BDGP Sequence Production Resources |
Search the DGRC for AT11025
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 110 |
Well: | 25 |
Vector: | pOTB7 |
Associated Gene/Transcript | fan-RA |
Protein status: | AT11025.pep: gold |
Preliminary Size: | 647 |
Sequenced Size: | 896 |
Gene | Date | Evidence |
---|---|---|
CG7919 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7919 | 2002-02-22 | Blastp of sequenced clone |
CG7919 | 2003-01-01 | Sim4 clustering to Release 3 |
fan | 2008-04-29 | Release 5.5 accounting |
fan | 2008-08-15 | Release 5.9 accounting |
fan | 2008-12-18 | 5.12 accounting |
896 bp (896 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084113
> AT11025.complete AAGGAACGTGTTCATTTGGTACCACATTTTTTTCATATATTGGTCATAAT CGGTTCCAGTTCATATCGCTTCCGATTTTTTGAAAAATAAAAAGGTACAA ATATTCCAATATGTCCGACAATACCGAGAGCAAACTTGCGCTAGACCCGT GCGATGTGATCGTCTTTGAGGGACCATTCAACCGCTCGGTGAGCAGGAAG CTAGTCATCAAGAACACCAGTAAGACCCAGCGAATGGCCTTCAAGATGAA GACCACCACTCCAAAACTTTTTTATGTACGCCCCAACATCGGTGTCTTGG GGCCCGAGCAGAAGGTCAGCGTTGACATATTCATGCAGCCAATTCTGCAG GAGCAGATAAAGAAGCGTCATAAGTTCCTTCTCCTGGCCGCCGAGGTGAC TGGTGACATAAGCGATGTGCAGGAGTTTTGGAAGATGCAGAACCCGAATG AAACTCGGGAAACCAAGATCAAATGTGAGCTAGTCCCTTCGAAGGAGGAC GATTTCCGTCAGGCGGGAGGTTCAGCTGTAATATCCACGGACAACAAGGA CGGAGAGGTCCATTTTGATGCCCAGGAAGTCAGTGAGCCAATGGCCAAGT TGCTCAAGCAAGTCAGCATGCTGGAGGACGAGCATATGGCCCTCACAGAC CAGATCGACGGCTTGCGTGACCAGGCGATTGGGCGCACTTTCTTCTACAT GGCCGCCATAGTAATCATTATACTGTCCGCTGTCGCAGGCGCCTATTATG GCAAGACTCGTTTGTAAATTCCTTATCATGGCAGTTTTTAGAACATAAGG CAGTAAATTGCACCGAAATTGTACGAAAATTATTTGTCAATAAAGGACAT TTTGGTTGCATATTCTATTTTGAGATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fan-RA | 880 | fan-RA | 3..876 | 3..877 | 4335 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8101219..8102091 | 3..876 | 4320 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8109171..8110044 | 3..877 | 4325 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8102271..8103144 | 3..877 | 4335 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8101217..8102091 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..657 | 111..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..657 | 111..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..657 | 111..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..657 | 111..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..657 | 111..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..875 | 2..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 38..912 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 38..912 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 1..875 | 2..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fan-RA | 38..912 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8109169..8110043 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8109169..8110043 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8109169..8110043 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8102269..8103143 | 1..876 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8102269..8103143 | 1..876 | 99 | Plus |
Translation from 110 to 766
