Clone AT10584 Report

Search the DGRC for AT10584

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:105
Well:84
Vector:pOTB7
Associated Gene/TranscriptMulk-RA
Protein status:AT10584.pep: gold
Preliminary Size:1258
Sequenced Size:1274

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18162 2002-01-01 Sim4 clustering to Release 2
CG31873 2002-05-15 Blastp of sequenced clone
CG31873 2003-01-01 Sim4 clustering to Release 3
CG31873 2008-04-29 Release 5.5 accounting
CG31873 2008-08-15 Release 5.9 accounting
CG31873 2008-12-18 5.12 accounting

Clone Sequence Records

AT10584.complete Sequence

1274 bp (1274 high quality bases) assembled on 2002-05-15

GenBank Submission: AY118682

> AT10584.complete
AATCATCGGTCGAAATTGAAAATATGAATTATTTAAGAGTAATTCGGAAT
AATTGGAAGAAATGCACGTTCGGAGCGGCAGTGTCTGTGTATGCGCTGCA
AGCGCTGAAAACTCACATCGAGATTGAACAACATATGCGGGAATTCGCCT
CCAACATTCAGGCCAACTGGATATCGGATCGCCCCAAAAAGGTACTGGTG
GTCATGAATCCGGTGGCCAACAAGAAGAGATCGGAGAAGTTTTTTAAGAA
CTACTGCGAGCCGGTTTTGCATTTAGCTGGATATTCGGTGGAGATCCTTC
GGACGAATCACATTGGTCATGCCAAAACCTACGTGGAGGAGTTGGCAACG
CTACCCGATGCCATTGTTGTTGCCGGCGGCGACGGCACCTCATCGGAGGT
GGTCACTGGGCTGATGCGTAGGCGCGGCAATCTCTGCCCGATCACCATCC
TTCCGCTGGGACGTTCGGTGCAGTCCGCATCCAAGCGCATCAACATCTTT
GGCGTCAAGGACGTCGACTATGTGAAAAGTCTTTCGAAAGCCCTTGAACC
TATGCTCAAGGATGAGAGCCAGTACCAGAGTGTGATCCGCTTTGATGTGA
TCAATGAAGAAGATGGCAGCAATAGCCAATTGAAGCCCATATTCGGTCTT
AATGGTCTGTCCTGGGGTCTGCTGGAGGACATCGATGCGGCAAAGGATAA
GTACTGGTACTTTGGACCACTGCGACACTACGCTTCCGCTGCGTCCAAGT
CCTTTGCCGATAACTGGAGCCTTAAGACCGACTATGTGTACACACCGCCG
TGTCCTGGCTGCGTTGACTGTGCTGCTACTGTACAGCGCCAGGAGACCGC
CCAGCCTTCTGGCCTCTTCACCAGAGGCCTCATTAAGTACAAGAATAATC
CGGGTGAAACCAAGAGGCCGCTAGTCAAGAACGACAATTGCAGCAAGAAG
TTCGAGGGAAGCGCTGAAGCCAGCCAGATAAACATCAATTGTGTTCAAAA
CAAGGATAACTTTGCGGAGCTGGAAAGTCAGTTTATAAGCTCCCTGCAGC
CGGGCTGGGAGTTTATCAAACAAATTCCGGAAGTCACGTGCAGCAAAATT
TTACCCAGCTTGGTGGTTAAGAGCAGGACTATTCAACTGCATCCGGATGG
TGAAATGGGCGAGAAGTTTTACTCCATCGATGGCGAGGAGTATGATGCAA
GACCCATTAAGGTATCTGTTGTTCCCAATGCTATTAAAGTTTTTTGTTGA
CATTTTAAAAAAAAAAAAAAAAAA

AT10584.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31873-RA 1361 CG31873-RA 69..1327 1..1259 6190 99.4 Plus
CG31873.a 2142 CG31873.a 69..1279 1..1211 5950 99.4 Plus
CG31873.b 1300 CG31873.b 287..1300 243..1256 4995 99.5 Plus
CG31873.b 1300 CG31873.b 37..278 1..242 1180 99.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10269305..10270318 243..1256 4995 99.5 Plus
chr2L 23010047 chr2L 10269130..10269250 122..242 605 100 Plus
chr2L 23010047 chr2L 10268948..10269069 1..122 580 98.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:45:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10270449..10271465 243..1259 5010 99.5 Plus
2L 23513712 2L 10270274..10270394 122..242 605 100 Plus
2L 23513712 2L 10270092..10270213 1..122 580 98.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10270449..10271465 243..1259 5010 99.5 Plus
2L 23513712 2L 10270274..10270394 122..242 605 100 Plus
2L 23513712 2L 10270092..10270213 1..122 580 98.3 Plus
Blast to na_te.dros performed on 2019-03-15 17:54:06 has no hits.

