Clone AT10995 Report

Search the DGRC for AT10995

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:109
Well:95
Vector:pOTB7
Associated Gene/TranscriptCG5623-RA
Protein status:AT10995.pep: gold
Preliminary Size:660
Sequenced Size:1151

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5623 2002-01-01 Sim4 clustering to Release 2
CG5623 2002-02-22 Blastp of sequenced clone
CG5623 2003-01-01 Sim4 clustering to Release 3
CG5623 2008-04-29 Release 5.5 accounting
CG5623 2008-08-15 Release 5.9 accounting
CG5623 2008-12-18 5.12 accounting

Clone Sequence Records

AT10995.complete Sequence

1151 bp (1151 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089306

> AT10995.complete
CAACATTTGTTTCTAAATTTATTGTGAATACTAGTTGTGATTAAACTGAC
CAAATATGTGTGAAATAAAGCAAAATTTCGTGACACACGATCTGGTGCAC
AATCTGCGTTGCAATAAGCGCAGTCCGAAGGTTCGGCACCTCATGAAAAA
GACAAGAGCCTGGCCCGGAGCGCGATTTATGTGCGTTTGTAAGGAGGGAG
ACTTGAATACGGCTGCATATTGTTTGGCCGAGTTGATGCACGAGCCGTTC
CAGCCATTTCCCATGGCCACCGTGGCAGTGCATCATTCGATCCGGGACGA
GTTCATCGAGAGGGTGAGGAGTCGGTTCAGGCAGCTAAAGCCACATGTGG
CCAATCATCCGAATTTCATAAGAGCCGTTAATGAGCTAAAGTATGGGTTG
CGACCAGTGAAATATATTCTGGCCGATGTGGCCGATGCTCCGGCCTGCGC
CAGTCCCATCTTGGTGACGGGAGGCGTCACCCACTTGTTCTTTCCCAGCG
GACCCTCGGGATGTACCACCCTGCATACCTTCAGTAGCATGCGGGAGGTG
GCGCTGATCTTTGGCAAGGAGACGCCCAAATTCGATGCGGTCTACTTCTT
CGATGAGACCATCACAGGTGTCTACATCTTGGCCAAGCTCATCAATTGTG
TGCAGTTCTTTGTGAACTGCATGGATGCCTGCCTGATGGAGATTATGCCC
CACTACTTGGACCACACGCCCATGGTGGTCTACAAGCGAGGTTATCACTA
CGAGACCCTGGAACTTGACCAGCAGTGGAAGATCATCGTGTTCCCCTACA
GCACCTCCATTCTGAGGCAGTGCTGCTGTCCCACTGGCCAGTGCCGTTGC
TATGCCACCCATACGGCCTGCTGTGAGGATCATTTGCAGAGTTAGGGAAT
GCAGGATGTGCCCAGCCCACTCCGAGCCACTCCTGCTGGTAATTTCGACT
TGGAACTCCATCTTGGCAAAGGAAATCAGAACTTCCTCCGTCTGTTCTTC
GACTGCCGGCGTCGCTCCAGAAATCCTCAGTTCCAATGAGTAGTTTGCGA
CTGGCAACACATGTGAGCCATAATTTTCGCGGTACTTGCCTCTTGGATTG
CAAATAAAGTGGTTATTGGCTGTGGTGAAAAAAAAAAAAAAAAAAAAAAA
A

AT10995.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5623-RA 1176 CG5623-RA 14..1142 1..1129 5525 99.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11590866..11591859 1127..134 4955 99.9 Minus
chr3R 27901430 chr3R 11591926..11592058 133..1 665 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:45:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15766244..15767239 1129..134 4875 99.3 Minus
3R 32079331 3R 15767306..15767438 133..1 650 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15507075..15508070 1129..134 4875 99.2 Minus
3R 31820162 3R 15508137..15508269 133..1 650 99.2 Minus
Blast to na_te.dros performed on 2019-03-16 18:43:13 has no hits.

