Clone AT11374 Report

Search the DGRC for AT11374

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:113
Well:74
Vector:pOTB7
Associated Gene/TranscriptCG40053-RA
Protein status:AT11374.pep: wuzgold
Sequenced Size:1378

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12571 2002-01-01 Sim4 clustering to Release 2
CG40053 2002-02-27 Blastp of sequenced clone
CG40053 2003-01-01 Sim4 clustering to Release 3
CG40053 2008-04-29 Release 5.5 accounting
CG40053 2008-08-15 Release 5.9 accounting
CG40053 2008-12-18 5.12 accounting

Clone Sequence Records

AT11374.complete Sequence

1378 bp (1378 high quality bases) assembled on 2002-02-27

GenBank Submission: AY084114

> AT11374.complete
ATGGATTTTTTGATTTCTTTACACTTTCATTCTTGCGTTGTCCCTAGTTC
TGTTTCTTACTCCACAAACGCCGTAAACCCTCAAATATTAATCTAATCGT
CAGCTAAAAAGGATTCGGAGCAATCGGAATGTGGTTTCAGTGCAGTAATT
CGTCCTGTCCGGATTAGTTGGCCCATTTGGCCCTTCAGAAACTGCCGGGT
TGCGTTTCTGAAGGGCCAGATTAAAGGCCCCTAAAAGAGGCTTAAAACTC
CCCATAAATCCGGGAGCAGGATAGCTGCAGGGCAACAGCGATGAAGGCAG
TAATGCGAGATGGGTTAAGGTTAGCAGTAGTGGACCTTGAACCCCGACAA
AGCGGAGAGACCGTGAACTATCGGTACCGCGCTGGACACCGTGAACTAGA
CGGAGCAACTGCCCGCAGCAGACGGCGATTACTGTTTCTGAAACACCGTA
CCCCCAAAATATAAACTTGGTGGGACGAACAAACAAACTCTGAGCTAGCC
GAAAACAGTTCGTTACATTTGGCGCCCAAATTAATAGTGCAGATCAAGGA
CCCAGAATGGAGGGGACCAACGTCATCCTGCTCAAGGAGCAGGAGGAGCT
TCAGGTTGATGGGACGGGAAACGCGGTGTTTTGAGGCGAGTAAACGAAAA
ACCGACGACGAGTGGGTAGGGACATCGTGAAAATGGCAGGGATCAAAGCA
GTGGTCGCCAACATCAGGAGCAAGGAAGACACCATAAAGCTGTTATTGAG
GAAAACGAAACACGACAGTCGGCATCAAACCAGTGGCGAAAATTGTGATG
AGGGTGTGCGATATCAGCGGTCGATCGATAGGAAATGGATTTTCAACACG
CGGTCACAATGTGGGGAGCAATCGGCAAAACATGGGAACACCTATATGAA
CAGGAAGTAGCAATGCCGATTTAAGCGGGCAGTGTAGCCAGGGATTTCGA
AGATAAGCGCCACCTAACAACGATTAACGTCGGTATACTATTGATTTCGC
AACACACTAAGCGGCAGGCTTGCATTAACGTTAACGCTATAAAACTTTCC
GTAGTCTATCACTAGAGAGCTATCACATAGTGAATAGAAGGTAGCAGACT
TTTCTTTAGGATTCTGATTCTCTTTTGTGACGCCGATCAGATCCCGTTTC
GTTGAACTAAGGCGATAAGGTGATGAATGCCAATTCTTTTTCGAAACCAG
TTGATACTGCTGATCTTAGGTATTTTTAAACAAAGTCGATTTTTTTTTAT
CATGCTTGTTCCAATTGTCCAAAATGCTTTTCGTATCTGGTTCGAAAAAT
GATCACAGCTGGTTGATTTGCAAAAAAAGAACTGTACAATAGAAAAATTT
TTAAAATTTCAAAAAAAAAAAAAAAAAA

