BDGP Sequence Production Resources |
Search the DGRC for AT11049
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 110 |
Well: | 49 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG13405-RA |
Protein status: | AT11049.pep: gold |
Preliminary Size: | 573 |
Sequenced Size: | 798 |
Gene | Date | Evidence |
---|---|---|
CG13405 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13405 | 2002-04-26 | Blastp of sequenced clone |
CG13405 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13405 | 2008-04-29 | Release 5.5 accounting |
CG13405 | 2008-08-15 | Release 5.9 accounting |
CG13405 | 2008-12-18 | 5.12 accounting |
798 bp (798 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113231
> AT11049.complete ATGTAAACTAATACCCCTGCATCGCTTAATACAATTTATCCCTAACATCC GAAGCAATGTCTGATGTGGAGCAAGAAGCCTCTGGAGACGTTGATAATGA GCAAAATGAAGGACAAGAAGCTGCTGAAGATTTTGAGGGAGAGGGCGAAG GAGACGAACAGGACGTTGAAGAGGAAGATAAGTTCGAGGTGGAGGAGAAG GATCCCTTTGAGCTCCTCAATGAGAGCGATGAAGACGATGAAGAGCAACA GGCAATGTACAAGGAGTATCAGGAGGTGGTCAACGCTATTGATGCGCAGA ACAGGATTATAAAAGAGCTCAAGGCAAAGTCCAATCGACTGATGTTCAAG AAGTGCAAGACTTATAGAGACAAGCAGGAATACAAACAACTTAGGGTCTG TCAGGAGCATGAGGAGATCCATTTAAAGGTTCTCGTGAATAGAGCCATGC ACCTCCAAAACTTCGGTTCACCTAGGCGCTACAGAGATATAGAAATGGAA GTCACAGAGGACGAGAAGAGCTACTTTTATACTGAACTACAATCGACCTT ATCAGGCTTTTGTCCCACGGATTCGGCTGACGAATATGAGTCGGATTCTG AATCGGATAATGGACTATGTTGTACCTAGTTTCCTAGCGGAGTTTCCGAA AATTGACGGGGAAAAGTTATGAAAATACTTGAATAATTGTGGAATATCTT CATATTTTACATATATACATATCTACACATATCAACGACACTGCACTCAA TAAAATGGGAAAGGATGGAGGGAATGTGAATAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 74445..75225 | 781..1 | 3905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 74480..75266 | 787..1 | 3935 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 74480..75266 | 787..1 | 3935 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 74445..75225 | 1..781 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..573 | 57..629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..573 | 57..629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..573 | 57..629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..573 | 57..629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..573 | 57..629 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..781 | 1..781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..781 | 1..781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 5..785 | 1..781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 1..781 | 1..781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13405-RA | 5..785 | 1..781 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 74486..75266 | 1..781 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 74486..75266 | 1..781 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 74486..75266 | 1..781 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 74486..75266 | 1..781 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 74486..75266 | 1..781 | 100 | Minus |
Translation from 56 to 628
> AT11049.hyp MSDVEQEASGDVDNEQNEGQEAAEDFEGEGEGDEQDVEEEDKFEVEEKDP FELLNESDEDDEEQQAMYKEYQEVVNAIDAQNRIIKELKAKSNRLMFKKC KTYRDKQEYKQLRVCQEHEEIHLKVLVNRAMHLQNFGSPRRYRDIEMEVT EDEKSYFYTELQSTLSGFCPTDSADEYESDSESDNGLCCT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13405-PB | 190 | CG13405-PB | 1..190 | 1..190 | 997 | 100 | Plus |
CG13405-PA | 190 | CG13405-PA | 1..190 | 1..190 | 997 | 100 | Plus |
CG3213-PA | 676 | CG3213-PA | 9..138 | 25..153 | 253 | 42.7 | Plus |
Translation from 56 to 628
> AT11049.pep MSDVEQEASGDVDNEQNEGQEAAEDFEGEGEGDEQDVEEEDKFEVEEKDP FELLNESDEDDEEQQAMYKEYQEVVNAIDAQNRIIKELKAKSNRLMFKKC KTYRDKQEYKQLRVCQEHEEIHLKVLVNRAMHLQNFGSPRRYRDIEMEVT EDEKSYFYTELQSTLSGFCPTDSADEYESDSESDNGLCCT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24900-PA | 282 | GF24900-PA | 53..182 | 51..189 | 317 | 50.4 | Plus |
Dana\GF14666-PA | 666 | GF14666-PA | 12..157 | 28..175 | 248 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14689-PA | 191 | GG14689-PA | 1..191 | 1..190 | 711 | 80.6 | Plus |
Dere\GG24430-PA | 679 | GG24430-PA | 35..172 | 49..189 | 237 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15998-PA | 203 | GH15998-PA | 27..202 | 16..188 | 287 | 41.3 | Plus |
Dgri\GH13194-PA | 674 | GH13194-PA | 2..165 | 28..179 | 239 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13405-PB | 190 | CG13405-PB | 1..190 | 1..190 | 997 | 100 | Plus |
CG13405-PA | 190 | CG13405-PA | 1..190 | 1..190 | 997 | 100 | Plus |
CG3213-PA | 676 | CG3213-PA | 9..138 | 25..153 | 253 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16651-PA | 195 | GI16651-PA | 44..168 | 47..171 | 272 | 43.2 | Plus |
Dmoj\GI17773-PA | 678 | GI17773-PA | 5..137 | 29..153 | 242 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16091-PA | 202 | GL16091-PA | 51..200 | 44..188 | 299 | 42.1 | Plus |
Dper\GL19472-PA | 620 | GL19472-PA | 8..172 | 25..189 | 240 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28489-PA | 218 | GA28489-PA | 73..216 | 50..188 | 283 | 41.1 | Plus |
Dpse\GA16698-PA | 661 | GA16698-PA | 8..171 | 25..188 | 243 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14303-PA | 188 | GM14303-PA | 1..188 | 1..190 | 837 | 92.6 | Plus |
Dsec\GM18141-PA | 337 | GM18141-PA | 35..170 | 49..183 | 236 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13541-PA | 190 | GD13541-PA | 1..190 | 1..190 | 805 | 93.7 | Plus |
Dsim\GD22749-PA | 676 | GD22749-PA | 35..154 | 49..174 | 234 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17597-PA | 677 | GJ17597-PA | 3..168 | 27..179 | 267 | 41.9 | Plus |
Dvir\GJ12904-PA | 207 | GJ12904-PA | 47..201 | 47..188 | 248 | 39.4 | Plus |