AT11052.complete Sequence
1889 bp (1889 high quality bases) assembled on 2002-09-24
GenBank Submission: BT001295
> AT11052.complete
GTTTTACTGAAAAAATTGTGTGTGCTGGGTGCCTAGAATCCTATTTGAAC
GTTGTTCGATGATTTCTTGTCCGGAATTGCTATTCAAATCCTGTGATTCA
GGACGATGGACTACAGAGCGATGAATGAATCCTGCCAATGTCCACGGTGT
CGGTATGAACTTCGTTTGCCCAATCAGCCGATGCCCTGCCAAGAGAAATG
TTTCCCGGAGAAATATCTGATGTGTGGTTCGGATCTACGTCCTCGCTGGC
AGAACAGACCAGATCCTCGGGAAGTTTTTCAGAATTTTTCCCAAAGAAAT
CCTCAAATACTTTCTCAGGAATCTGTTCAGAGTTGGAGTTTCCAGCATCC
TCAAAACTGTTTCTGTGGACATCAACCTCCAATGCGAGCTCTGCCCGACC
ATTCTCAGCAATTTTCCCAAGAATATTCTCAGCAGTGTTCGCAACAATCT
CCTTGTGTTTCTCGTTGTGGCCAACAAAATCGACAGAACTGCTTTCAGCC
GCCTTGTCCAAACTGGACCAGACCATGTTGTTGCATAACCCACGAAGTCG
GCGTTCAAACGGACGAGATGGACGAATGCGAGCCCGAGTATATAGCGATC
ACCGACATCACCACAAAGGAGATGAAGGTGAAGCATCGCACCGGAAAGAC
GGAGACGATCATCGAAAAGGTTCAGTCGGTCACCCAGTTTCCCGTGACGG
AAACTCAGCGCCTTGGGGAGAATGATTACGAACCAAAGTACGTCCAAGAC
AAGGATGCAATTCCTTATCGAGCCATGAGGCATTCCGAGCTGGAGCCCTT
GCTGGTGTCGATGAGGGCGGAGGTGCCAATAACTGAATCTAAAGATGCAA
AGGAGGAGATCGTCTACCAGGAATATGAGAAGACGGAGCGCGATTTTGAT
GACCCTAAAGCCAAGGTAGAGAAGACCATCATCAAGGTCAAAATTCCGGT
GGACTCACCCGAAGCCGAAGAATCGAACTCCAGCCCGCCCAGTGGTATAC
CACCTCCTTCCCAACTGCCCAGCGATATACCACCTCCTTCCCAACTGCCC
AGCGATATACCACCTCCTTCCCAACTGCCCAGCGATATACCACCGCCATC
CCAACTGCCCAGTGGTACACCACCTCCTTCCCGACTGCCTACTAGTATAA
CCCCTCCTTCCCAAGTGCCAAACAAGGATTCATCCCAGCCATCACTACCA
ACAGACATTTCCTCAATTTCGGAGGAAGATCCATCACTTGTCAAGAATGA
AGATACAAGTTCGACAGATCTCGATGTATATGACCAGAAGGAATCAGTAG
AGAAGGAGATGAATGAAGGGCATTCCGAATCTGACATCGTGAGTACCGTG
CAGGTAAAGGTCACCAATAGAAAGGAGGCATCCGTGAGGGGTCATCATGA
CCGGGAGCCCAAGAAAACAGCGATCTTCGAGAGCAGCGTGTCCCAGGTGC
TAATAAAGAAGCCTGAGAAGAAACCGGAAGAAAAAAAACCGAAGCGACCG
CCACCCAAAGTGGAAGTCAAGCTAGGCTATCCACCAAACGACTTGGTCTG
CAGATACGCCAATCCTCCGCGATGCAGACCTAAATGCGACAGCTGCAGAT
GTCCTTGTCCGCCGTCCATCTCCTGCAACCAATGTCCTCCCTGTGCCCCC
AGCACATGCCAATGCGATCCCATCTACGGTTTCGGCGGCAAGTGTGTCGG
ATACTATTGTATTTAAAAATGTTCCAAAAATACTACAAGTGACCAATTAA
CTAAAACAGTTTCAAATCGCATTACCAACTATAAAATATTCCAAAAATCT
AGATACATAAATCACTACTTTCGAAATATATGGATGTTTTAAGACGCCAT
TATGTCATATCTTGAAGAAAAAAAAAAAAAAAAAAAAAA
AT11052.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-RB | 1961 | CG30416-RB | 118..1961 | 1..1844 | 9130 | 99.6 | Plus |
CG30416.c | 1953 | CG30416.c | 118..1953 | 1..1844 | 8985 | 99.2 | Plus |
CG30416.b | 1970 | CG30416.b | 118..1377 | 1..1260 | 6285 | 99.9 | Plus |
CG30416.b | 1970 | CG30416.b | 1384..1970 | 1258..1844 | 2860 | 99.1 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:56:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19208487..19209745 | 1259..1 | 6295 | 100 | Minus |
chr2R | 21145070 | chr2R | 19207826..19208412 | 1844..1258 | 2875 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 19208577..19208729 | 1139..987 | 495 | 88.2 | Minus |
chr2R | 21145070 | chr2R | 19208607..19208759 | 1169..1017 | 495 | 88.2 | Minus |
chr2R | 21145070 | chr2R | 19208607..19208699 | 1079..987 | 345 | 91.4 | Minus |
chr2R | 21145070 | chr2R | 19208667..19208759 | 1139..1047 | 345 | 91.4 | Minus |
chr2R | 21145070 | chr2R | 19208577..19208669 | 1079..987 | 225 | 82.8 | Minus |
chr2R | 21145070 | chr2R | 19208667..19208759 | 1169..1077 | 225 | 82.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:45:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:56:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23322141..23323399 | 1259..1 | 6280 | 99.9 | Minus |
