BDGP Sequence Production Resources |
Search the DGRC for AT11334
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 113 |
Well: | 34 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5435-RA |
Protein status: | AT11334.pep: gold |
Preliminary Size: | 678 |
Sequenced Size: | 952 |
Gene | Date | Evidence |
---|---|---|
CG5435 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5435 | 2002-05-17 | Blastp of sequenced clone |
CG5435 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5435 | 2008-04-29 | Release 5.5 accounting |
CG5435 | 2008-08-15 | Release 5.9 accounting |
CG5435 | 2008-12-18 | 5.12 accounting |
952 bp (952 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118683
> AT11334.complete CCTCGTGCCGGGAAACCGAAGGCAAAATCACATATACCCAAGTCCTTCTG AATACGATTCAGAAACCCTTTTACACTTTCATCTAAATTATATTGGTTGC TCCTGCAAAGATGATTCAGTACGATACTGTGCAGATCAAGAATGTATCAT GGCAGCCGGAACTGCATACGGAGGGCACCTATGTGTGCTCTTTTCCAGAG CCCCCGCTGCCGGAGGCCCATCTGAAACCGGGCACCTGGCATGGCCATCT GGAGCCGTATCAGCGGCTCTTCTATCATCAAACGATGAACTCGGTGCGCT CGAGCAAGCGGTACCGTGCCAATCCGAACATCCCGAAGGATACGCTGGAC TTTTCGCTGCAGTCGCGCTACGATCACACCCGCGAAGCATTTCCGGACAA GGTGGACTACGTGATGCAGAGGGAGACGTGCCGCGCCATAAGTAGCTGGT CAGCTCCTGGGGCGGCCAAGGAAATTGGTTCCCAACTCAAATCATTTCGG GTGTTGCGCAACACGCGCTTCATTCGGCGCAAGCAGGAGGACGTATTGGG TCATCCACTTCGCATAGGCGGTTGTAAGGAAAAGATTCATCCGCACAGCG TGAAGCTCATTTGCAGCGGTGTCCACAACCAGCTGGTGAACAATGGATTC TCGCGCCAGACCTCCGACGGCAACTTCTTCCGCTATTAGTTCCACAAATC TGTGTTTGCTTTCCCAGAAAGAATACCATTTTGCGTTTTGGGTTTTACAA ACATTATTGGAAATAAATTTGGGACACAGAAGCAGTCGTCACGCAGTCGC CTCCAGCTTGGGCTGCTTGGGCAGGTGCTCCACATCTCCATCATACTCAT CCACTGCTTGTGGAGTGTCCTGTTGGTCATCCTCCGCCTGTTGCTCCGAC GCTTTGTGACGCTGTTTCTTGTTCTGGTTACGATAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12428900..12429317 | 568..151 | 2090 | 100 | Minus |
chr2L | 23010047 | chr2L | 12428450..12428818 | 934..566 | 1845 | 100 | Minus |
chr2L | 23010047 | chr2L | 12429369..12429515 | 152..6 | 735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12430277..12430694 | 568..151 | 2090 | 100 | Minus |
2L | 23513712 | 2L | 12429826..12430195 | 935..566 | 1820 | 99.5 | Minus |
2L | 23513712 | 2L | 12430746..12430892 | 152..6 | 720 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12430277..12430694 | 568..151 | 2090 | 100 | Minus |
2L | 23513712 | 2L | 12429826..12430195 | 935..566 | 1820 | 99.4 | Minus |
2L | 23513712 | 2L | 12430746..12430892 | 152..6 | 720 | 99.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12428450..12428816 | 568..934 | 100 | <- | Minus |
chr2L | 12428901..12429316 | 152..567 | 100 | <- | Minus |
chr2L | 12429370..12429516 | 1..151 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..579 | 111..689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..579 | 111..689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..579 | 111..689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..579 | 111..689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..579 | 111..689 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..930 | 6..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..929 | 6..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..903 | 32..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RA | 1..930 | 6..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5435-RB | 1..929 | 6..934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12429827..12430193 | 568..934 | 99 | <- | Minus |
2L | 12430278..12430693 | 152..567 | 100 | <- | Minus |
2L | 12430747..12430893 | 1..151 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12429827..12430193 | 568..934 | 99 | <- | Minus |
2L | 12430278..12430693 | 152..567 | 100 | <- | Minus |
2L | 12430747..12430893 | 1..151 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12429827..12430193 | 568..934 | 99 | <- | Minus |
2L | 12430278..12430693 | 152..567 | 100 | <- | Minus |
2L | 12430747..12430893 | 1..151 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12430747..12430893 | 1..151 | 96 | Minus | |
arm_2L | 12429827..12430193 | 568..934 | 99 | <- | Minus |
arm_2L | 12430278..12430693 | 152..567 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12429827..12430193 | 568..934 | 99 | <- | Minus |
2L | 12430278..12430693 | 152..567 | 100 | <- | Minus |
2L | 12430747..12430893 | 1..151 | 96 | Minus |
Translation from 110 to 688
> AT11334.pep MIQYDTVQIKNVSWQPELHTEGTYVCSFPEPPLPEAHLKPGTWHGHLEPY QRLFYHQTMNSVRSSKRYRANPNIPKDTLDFSLQSRYDHTREAFPDKVDY VMQRETCRAISSWSAPGAAKEIGSQLKSFRVLRNTRFIRRKQEDVLGHPL RIGGCKEKIHPHSVKLICSGVHNQLVNNGFSRQTSDGNFFRY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15673-PA | 193 | GF15673-PA | 1..193 | 1..192 | 907 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10263-PA | 192 | GG10263-PA | 1..192 | 1..192 | 1033 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11679-PA | 190 | GH11679-PA | 2..190 | 4..192 | 622 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5435-PB | 192 | CG5435-PB | 1..192 | 1..192 | 1047 | 100 | Plus |
CG5435-PA | 192 | CG5435-PA | 1..192 | 1..192 | 1047 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17123-PA | 190 | GI17123-PA | 7..190 | 9..192 | 635 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18773-PA | 192 | GL18773-PA | 1..192 | 1..192 | 812 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18880-PA | 192 | GA18880-PA | 1..192 | 1..192 | 817 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26229-PA | 192 | GM26229-PA | 1..192 | 1..192 | 1040 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22121-PA | 192 | GD22121-PA | 1..192 | 1..192 | 1040 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14627-PA | 192 | GK14627-PA | 1..192 | 1..192 | 803 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12294-PA | 192 | GE12294-PA | 1..192 | 1..192 | 1042 | 99 | Plus |
Translation from 110 to 688
> AT11334.hyp MIQYDTVQIKNVSWQPELHTEGTYVCSFPEPPLPEAHLKPGTWHGHLEPY QRLFYHQTMNSVRSSKRYRANPNIPKDTLDFSLQSRYDHTREAFPDKVDY VMQRETCRAISSWSAPGAAKEIGSQLKSFRVLRNTRFIRRKQEDVLGHPL RIGGCKEKIHPHSVKLICSGVHNQLVNNGFSRQTSDGNFFRY*