Clone AT10134 Report

Search the DGRC for AT10134

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:101
Well:34
Vector:pOTB7
Associated Gene/Transcriptorb-RC
Protein status:AT10134.pep: gold
Preliminary Size:4860
Sequenced Size:1967

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10868 2002-09-19 Blastp of sequenced clone
CG10868 2003-01-01 Sim4 clustering to Release 3
orb 2008-04-29 Release 5.5 accounting
orb 2008-08-15 Release 5.9 accounting
orb 2008-12-18 5.12 accounting

Clone Sequence Records

AT10134.complete Sequence

1967 bp (1967 high quality bases) assembled on 2002-09-19

GenBank Submission: BT001292

> AT10134.complete
GCGTTGGTCTTTATTACAATTTATATTTTTAAAGTTTTTTTTTCAAAATT
GCAGTTTACAATAGGTATTATGGCTAAAGTTTTACGTGTGAATTTGCTGT
CTGTAAATAGCAACAAAATTCCACATCAACAACAGCAACAACAACAGCAG
CAGCAGCAACAACAGCAGCAGCAACAACAGAATCAGCAGCAATTGCAGGT
TCAGCAACAACATCAGTTGCAGCAGCAGTTTGTTAACCTAAACAGGAACT
ACGAGCAACAGATATCTGCCAATTTGGGTAGCCAACAACATGGGTTCGAG
CACAACGGCGTGGGTGTGGGTGCTTCTAGTAGCGGAAATGAGAACTGCTT
TAGCCAGTATAATCTAGAAAACATCACCAGTGTGGACATGGAGCTGGCCA
AACTGCAGAATTTGCAACGCATCAACACGCTAAAGCTCCTGCATGCCCAA
GCTCAACAAATGCCGCTGATCAACCAGCTCCTGCAGAGCTATGCCGGCAA
CGCCATAGGCAGCGTCGGTGGAAGCAATCTTGGTAACTTGATGAGCGCAG
GCGGATCATCACTGATGACAGAAATGGCGGGAAACGTTGGCGGCATTATA
ACCACCAACGATGGCCACCTGGATCGCGTAGCTAAGTTCTATAAGAGTTC
GGCTGCCCTGTGCGATGCCACATGCACATGGAGTGGACACCTGCCGCCGC
GTTCGCACCGTATGCTCAACTATTCTCCCAAGGTCTTCCTCGGCGGGATT
CCCTGGGATATTAGTGAGCAGTCGCTCATCCAGATCTTCAAGCCATTTGG
ATCTATTAAAGTGGAGTGGCCCGGCAAGGAGCAGCAGGCGGCTCAGCCCA
AGGGTTATGTTTACATAATCTTTGAATCGGACAAGCAGGTCAAGGCATTA
CTTTCGGCCTGTGTGCTTCAGGTGGATGATTCTCACTGTGGTAGGAACTA
CTTCTTCAAAATCTCTTCGCGGCGTATTAAGTCCAAGGATGTTGAAGTCA
TTCCTTGGATTATCGCTGACTCCAATTTTGTGCGATCCAGCTCCCAGAAA
CTTGACCCAACGAAAACCGTGTTTGTGGGCGCACTGCATGGAAAACTGAC
TGCCGAGGGCTTGGGAAATATAATGGATGATCTTTTCGACGGCGTGCTGT
ATGCTGGTATAGATACGGACAAGTACAAGTACCCGATCGGATCGGGACGT
GTGACATTTAGCAACTTTCGCTCCTACATGAAAGCTGTTTCGGCCGCCTT
TATCGAGATTAGGACCACGAAGTTCACCAAGAAGGTGCAGGTGGATCCCT
ACTTGGAGGATGCCCTATGTTCCATATGCGGTGTGCAGCACGGTCCCTAC
TATTGTAGGGAATTATCGTGCTTCCGATACTTCTGCCGCAGCTGCTGGCA
ATGGCAGCACAGCTGTGACATCGTCAAAAATCACAAGCCCTTGACTCGCA
ACTCCAAGTCGCAGAGCCTGGTTGGCATCGGACCATCTTCGTCGAATGTT
TCGTTACCCTTCTCTGGCCAACGAAGTATCAGGGACAACAGAATGGGGAA
CGGTCAGCATCAACAGCACCAGCAGCATCAGTACCAACAGCAGAAACACC
GTCAGCTGCAAGAATACTCGCAGCCCCACAGTCTCAACGTGATGGGAAAC
TCAGGAGCTGCCAATGCCGCTGCTACATCAATGGTAACTCTTCAGCAGCG
GCAAATTCACAAGGTGCGAATACAGCGTCAACAGCATCAGGCGATCTAGA
CTGTTACGGCTTTTATCCACACCGTTTTAACGGATGTTTCCGCAATATAA
TGTGTGAGACTTTGGACTTGTAGGCGACGTAGAAATATGGCGGAGATAGT
TTTCTTGCAGCCGATGGAGACCCGGGCTCATCATCGTCATTATCATTGTA
AACACAGTTTTATTGATGTGTATATAATATCGGTACAATATGAAGCTTAA
AAAAAAAAAAAAAAAAA