2R | 25286936 | 2R | 23321480..23322066 | 1844..1258 | 2860 | 99.1 | Minus |
2R | 25286936 | 2R | 23322231..23322383 | 1139..987 | 495 | 88.2 | Minus |
2R | 25286936 | 2R | 23322261..23322413 | 1169..1017 | 495 | 88.2 | Minus |
2R | 25286936 | 2R | 23322261..23322353 | 1079..987 | 345 | 91.4 | Minus |
2R | 25286936 | 2R | 23322321..23322413 | 1139..1047 | 345 | 91.4 | Minus |
2R | 25286936 | 2R | 23322321..23322413 | 1169..1077 | 225 | 82.8 | Minus |
2R | 25286936 | 2R | 23322231..23322323 | 1079..987 | 225 | 82.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:14:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23323340..23324598 | 1259..1 | 6280 | 99.9 | Minus |
2R | 25260384 | 2R | 23322679..23323265 | 1844..1258 | 2860 | 99.1 | Minus |
Blast to na_te.dros performed on 2019-03-16 05:56:21 has no hits.
AT11052.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:57:18 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19207823..19208410 | 1260..1851 | 98 | <- | Minus |
chr2R | 19208487..19209745 | 1..1259 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 14:59:35 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RA | 1..1620 | 106..1716 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:13:50 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1611 | 106..1716 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:22:52 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1611 | 106..1716 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:04:53 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RA | 1..1620 | 106..1716 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:06 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1611 | 106..1716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:36:43 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RA | 12..1828 | 1..1808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:13:50 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1844 | 1..1844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:52 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1843 | 1..1843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:04:53 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RA | 12..1828 | 1..1808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:06 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30416-RB | 1..1843 | 1..1843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:18 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23321477..23322064 | 1260..1851 | 98 | <- | Minus |
2R | 23322141..23323399 | 1..1259 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:18 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23321477..23322064 | 1260..1851 | 98 | <- | Minus |
2R | 23322141..23323399 | 1..1259 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:18 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23321477..23322064 | 1260..1851 | 98 | <- | Minus |
2R | 23322141..23323399 | 1..1259 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:52 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19209000..19209587 | 1260..1851 | 98 | <- | Minus |
arm_2R | 19209664..19210922 | 1..1259 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:36:39 Download gff for
