BDGP Sequence Production Resources |
Search the DGRC for AT10251
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 102 |
Well: | 51 |
Vector: | pOTB7 |
Associated Gene/Transcript | mod(r)-RB |
Protein status: | AT10251.pep: gold |
Sequenced Size: | 1080 |
Gene | Date | Evidence |
---|---|---|
mod(r)-RB | 2010-02-12 | Manual selection by Ken Wan |
1080 bp assembled on 2010-03-02
GenBank Submission: BT122033.1
> AT10251.complete CAGACACATTGACATTCGAAAATTGGGATTGAAAACTCAAGATGCCGACT ACACCACAGGATCTTGCCCTTGCCCACTCTCTTGCTCAAAGACCTCCGAC CGATAGCAGTGAGGCCAAGGAGCAGGAGGCCGGCGAATCGGACAACCTGC CCAACCTGTGCACTTTGTCGCTGGACGAACTGAAACAGCTGGACAGGGAT CCCGAGTTCTTCGAGGACTTCATCGAGGAGATGTCCGTGGTGCAGTACCT GAACGAGGAGCTCGATTCAATGATGGACCAGGTGGAGATTATATCAAGAG AGAACGAGTGCAAGGGCATTCATCTGGTAGAGCTGAAGCGCCGACTCAGC GACGATTTTACAGCTTTAAAAAACCTAGGCGAGAAATGCGACCGGCTGAA CAAGAAGTACTTCAAGAAGTCGGATGAATACGCGCCTCAGCATATCAGGA TTGCAGCTTCCAATGCCGATGGCGACTGCGATCGTCACGTGGAGCACTTC CTGAACGGAAAGACCGACGTGCAGACTTTCCTCAACACGTACCAGTGGTC GAAGAAGATCAGTACCGAGCGCAAGGCCAAAGAGGAGCGCCTGGGCACCC AGCTCAGTGCTCTGGAGCGGGCCGGTATCTAGGATTGCCGTGACACTCCC TGGCCGTGCCATCCAGAGCACGGTCCTCCCACTCCTCGCACTCCTCCCAC ACCGCCACGATCCGCGTCGCAATAGTAGAGAATATCAATGTTAGTAAATA GAGAAGTTAAGCCAGAGATGGGGCGACATAATCATGGCACACACGGCCAC GCATTCCCAGAACAGAAAGCAAAACCTTGTTGAAGTAATAAGAAGGTGCA CTAGTTGTTCGTTTCCCAAGATCGTTTACTTGGGAAGAGGGTCTTGTTAT TCTATCCGTACCCCGAAACGAAGCACTATGTGCAACAGAACGCAGTCCGG AATCGCATGTATTACCTATTTACTTTTTTTCCTTTTGGTTAATCGTGAGC CCCATCCATATATTCTCTCCATATATACATATATATTAAAAAAAAACTAT GCTTTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mod(r)-RD | 1371 | mod(r)-RD | 306..1363 | 1..1058 | 5290 | 100 | Plus |
mod(r)-RC | 1372 | mod(r)-RC | 755..1364 | 449..1058 | 3050 | 100 | Plus |
mod(r)-RA | 1355 | mod(r)-RA | 750..1355 | 449..1054 | 3030 | 100 | Plus |
mod(r)-RA | 1355 | mod(r)-RA | 290..738 | 1..449 | 2245 | 100 | Plus |
mod(r)-RC | 1372 | mod(r)-RC | 297..743 | 3..449 | 2235 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 516438..517044 | 449..1055 | 3035 | 100 | Plus |
chrX | 22417052 | chrX | 515843..516144 | 1..302 | 1495 | 99.7 | Plus |
chrX | 22417052 | chrX | 516200..516351 | 298..449 | 760 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 515843..516139 | 1..297 | 100 | -> | Plus |
chrX | 516200..516351 | 298..449 | 100 | -> | Plus |
chrX | 516439..517044 | 450..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 1..591 | 42..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 1..591 | 42..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 1..591 | 42..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 1..591 | 42..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RD | 271..1322 | 1..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RD | 271..1322 | 1..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 45..1099 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mod(r)-RB | 45..1099 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 621850..622146 | 1..297 | 100 | -> | Plus |
X | 622207..622358 | 298..449 | 100 | -> | Plus |
X | 622446..623051 | 450..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 621850..622146 | 1..297 | 100 | -> | Plus |
X | 622207..622358 | 298..449 | 100 | -> | Plus |