AT10995.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:44:19 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11590866..11591859 134..1127 99 <- Minus
chr3R 11591926..11592058 1..133 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:59:20 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..840 56..895 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:41:40 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..840 56..895 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:24:46 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..840 56..895 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:10:46 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..840 56..895 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:54 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..840 56..895 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:06:29 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..1127 1..1127 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:41:40 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..1127 1..1127 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:24:46 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..1127 1..1127 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:10:46 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..1127 1..1127 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:54 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
CG5623-RA 1..1127 1..1127 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:19 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15766246..15767239 134..1127 99 <- Minus
3R 15767306..15767438 1..133 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:19 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15766246..15767239 134..1127 99 <- Minus
3R 15767306..15767438 1..133 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:44:19 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15766246..15767239 134..1127 99 <- Minus
3R 15767306..15767438 1..133 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:46 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11591968..11592961 134..1127 99 <- Minus
arm_3R 11593028..11593160 1..133 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:45:09 Download gff for AT10995.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15507077..15508070 134..1127 99 <- Minus
3R 15508137..15508269 1..133 99   Minus

AT10995.pep Sequence

Translation from 55 to 894

> AT10995.pep
MCEIKQNFVTHDLVHNLRCNKRSPKVRHLMKKTRAWPGARFMCVCKEGDL
NTAAYCLAELMHEPFQPFPMATVAVHHSIRDEFIERVRSRFRQLKPHVAN
HPNFIRAVNELKYGLRPVKYILADVADAPACASPILVTGGVTHLFFPSGP
SGCTTLHTFSSMREVALIFGKETPKFDAVYFFDETITGVYILAKLINCVQ
FFVNCMDACLMEIMPHYLDHTPMVVYKRGYHYETLELDQQWKIIVFPYST
SILRQCCCPTGQCRCYATHTACCEDHLQS*