AT10134.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
orb-RC 1964 orb-RC 1..1951 1..1949 9655 99.7 Plus
orb-RE 1964 orb-RE 1..1951 1..1949 9655 99.7 Plus
orb-RA 5037 orb-RA 2156..4014 91..1949 9265 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19090374..19091093 809..90 3585 99.9 Minus
chr3R 27901430 chr3R 19089066..19089638 1948..1376 2865 100 Minus
chr3R 27901430 chr3R 19089692..19090077 1376..991 1915 99.7 Minus
chr3R 27901430 chr3R 19090131..19090313 992..810 915 100 Minus
chr3R 27901430 chr3R 19091233..19091324 90..1 380 96.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:44:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:34:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23266962..23267681 809..90 3585 99.9 Minus
3R 32079331 3R 23265653..23266226 1949..1376 2870 100 Minus
3R 32079331 3R 23266280..23266665 1376..991 1915 99.7 Minus
3R 32079331 3R 23266719..23266901 992..810 915 100 Minus
3R 32079331 3R 23267821..23267912 90..1 380 96.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23007793..23008512 809..90 3585 99.8 Minus
3R 31820162 3R 23006484..23007057 1949..1376 2870 100 Minus
3R 31820162 3R 23007111..23007496 1376..991 1915 99.7 Minus
3R 31820162 3R 23007550..23007732 992..810 915 100 Minus
3R 31820162 3R 23008652..23008743 90..1 390 96.7 Minus
Blast to na_te.dros performed 2019-03-15 23:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2323..2536 1528..1742 226 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6810..6947 1525..1664 207 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1506..1601 1517..1616 157 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6824..6944 1519..1638 152 64 Plus
P-element 2907 P-element PPI251 2907bp AKA(V01520,X69493) Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8). 2636..2731 100..8 130 62.5 Minus
hopper 1435 hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11). 157..199 4..45 113 76.7 Plus