AT10584.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:55:08 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10268948..10269068 1..121 98 -> Plus
chr2L 10269130..10269250 122..242 100 -> Plus
chr2L 10269305..10270318 243..1256 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:59:03 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 1..1227 24..1250 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:52:10 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 1..1227 24..1250 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:49:56 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
Mulk-RA 1..1227 24..1250 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:44:49 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 1..1227 24..1250 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:54 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
Mulk-RA 1..1227 24..1250 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:30:16 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 2..1257 1..1256 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:52:10 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 26..1281 1..1256 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:49:56 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
Mulk-RA 42..1297 1..1256 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:44:49 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
CG31873-RA 2..1257 1..1256 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:54 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
Mulk-RA 42..1297 1..1256 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:08 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10270092..10270212 1..121 98 -> Plus
2L 10270274..10270394 122..242 100 -> Plus
2L 10270449..10271462 243..1256 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:08 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10270092..10270212 1..121 98 -> Plus
2L 10270274..10270394 122..242 100 -> Plus
2L 10270449..10271462 243..1256 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:55:08 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10270092..10270212 1..121 98 -> Plus
2L 10270274..10270394 122..242 100 -> Plus
2L 10270449..10271462 243..1256 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:49:56 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10270092..10270212 1..121 98 -> Plus
arm_2L 10270274..10270394 122..242 100 -> Plus
arm_2L 10270449..10271462 243..1256 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:17:09 Download gff for AT10584.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10270449..10271462 243..1256 99   Plus
2L 10270092..10270212 1..121 98 -> Plus
2L 10270274..10270394 122..242 100 -> Plus

AT10584.hyp Sequence

Translation from 2 to 1249

> AT10584.hyp
SSVEIENMNYLRVIRNNWKKCTFGAAVSVYALQALKTHIEIEQHMREFAS
NIQANWISDRPKKVLVVMNPVANKKRSEKFFKNYCEPVLHLAGYSVEILR
TNHIGHAKTYVEELATLPDAIVVAGGDGTSSEVVTGLMRRRGNLCPITIL
PLGRSVQSASKRINIFGVKDVDYVKSLSKALEPMLKDESQYQSVIRFDVI
NEEDGSNSQLKPIFGLNGLSWGLLEDIDAAKDKYWYFGPLRHYASAASKS
FADNWSLKTDYVYTPPCPGCVDCAATVQRQETAQPSGLFTRGLIKYKNNP
GETKRPLVKNDNCSKKFEGSAEASQININCVQNKDNFAELESQFISSLQP
GWEFIKQIPEVTCSKILPSLVVKSRTIQLHPDGEMGEKFYSIDGEEYDAR
PIKVSVVPNAIKVFC*

AT10584.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
Mulk-PA 408 CG31873-PA 1..408 8..415 2141 100 Plus

AT10584.pep Sequence

Translation from 23 to 1249

> AT10584.pep
MNYLRVIRNNWKKCTFGAAVSVYALQALKTHIEIEQHMREFASNIQANWI
SDRPKKVLVVMNPVANKKRSEKFFKNYCEPVLHLAGYSVEILRTNHIGHA
KTYVEELATLPDAIVVAGGDGTSSEVVTGLMRRRGNLCPITILPLGRSVQ
SASKRINIFGVKDVDYVKSLSKALEPMLKDESQYQSVIRFDVINEEDGSN
SQLKPIFGLNGLSWGLLEDIDAAKDKYWYFGPLRHYASAASKSFADNWSL
KTDYVYTPPCPGCVDCAATVQRQETAQPSGLFTRGLIKYKNNPGETKRPL
VKNDNCSKKFEGSAEASQININCVQNKDNFAELESQFISSLQPGWEFIKQ
IPEVTCSKILPSLVVKSRTIQLHPDGEMGEKFYSIDGEEYDARPIKVSVV
PNAIKVFC*

AT10584.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15762-PA 408 GF15762-PA 1..408 1..408 1745 76.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10103-PA 408 GG10103-PA 1..408 1..408 2099 93.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13359-PA 411 GH13359-PA 1..411 1..408 1191 53.6 Plus
Dgri\GH23414-PA 224 GH23414-PA 1..223 170..391 577 49.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
Mulk-PA 408 CG31873-PA 1..408 1..408 2141 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10650-PA 227 GI10650-PA 1..223 1..218 644 54.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18978-PA 406 GL18978-PA 1..406 1..408 1408 66 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16541-PA 406 GA16541-PA 1..406 1..408 1409 66 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18115-PA 499 GM18115-PA 1..278 1..278 1477 97.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18113-PA 409 GJ18113-PA 1..409 1..408 1246 55.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18607-PA 272 GK18607-PA 1..176 74..245 511 55.9 Plus
Dwil\GK19003-PA 91 GK19003-PA 1..74 1..72 161 44.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18916-PA 408 GE18916-PA 1..408 1..408 2112 94.9 Plus