AT10995.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:49:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16480-PA 279 GF16480-PA 1..279 1..279 1103 69.9 Plus
Dana\GF18368-PA 320 GF18368-PA 98..309 36..250 300 32.1 Plus
Dana\GF16130-PA 294 GF16130-PA 76..290 35..250 265 31.2 Plus
Dana\GF21319-PA 253 GF21319-PA 13..249 7..250 224 25.5 Plus
Dana\GF21501-PA 310 GF21501-PA 65..294 18..255 215 26.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20399-PA 279 GG20399-PA 1..279 1..279 1367 88.5 Plus
Dere\GG13512-PA 316 GG13512-PA 92..303 36..250 318 33 Plus
Dere\GG21350-PA 296 GG21350-PA 32..275 9..253 301 31.7 Plus
Dere\GG12073-PA 291 GG12073-PA 73..287 35..250 248 29.8 Plus
Dere\GG17756-PA 256 GG17756-PA 18..252 9..250 230 26 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19385-PA 273 GH19385-PA 1..273 1..274 785 55.3 Plus
Dgri\GH10452-PA 306 GH10452-PA 36..289 9..255 299 31.9 Plus
Dgri\GH17535-PA 306 GH17535-PA 36..289 9..255 298 31.9 Plus
Dgri\GH12691-PA 274 GH12691-PA 23..270 8..250 291 28.4 Plus
Dgri\GH12022-PA 253 GH12022-PA 20..242 34..252 200 25.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG5623-PA 279 CG5623-PA 1..279 1..279 1536 100 Plus
CG11634-PB 298 CG11634-PB 32..280 9..253 319 32.7 Plus
CG11634-PA 298 CG11634-PA 32..280 9..253 319 32.7 Plus
CG2336-PA 322 CG2336-PA 98..309 36..250 313 32.1 Plus
CG12516-PB 300 CG12516-PB 82..296 35..250 254 30.7 Plus
CG15717-PE 252 CG15717-PE 13..248 9..250 222 25.2 Plus
CG15717-PC 252 CG15717-PC 13..248 9..250 222 25.2 Plus
CG15717-PA 252 CG15717-PA 13..248 9..250 222 25.2 Plus
CG12637-PA 292 CG12637-PA 23..238 36..247 192 25.5 Plus
CG13539-PB 260 CG13539-PB 36..255 34..247 164 22.5 Plus
CG13539-PA 260 CG13539-PA 36..255 34..247 164 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22587-PA 272 GI22587-PA 1..272 1..274 722 49.6 Plus
Dmoj\GI16366-PA 282 GI16366-PA 26..278 8..250 327 30.9 Plus
Dmoj\GI17704-PA 335 GI17704-PA 103..318 38..255 269 28.9 Plus
Dmoj\GI14293-PA 252 GI14293-PA 22..237 36..247 219 26.9 Plus
Dmoj\GI15524-PA 271 GI15524-PA 54..265 34..247 154 22.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11929-PA 282 GL11929-PA 1..280 1..279 1013 65.7 Plus
Dper\GL14951-PA 265 GL14951-PA 16..261 6..250 342 32.4 Plus
Dper\GL21758-PA 320 GL21758-PA 87..298 36..250 322 31.2 Plus
Dper\GL23868-PA 301 GL23868-PA 85..294 35..247 317 32.9 Plus
Dper\GL25661-PA 286 GL25661-PA 39..260 27..247 213 27.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:49:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19012-PA 282 GA19012-PA 1..280 1..279 1013 65.7 Plus
Dpse\GA13910-PA 265 GA13910-PA 16..261 6..250 350 32.7 Plus
Dpse\GA26390-PA 320 GA26390-PA 87..298 36..250 322 31.2 Plus
Dpse\GA11672-PA 301 GA11672-PA 85..294 35..247 315 32.9 Plus
Dpse\GA11111-PA 322 GA11111-PA 33..296 9..247 236 26.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:49:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25755-PA 279 GM25755-PA 1..279 1..279 1463 95.7 Plus
Dsec\GM10901-PA 319 GM10901-PA 95..306 36..250 315 31.6 Plus
Dsec\GM16149-PA 298 GM16149-PA 28..280 5..253 304 30.9 Plus
Dsec\GM16298-PA 291 GM16298-PA 73..287 35..250 262 31.2 Plus
Dsec\GM11602-PA 252 GM11602-PA 13..248 9..250 236 25.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20331-PA 279 GD20331-PA 1..279 1..279 1454 95 Plus
Dsim\GD19880-PA 321 GD19880-PA 97..308 36..250 310 32.1 Plus
Dsim\GD24338-PA 298 GD24338-PA 28..280 5..253 302 30.9 Plus
Dsim\GD18037-PA 300 GD18037-PA 82..296 35..250 262 31.2 Plus
Dsim\GD17100-PA 252 GD17100-PA 13..248 9..250 228 25.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10307-PA 272 GJ10307-PA 1..272 1..274 824 56.2 Plus
Dvir\GJ16736-PA 280 GJ16736-PA 24..276 9..250 344 31.9 Plus
Dvir\GJ11430-PA 333 GJ11430-PA 103..308 40..247 309 34.9 Plus
Dvir\GJ13210-PA 254 GJ13210-PA 39..245 36..245 274 29 Plus
Dvir\GJ19350-PA 246 GJ19350-PA 17..237 31..247 214 27.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11680-PA 275 GK11680-PA 1..260 1..261 862 61.7 Plus
Dwil\GK18716-PA 274 GK18716-PA 23..257 22..255 332 33.6 Plus
Dwil\GK17389-PA 299 GK17389-PA 80..295 33..250 329 33 Plus
Dwil\GK11577-PA 271 GK11577-PA 53..263 36..247 322 32.4 Plus
Dwil\GK24553-PA 296 GK24553-PA 82..292 33..250 280 30.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26361-PA 279 GE26361-PA 1..279 1..279 1397 91 Plus
Dyak\GE12931-PA 297 GE12931-PA 28..279 5..253 314 32.3 Plus
Dyak\GE10227-PA 323 GE10227-PA 101..312 36..250 305 31.6 Plus
Dyak\GE17046-PA 253 GE17046-PA 14..249 9..250 250 28.6 Plus
Dyak\GE10517-PA 273 GE10517-PA 80..269 35..250 203 30.2 Plus

AT10995.hyp Sequence

Translation from 55 to 894

> AT10995.hyp
MCEIKQNFVTHDLVHNLRCNKRSPKVRHLMKKTRAWPGARFMCVCKEGDL
NTAAYCLAELMHEPFQPFPMATVAVHHSIRDEFIERVRSRFRQLKPHVAN
HPNFIRAVNELKYGLRPVKYILADVADAPACASPILVTGGVTHLFFPSGP
SGCTTLHTFSSMREVALIFGKETPKFDAVYFFDETITGVYILAKLINCVQ
FFVNCMDACLMEIMPHYLDHTPMVVYKRGYHYETLELDQQWKIIVFPYST
SILRQCCCPTGQCRCYATHTACCEDHLQS*

AT10995.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG5623-PA 279 CG5623-PA 1..279 1..279 1536 100 Plus
CG11634-PB 298 CG11634-PB 32..280 9..253 319 32.7 Plus
CG11634-PA 298 CG11634-PA 32..280 9..253 319 32.7 Plus
CG2336-PA 322 CG2336-PA 98..309 36..250 313 32.1 Plus
CG12516-PB 300 CG12516-PB 82..296 35..250 254 30.7 Plus