AT11374.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG40053-RA 1471 CG40053-RA 111..1471 1..1361 6805 100 Plus
CG14438-RB 10603 CG14438-RB 10532..10593 1287..1226 220 90.3 Minus
CG14438-RA 10777 CG14438-RA 10706..10767 1287..1226 220 90.3 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 23998839..24000068 1360..131 6135 99.9 Minus
chr3L 24539361 chr3L 24000140..24000270 131..1 655 100 Minus
chr3RHet 2517486 chr3RHet 1868605..1868697 652..743 235 86 Plus
chr3RHet 2517486 chr3RHet 1873719..1873811 652..743 235 86 Plus
chrX 22417052 chrX 6662780..6662841 1287..1226 220 90.3 Minus
chrU 10048995 chrU 396015..396069 387..333 215 92.7 Minus
chr2R 21145070 chr2R 1261607..1261661 385..331 215 92.7 Minus
chr3L 24539361 chr3L 24288787..24288843 331..387 210 91.2 Plus
chr3LHet 2555433 chr3LHet 1528966..1529056 742..653 210 84.6 Minus
chr2RHet 3288813 chr2RHet 759086..759136 337..387 210 94.1 Plus
chr2L 23010047 chr2L 22961277..22961333 331..387 210 91.2 Plus
chr2R 21145070 chr2R 961352..961406 331..385 200 90.9 Plus
chr2R 21145070 chr2R 637473..637529 387..331 195 89.5 Minus
chr3RHet 2517486 chr3RHet 1869237..1869292 332..387 190 89.3 Plus
chr3RHet 2517486 chr3RHet 1874351..1874406 332..387 190 89.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:45:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 24009927..24011161 1365..131 6160 99.9 Minus
3L 28110227 3L 24011233..24011363 131..1 655 100 Minus
3R 32079331 3R 3648421..3648513 743..652 235 86 Minus
3R 32079331 3R 3653629..3653721 743..652 235 86 Minus
3R 32079331 3R 3666195..3666287 743..652 235 86 Minus
3R 32079331 3R 3659850..3659942 743..652 220 84.9 Minus
X 23542271 X 6770650..6770711 1287..1226 220 90.3 Minus
3R 32079331 3R 1858458..1858512 387..333 215 92.7 Minus
2R 25286936 2R 5374196..5374250 385..331 215 92.7 Minus
3L 28110227 3L 24299887..24299943 331..387 210 91.2 Plus
3L 28110227 3L 26161979..26162069 742..653 210 84.6 Minus
2R 25286936 2R 2015940..2015990 337..387 210 94.1 Plus
2L 23513712 2L 23070042..23070098 331..387 210 91.2 Plus
2R 25286936 2R 5073807..5073861 331..385 200 90.9 Plus
2R 25286936 2R 4749889..4749945 387..331 195 89.5 Minus
3R 32079331 3R 3647826..3647881 387..332 190 89.3 Minus
3R 32079331 3R 3653034..3653089 387..332 190 89.3 Minus
3R 32079331 3R 3659255..3659310 387..332 190 89.3 Minus
3R 32079331 3R 3665600..3665655 387..332 190 89.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 24003027..24004261 1365..131 6160 99.9 Minus
3L 28103327 3L 24004333..24004463 131..1 655 100 Minus
3R 31820162 3R 3315067..3315159 743..652 245 86 Minus
3R 31820162 3R 3309859..3309951 743..652 245 86 Minus
3R 31820162 3R 3327633..3327725 743..652 245 86 Minus
3L 28103327 3L 26155079..26155169 742..653 220 84.6 Minus
X 23527363 X 6778748..6778809 1287..1226 220 90.3 Minus
3R 31820162 3R 1656036..1656090 387..333 215 92.7 Minus
2R 25260384 2R 5375395..5375449 385..331 215 92.7 Minus
3L 28103327 3L 24292987..24293043 331..387 210 91.2 Plus
2R 25260384 2R 2015940..2015990 337..387 210 94.1 Plus
2L 23513712 2L 23070042..23070098 331..387 210 91.2 Plus
2R 25260384 2R 5075006..5075060 331..385 200 90.9 Plus
2R 25260384 2R 4751088..4751144 387..331 195 89.4 Minus
3R 31820162 3R 3320693..3320748 387..332 190 89.2 Minus
3R 31820162 3R 3314472..3314527 387..332 190 89.2 Minus
3R 31820162 3R 3327038..3327093 387..332 190 89.2 Minus
3R 31820162 3R 3309264..3309319 387..332 190 89.2 Minus
2L 23513712 2L 23071102..23071188 671..756 185 82.7 Plus
Blast to na_te.dros performed 2019-03-15 17:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy8 4955 gypsy8 GYPSY8 4955bp 3..117 235..345 196 69.5 Plus
gypsy8 4955 gypsy8 GYPSY8 4955bp 4654..4768 235..345 196 69.5 Plus
Cr1a 4470 Cr1a DMCR1A 4470bp 874..937 65..128 185 76.6 Plus

AT11374.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:40:47 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 23998839..24000067 132..1360 99 <- Minus
chr3L 24000140..24000270 1..131 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:00:02 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..228 683..910 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:33:14 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..228 683..910 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:05:50 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..228 683..910 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:59:11 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..1360 1..1360 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:33:14 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..1360 1..1360 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 02:43:09 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:05:51 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 1..1360 1..1360 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 21:44:01 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:47 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24009932..24011160 132..1360 100 <- Minus
3L 24011233..24011363 1..131 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:47 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24009932..24011160 132..1360 100 <- Minus
3L 24011233..24011363 1..131 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:47 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24009932..24011160 132..1360 100 <- Minus
3L 24011233..24011363 1..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:43:09 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003032..24004260 132..1360 100 <- Minus
arm_3L 24004333..24004463 1..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:43:09 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003032..24004260 132..1360 100 <- Minus
arm_3L 24004333..24004463 1..131 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:39:39 Download gff for AT11374.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24003032..24004260 132..1360 100 <- Minus
3L 24004333..24004463 1..131 100   Minus

AT11374.hyp Sequence

Translation from 682 to 909

> AT11374.hyp
MAGIKAVVANIRSKEDTIKLLLRKTKHDSRHQTSGENCDEGVRYQRSIDR
KWIFNTRSQCGEQSAKHGNTYMNRK*
Sequence AT11374.hyp has no blast hits.

AT11374.pep Sequence

Translation from 682 to 909

> AT11374.pep
MAGIKAVVANIRSKEDTIKLLLRKTKHDSRHQTSGENCDEGVRYQRSIDR
KWIFNTRSQCGEQSAKHGNTYMNRK*
Sequence AT11374.pep has no blast hits.