AT11052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23322694..23323281 | 1260..1851 | 98 | <- | Minus |
2R | 23323358..23324616 | 1..1259 | 99 | | Minus |
AT11052.pep Sequence
Translation from 105 to 1715
> AT11052.pep
MDYRAMNESCQCPRCRYELRLPNQPMPCQEKCFPEKYLMCGSDLRPRWQN
RPDPREVFQNFSQRNPQILSQESVQSWSFQHPQNCFCGHQPPMRALPDHS
QQFSQEYSQQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGV
QTDEMDECEPEYIAITDITTKEMKVKHRTGKTETIIEKVQSVTQFPVTET
QRLGENDYEPKYVQDKDAIPYRAMRHSELEPLLVSMRAEVPITESKDAKE
EIVYQEYEKTERDFDDPKAKVEKTIIKVKIPVDSPEAEESNSSPPSGIPP
PSQLPSDIPPPSQLPSDIPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITP
PSQVPNKDSSQPSLPTDISSISEEDPSLVKNEDTSSTDLDVYDQKESVEK
EMNEGHSESDIVSTVQVKVTNRKEASVRGHHDREPKKTAIFESSVSQVLI
KKPEKKPEEKKPKRPPPKVEVKLGYPPNDLVCRYANPPRCRPKCDSCRCP
CPPSISCNQCPPCAPSTCQCDPIYGFGGKCVGYYCI*
AT11052.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13299-PA | 537 | GF13299-PA | 418..536 | 410..533 | 160 | 39.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:40:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20047-PA | 368 | GG20047-PA | 4..368 | 157..536 | 1095 | 65.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-PB | 536 | CG30416-PB | 1..536 | 1..536 | 2954 | 100 | Plus |
CG30416-PC | 539 | CG30416-PC | 1..539 | 1..536 | 2940 | 99.4 | Plus |
CG11835-PD | 795 | CG11835-PD | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PC | 795 | CG11835-PC | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PB | 795 | CG11835-PB | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PA | 795 | CG11835-PA | 308..630 | 154..517 | 175 | 22.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:40:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15562-PA | 548 | GM15562-PA | 1..548 | 1..536 | 2231 | 84.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:40:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25063-PA | 414 | GD25063-PA | 4..414 | 130..536 | 1566 | 82.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:40:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11583-PA | 564 | GE11583-PA | 1..564 | 1..536 | 1476 | 62.4 | Plus |
AT11052.hyp Sequence
Translation from 105 to 1715
> AT11052.hyp
MDYRAMNESCQCPRCRYELRLPNQPMPCQEKCFPEKYLMCGSDLRPRWQN
RPDPREVFQNFSQRNPQILSQESVQSWSFQHPQNCFCGHQPPMRALPDHS
QQFSQEYSQQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGV
QTDEMDECEPEYIAITDITTKEMKVKHRTGKTETIIEKVQSVTQFPVTET
QRLGENDYEPKYVQDKDAIPYRAMRHSELEPLLVSMRAEVPITESKDAKE
EIVYQEYEKTERDFDDPKAKVEKTIIKVKIPVDSPEAEESNSSPPSGIPP
PSQLPSDIPPPSQLPSDIPPPSQLPSDIPPPSQLPSGTPPPSRLPTSITP
PSQVPNKDSSQPSLPTDISSISEEDPSLVKNEDTSSTDLDVYDQKESVEK
EMNEGHSESDIVSTVQVKVTNRKEASVRGHHDREPKKTAIFESSVSQVLI
KKPEKKPEEKKPKRPPPKVEVKLGYPPNDLVCRYANPPRCRPKCDSCRCP
CPPSISCNQCPPCAPSTCQCDPIYGFGGKCVGYYCI*
AT11052.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:03:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30416-PB | 536 | CG30416-PB | 1..536 | 1..536 | 2954 | 100 | Plus |
CG30416-PC | 539 | CG30416-PC | 1..539 | 1..536 | 2940 | 99.4 | Plus |
CG11835-PD | 795 | CG11835-PD | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PC | 795 | CG11835-PC | 308..630 | 154..517 | 175 | 22.8 | Plus |
CG11835-PB | 795 | CG11835-PB | 308..630 | 154..517 | 175 | 22.8 | Plus |