552..23007732 | 810..990 | 100 | <- | Minus |
3R | 23007793..23008511 | 91..809 | 99 | <- | Minus |
3R | 23008652..23008743 | 1..90 | 96 | Minus |
Translation from 69 to 1748
> AT10134.pep MAKVLRVNLLSVNSNKIPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQL QQQFVNLNRNYEQQISANLGSQQHGFEHNGVGVGASSSGNENCFSQYNLE NITSVDMELAKLQNLQRINTLKLLHAQAQQMPLINQLLQSYAGNAIGSVG GSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCDA TCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEW PGKEQQAAQPKGYVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISS RRIKSKDVEVIPWIIADSNFVRSSSQKLDPTKTVFVGALHGKLTAEGLGN IMDDLFDGVLYAGIDTDKYKYPIGSGRVTFSNFRSYMKAVSAAFIEIRTT KFTKKVQVDPYLEDALCSICGVQHGPYYCRELSCFRYFCRSCWQWQHSCD IVKNHKPLTRNSKSQSLVGIGPSSSNVSLPFSGQRSIRDNRMGNGQHQQH QQHQYQQQKHRQLQEYSQPHSLNVMGNSGAANAAATSMVTLQQRQIHKVR IQRQQHQAI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18019-PA | 966 | GF18019-PA | 374..931 | 7..538 | 2018 | 76.5 | Plus |
Dana\GF20644-PA | 237 | GF20644-PA | 1..207 | 352..538 | 724 | 71.5 | Plus |
Dana\GF10140-PA | 725 | GF10140-PA | 466..711 | 218..460 | 532 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12446-PA | 1007 | GG12446-PA | 473..1007 | 7..556 | 2166 | 84.2 | Plus |
Dere\GG15051-PA | 708 | GG15051-PA | 449..694 | 218..460 | 523 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19071-PA | 974 | GH19071-PA | 474..971 | 54..545 | 1806 | 69.1 | Plus |
Dgri\GH16131-PA | 745 | GH16131-PA | 486..731 | 218..460 | 523 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
orb-PE | 559 | CG10868-PE | 1..559 | 1..559 | 2930 | 100 | Plus |
orb-PC | 559 | CG10868-PC | 1..559 | 1..559 | 2930 | 100 | Plus |
orb-PG | 915 | CG10868-PG | 363..915 | 7..559 | 2902 | 99.8 | Plus |
orb-PF | 617 | CG10868-PF | 65..617 | 7..559 | 2902 | 99.8 | Plus |
orb-PD | 913 | CG10868-PD | 361..913 | 7..559 | 2902 | 99.8 | Plus |
orb-PB | 913 | CG10868-PB | 361..913 | 7..559 | 2902 | 99.8 | Plus |
orb-PA | 915 | CG10868-PA | 363..915 | 7..559 | 2902 | 99.8 | Plus |
orb2-PA | 551 | CG43782-PA | 292..537 | 218..460 | 502 | 40.1 | Plus |
orb2-PB | 704 | CG43782-PB | 445..690 | 218..460 | 502 | 40.1 | Plus |
orb2-PH | 704 | CG43782-PH | 445..690 | 218..460 | 502 | 40.1 | Plus |
orb2-PC | 704 | CG43782-PC | 445..690 | 218..460 | 502 | 40.1 | Plus |
orb2-PD | 704 | CG43782-PD | 445..690 | 218..460 | 502 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23215-PA | 1039 | GI23215-PA | 524..932 | 54..472 | 1814 | 79.7 | Plus |
Dmoj\GI12400-PA | 752 | GI12400-PA | 493..738 | 218..460 | 524 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23035-PA | 838 | GL23035-PA | 288..736 | 7..479 | 1825 | 77.1 | Plus |
Dper\GL20808-PA | 694 | GL20808-PA | 435..680 | 218..460 | 524 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10609-PA | 902 | GA10609-PA | 349..797 | 7..479 | 1877 | 79.1 | Plus |
Dpse\GA10609-PB | 922 | GA10609-PB | 369..817 | 7..479 | 1873 | 79.1 | Plus |
Dpse\GA19094-PA | 716 | GA19094-PA | 457..702 | 218..460 | 526 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23578-PA | 1017 | GM23578-PA | 468..1017 | 1..559 | 2589 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18393-PA | 914 | GD18393-PA | 365..914 | 1..559 | 2585 | 92.5 | Plus |
Dsim\GD12954-PA | 331 | GD12954-PA | 163..317 | 313..460 | 350 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22874-PA | 1013 | GJ22874-PA | 507..916 | 54..472 | 1806 | 79.9 | Plus |
Dvir\GJ12289-PA | 738 | GJ12289-PA | 479..724 | 218..460 | 523 | 40.1 | Plus |
Translation from 69 to 1748
> AT10134.hyp MAKVLRVNLLSVNSNKIPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQL QQQFVNLNRNYEQQISANLGSQQHGFEHNGVGVGASSSGNENCFSQYNLE NITSVDMELAKLQNLQRINTLKLLHAQAQQMPLINQLLQSYAGNAIGSVG GSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCDA TCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEW PGKEQQAAQPKGYVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISS RRIKSKDVEVIPWIIADSNFVRSSSQKLDPTKTVFVGALHGKLTAEGLGN IMDDLFDGVLYAGIDTDKYKYPIGSGRVTFSNFRSYMKAVSAAFIEIRTT KFTKKVQVDPYLEDALCSICGVQHGPYYCRELSCFRYFCRSCWQWQHSCD IVKNHKPLTRNSKSQSLVGIGPSSSNVSLPFSGQRSIRDNRMGNGQHQQH QQHQYQQQKHRQLQEYSQPHSLNVMGNSGAANAAATSMVTLQQRQIHKVR IQRQQHQAI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
orb-PE | 559 | CG10868-PE | 1..559 | 1..559 | 2930 | 100 | Plus |
orb-PC | 559 | CG10868-PC | 1..559 | 1..559 | 2930 | 100 | Plus |
orb-PG | 915 | CG10868-PG | 363..915 | 7..559 | 2902 | 99.8 | Plus |
orb-PF | 617 | CG10868-PF | 65..617 | 7..559 | 2902 | 99.8 | Plus |
orb-PD | 913 | CG10868-PD | 361..913 | 7..559 | 2902 | 99.8 | Plus |