AT10134.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:35:27 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19090133..19090313 810..990 100 <- Minus
chr3R 19089692..19090077 991..1376 99 <- Minus
chr3R 19089066..19089403 1611..1948 100 == Minus
chr3R 19089460..19089637 1377..1554 100 <- Minus
chr3R 19090374..19090970 213..809 100 == Minus
chr3R 19091060..19091092 91..123 100 <- Minus
chr3R 19091233..19091278 45..90 100 -> Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:58:40 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1680 70..1749 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:14:41 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1680 70..1749 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:43:11 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RC 1..1680 70..1749 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:05:41 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1680 70..1749 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:40:21 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RC 1..1680 70..1749 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:37:54 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1950 1..1948 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:14:41 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1950 1..1948 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:43:11 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RC 1..1950 1..1948 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:05:42 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RE 1..1950 1..1948 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:40:21 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
orb-RC 1..1950 1..1948 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:27 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23265654..23266225 1377..1948 100 <- Minus
3R 23266280..23266665 991..1376 99 <- Minus
3R 23266721..23266901 810..990 100 <- Minus
3R 23266962..23267680 91..809 99 <- Minus
3R 23267821..23267912 1..90 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:27 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23265654..23266225 1377..1948 100 <- Minus
3R 23266280..23266665 991..1376 99 <- Minus
3R 23266721..23266901 810..990 100 <- Minus
3R 23266962..23267680 91..809 99 <- Minus
3R 23267821..23267912 1..90 96   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:35:27 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23265654..23266225 1377..1948 100 <- Minus
3R 23266280..23266665 991..1376 99 <- Minus
3R 23266721..23266901 810..990 100 <- Minus
3R 23266962..23267680 91..809 99 <- Minus
3R 23267821..23267912 1..90 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:43:11 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19091376..19091947 1377..1948 100 <- Minus
arm_3R 19092002..19092387 991..1376 99 <- Minus
arm_3R 19092443..19092623 810..990 100 <- Minus
arm_3R 19092684..19093402 91..809 99 <- Minus
arm_3R 19093543..19093634 1..90 96   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:37:32 Download gff for AT10134.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23006485..23007056 1377..1948 100 <- Minus
3R 23007111..23007496 991..1376 99 <- Minus
3R 23007552..23007732 810..990 100 <- Minus
3R 23007793..23008511 91..809 99 <- Minus
3R 23008652..23008743 1..90 96   Minus

AT10134.pep Sequence

Translation from 69 to 1748

> AT10134.pep
MAKVLRVNLLSVNSNKIPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQL
QQQFVNLNRNYEQQISANLGSQQHGFEHNGVGVGASSSGNENCFSQYNLE
NITSVDMELAKLQNLQRINTLKLLHAQAQQMPLINQLLQSYAGNAIGSVG
GSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCDA
TCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEW
PGKEQQAAQPKGYVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISS
RRIKSKDVEVIPWIIADSNFVRSSSQKLDPTKTVFVGALHGKLTAEGLGN
IMDDLFDGVLYAGIDTDKYKYPIGSGRVTFSNFRSYMKAVSAAFIEIRTT
KFTKKVQVDPYLEDALCSICGVQHGPYYCRELSCFRYFCRSCWQWQHSCD
IVKNHKPLTRNSKSQSLVGIGPSSSNVSLPFSGQRSIRDNRMGNGQHQQH
QQHQYQQQKHRQLQEYSQPHSLNVMGNSGAANAAATSMVTLQQRQIHKVR
IQRQQHQAI*