X | 622446..623051 | 450..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 621850..622146 | 1..297 | 100 | -> | Plus |
X | 622207..622358 | 298..449 | 100 | -> | Plus |
X | 622446..623051 | 450..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 515883..516179 | 1..297 | 100 | -> | Plus |
arm_X | 516240..516391 | 298..449 | 100 | -> | Plus |
arm_X | 516479..517084 | 450..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 629948..630244 | 1..297 | 100 | -> | Plus |
X | 630305..630456 | 298..449 | 100 | -> | Plus |
X | 630544..631149 | 450..1055 | 100 | Plus |
Translation from 41 to 631
> AT10251.hyp MPTTPQDLALAHSLAQRPPTDSSEAKEQEAGESDNLPNLCTLSLDELKQL DRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR RLSDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRIAASNADGDCDRHV EHFLNGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLSALERAGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mod(r)-PE | 196 | CG17828-PE | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PD | 196 | CG17828-PD | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PB | 196 | CG17828-PB | 1..196 | 1..196 | 1016 | 100 | Plus |
mod(r)-PF | 200 | CG17828-PF | 1..200 | 1..196 | 1001 | 98 | Plus |
mod(r)-PC | 200 | CG17828-PC | 1..200 | 1..196 | 1001 | 98 | Plus |
Translation from 41 to 631
> AT10251.pep MPTTPQDLALAHSLAQRPPTDSSEAKEQEAGESDNLPNLCTLSLDELKQL DRDPEFFEDFIEEMSVVQYLNEELDSMMDQVEIISRENECKGIHLVELKR RLSDDFTALKNLGEKCDRLNKKYFKKSDEYAPQHIRIAASNADGDCDRHV EHFLNGKTDVQTFLNTYQWSKKISTERKAKEERLGTQLSALERAGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22102-PA | 216 | GF22102-PA | 27..216 | 11..196 | 762 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12797-PA | 203 | GG12797-PA | 1..203 | 1..196 | 840 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24324-PA | 194 | GH24324-PA | 28..194 | 34..196 | 742 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vsp37A-PE | 196 | CG17828-PE | 1..196 | 1..196 | 1016 | 100 | Plus |
Vsp37A-PD | 196 | CG17828-PD | 1..196 | 1..196 | 1016 | 100 | Plus |
Vsp37A-PB | 196 | CG17828-PB | 1..196 | 1..196 | 1016 | 100 | Plus |
Vsp37A-PF | 200 | CG17828-PF | 1..200 | 1..196 | 1001 | 98 | Plus |
Vsp37A-PC | 200 | CG17828-PC | 1..200 | 1..196 | 1001 | 98 | Plus |
Vsp37A-PA | 200 | CG17828-PA | 1..200 | 1..196 | 1001 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14804-PA | 205 | GI14804-PA | 37..205 | 32..196 | 756 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21382-PA | 201 | GL21382-PA | 36..201 | 35..196 | 758 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14686-PA | 201 | GA14686-PA | 36..201 | 35..196 | 758 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19076-PA | 200 | GM19076-PA | 1..200 | 1..196 | 1006 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16515-PA | 200 | GD16515-PA | 1..200 | 1..196 | 1012 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19471-PA | 198 | GJ19471-PA | 30..198 | 32..196 | 759 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16437-PA | 205 | GK16437-PA | 36..205 | 31..196 | 746 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16623-PA | 203 | GE16623-PA | 1..203 | 1..196 | 855 | 82.3 | Plus |