> AT11025.pep MSDNTESKLALDPCDVIVFEGPFNRSVSRKLVIKNTSKTQRMAFKMKTTT PKLFYVRPNIGVLGPEQKVSVDIFMQPILQEQIKKRHKFLLLAAEVTGDI SDVQEFWKMQNPNETRETKIKCELVPSKEDDFRQAGGSAVISTDNKDGEV HFDAQEVSEPMAKLLKQVSMLEDEHMALTDQIDGLRDQAIGRTFFYMAAI VIIILSAVAGAYYGKTRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23956-PA | 227 | GF23956-PA | 6..227 | 9..218 | 621 | 55.4 | Plus |
Dana\GF22260-PA | 276 | GF22260-PA | 1..124 | 1..122 | 216 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14468-PA | 232 | GG14468-PA | 1..232 | 1..218 | 868 | 71.2 | Plus |
Dere\GG18683-PA | 273 | GG18683-PA | 10..145 | 9..141 | 214 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14992-PA | 241 | GH14992-PA | 6..241 | 9..218 | 278 | 30 | Plus |
Dgri\GH24467-PA | 269 | GH24467-PA | 8..126 | 6..122 | 202 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fan-PA | 218 | CG7919-PA | 1..218 | 1..218 | 1106 | 100 | Plus |
Vap33-PE | 269 | CG5014-PE | 10..145 | 9..140 | 210 | 35 | Plus |
Vap33-PC | 269 | CG5014-PC | 10..145 | 9..140 | 210 | 35 | Plus |
Vap33-PB | 269 | CG5014-PB | 10..145 | 9..140 | 210 | 35 | Plus |
Vap33-PA | 235 | CG5014-PA | 10..234 | 9..213 | 208 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13153-PA | 220 | GI13153-PA | 2..217 | 9..215 | 396 | 35.6 | Plus |
Dmoj\GI16484-PA | 269 | GI16484-PA | 8..136 | 6..131 | 210 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26519-PA | 249 | GL26519-PA | 1..201 | 1..189 | 350 | 40 | Plus |
Dper\GL25412-PA | 240 | GL25412-PA | 1..192 | 1..189 | 305 | 34.2 | Plus |
Dper\GL14766-PA | 263 | GL14766-PA | 5..141 | 4..137 | 232 | 37.7 | Plus |
Dper\GL24786-PA | 201 | GL24786-PA | 1..149 | 1..147 | 196 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28892-PA | 249 | GA28892-PA | 1..201 | 1..189 | 348 | 40 | Plus |
Dpse\GA28611-PA | 240 | GA28611-PA | 1..192 | 1..189 | 305 | 34.9 | Plus |
Dpse\GA18596-PA | 263 | GA18596-PA | 5..141 | 4..137 | 232 | 37.7 | Plus |
Dpse\GA28912-PA | 220 | GA28912-PA | 1..214 | 1..212 | 219 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25016-PA | 218 | GM25016-PA | 1..218 | 1..218 | 1065 | 88.5 | Plus |
Dsec\GM12317-PA | 251 | GM12317-PA | 10..117 | 9..131 | 178 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14051-PA | 218 | GD14051-PA | 1..218 | 1..218 | 1060 | 87.6 | Plus |
Dsim\GD16666-PA | 235 | GD16666-PA | 10..133 | 9..129 | 212 | 37.6 | Plus |
Dsim\GD13915-PA | 240 | GD13915-PA | 28..141 | 1..115 | 141 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11927-PA | 228 | GJ11927-PA | 7..226 | 5..216 | 449 | 38.5 | Plus |
Dvir\GJ16028-PA | 267 | GJ16028-PA | 8..134 | 6..128 | 211 | 35.9 | Plus |
Translation from 110 to 766
> AT11025.hyp MSDNTESKLALDPCDVIVFEGPFNRSVSRKLVIKNTSKTQRMAFKMKTTT PKLFYVRPNIGVLGPEQKVSVDIFMQPILQEQIKKRHKFLLLAAEVTGDI SDVQEFWKMQNPNETRETKIKCELVPSKEDDFRQAGGSAVISTDNKDGEV HFDAQEVSEPMAKLLKQVSMLEDEHMALTDQIDGLRDQAIGRTFFYMAAI VIIILSAVAGAYYGKTRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fan-PA | 218 | CG7919-PA | 1..218 | 1..218 | 1106 | 100 | Plus |
Vap-33A-PE | 269 | CG5014-PE | 10..145 | 9..140 | 210 | 35 | Plus |
Vap-33A-PC | 269 | CG5014-PC | 10..145 | 9..140 | 210 | 35 | Plus |
Vap-33A-PB | 269 | CG5014-PB | 10..145 | 9..140 | 210 | 35 | Plus |
Vap-33A-PA | 235 | CG5014-PA | 10..234 | 9..213 | 208 | 27.8 | Plus |