AT10134.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18019-PA 966 GF18019-PA 374..931 7..538 2018 76.5 Plus
Dana\GF20644-PA 237 GF20644-PA 1..207 352..538 724 71.5 Plus
Dana\GF10140-PA 725 GF10140-PA 466..711 218..460 532 40.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12446-PA 1007 GG12446-PA 473..1007 7..556 2166 84.2 Plus
Dere\GG15051-PA 708 GG15051-PA 449..694 218..460 523 40.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19071-PA 974 GH19071-PA 474..971 54..545 1806 69.1 Plus
Dgri\GH16131-PA 745 GH16131-PA 486..731 218..460 523 40.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:31
Subject Length Description Subject Range Query Range Score Percent Strand
orb-PE 559 CG10868-PE 1..559 1..559 2930 100 Plus
orb-PC 559 CG10868-PC 1..559 1..559 2930 100 Plus
orb-PG 915 CG10868-PG 363..915 7..559 2902 99.8 Plus
orb-PF 617 CG10868-PF 65..617 7..559 2902 99.8 Plus
orb-PD 913 CG10868-PD 361..913 7..559 2902 99.8 Plus
orb-PB 913 CG10868-PB 361..913 7..559 2902 99.8 Plus
orb-PA 915 CG10868-PA 363..915 7..559 2902 99.8 Plus
orb2-PA 551 CG43782-PA 292..537 218..460 502 40.1 Plus
orb2-PB 704 CG43782-PB 445..690 218..460 502 40.1 Plus
orb2-PH 704 CG43782-PH 445..690 218..460 502 40.1 Plus
orb2-PC 704 CG43782-PC 445..690 218..460 502 40.1 Plus
orb2-PD 704 CG43782-PD 445..690 218..460 502 40.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23215-PA 1039 GI23215-PA 524..932 54..472 1814 79.7 Plus
Dmoj\GI12400-PA 752 GI12400-PA 493..738 218..460 524 40.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23035-PA 838 GL23035-PA 288..736 7..479 1825 77.1 Plus
Dper\GL20808-PA 694 GL20808-PA 435..680 218..460 524 40.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10609-PA 902 GA10609-PA 349..797 7..479 1877 79.1 Plus
Dpse\GA10609-PB 922 GA10609-PB 369..817 7..479 1873 79.1 Plus
Dpse\GA19094-PA 716 GA19094-PA 457..702 218..460 526 40.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23578-PA 1017 GM23578-PA 468..1017 1..559 2589 92.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18393-PA 914 GD18393-PA 365..914 1..559 2585 92.5 Plus
Dsim\GD12954-PA 331 GD12954-PA 163..317 313..460 350 43.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22874-PA 1013 GJ22874-PA 507..916 54..472 1806 79.9 Plus
Dvir\GJ12289-PA 738 GJ12289-PA 479..724 218..460 523 40.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11581-PA 909 GK11581-PA 343..817 7..479 1895 77.6 Plus
Dwil\GK17460-PA 753 GK17460-PA 494..739 218..460 525 40.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23969-PA 1014 GE23969-PA 473..1014 7..556 2167 83.2 Plus
Dyak\GE21274-PA 709 GE21274-PA 450..695 218..460 524 40.1 Plus

AT10134.hyp Sequence

Translation from 69 to 1748

> AT10134.hyp
MAKVLRVNLLSVNSNKIPHQQQQQQQQQQQQQQQQQQNQQQLQVQQQHQL
QQQFVNLNRNYEQQISANLGSQQHGFEHNGVGVGASSSGNENCFSQYNLE
NITSVDMELAKLQNLQRINTLKLLHAQAQQMPLINQLLQSYAGNAIGSVG
GSNLGNLMSAGGSSLMTEMAGNVGGIITTNDGHLDRVAKFYKSSAALCDA
TCTWSGHLPPRSHRMLNYSPKVFLGGIPWDISEQSLIQIFKPFGSIKVEW
PGKEQQAAQPKGYVYIIFESDKQVKALLSACVLQVDDSHCGRNYFFKISS
RRIKSKDVEVIPWIIADSNFVRSSSQKLDPTKTVFVGALHGKLTAEGLGN
IMDDLFDGVLYAGIDTDKYKYPIGSGRVTFSNFRSYMKAVSAAFIEIRTT
KFTKKVQVDPYLEDALCSICGVQHGPYYCRELSCFRYFCRSCWQWQHSCD
IVKNHKPLTRNSKSQSLVGIGPSSSNVSLPFSGQRSIRDNRMGNGQHQQH
QQHQYQQQKHRQLQEYSQPHSLNVMGNSGAANAAATSMVTLQQRQIHKVR
IQRQQHQAI*

AT10134.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:01:24
Subject Length Description Subject Range Query Range Score Percent Strand
orb-PE 559 CG10868-PE 1..559 1..559 2930 100 Plus
orb-PC 559 CG10868-PC 1..559 1..559 2930 100 Plus
orb-PG 915 CG10868-PG 363..915 7..559 2902 99.8 Plus
orb-PF 617 CG10868-PF 65..617 7..559 2902 99.8 Plus
orb-PD 913 CG10868-PD 361..913 7..559 2902 99.8 Plus