AT11933.complete Sequence
1016 bp (1016 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011564
> AT11933.complete
CAGCACTCTCCGGGGAATTTACACGTGCACTTGCAACGCTTTCAAATTTG
CGACCAGGCTTTGCCATGGACGAGTTACTAAATCTGGGTCTCAACGGCAT
ACAGTTTGAACTGGAGGAATCTGCGGCGGATAGCGACGAGGACAGTGAAG
GAGGAGGAGCACTGGGCGGTTCTGATACCACATTGCTGTACTATTTTAGA
AGATTGTACCATGTTCTCAGTGGGAATATCTTCATGACCACCTACGTGGA
GCGCGGGCAGAGAGAATACTTTGCAGGATTCAGCAACGTGGAATTGGTGG
CTCCGTTCCAGGGTGAACGACAGAGCCAGCGGTACCGCTGGATCCACCTG
TCGCTCATCTTCCGCGCCTTCAGATCCAAGACAGAGTCCTGGTGATGATA
CCCCACCGTGTCACAGCCAAATTGAAATTCCATTTGGCATTTGTTCCGAG
TTGTTGGCCCATCTAGTTTCATTTTGCGTCCTGGCTTTCGCTTCTGACCC
ACCCCAAAGTCCACAACTCTGCCCTTTTCGGTTCCCCTGTGTAAGTGGGT
GTGTGTGTGTTTGTGTGTGACATTTTGGCAGCAGTTCAACGGAAAAACGT
TTGGCAGCACGGCCAGAAAATGATAAGCCTGGCCAGCGAGAAAGAAAAGC
GGGTGGAAACAACCCAGGAATCGGTTCACTGAGTAAAATAAAAATTGGAA
AAAGTGTAATTGAAATGCAATGCACGAGAGGAGCGAAGGGTTGCCATGGT
GGATTTCAAGGAAGCAATTCGGAAGAGACTTTCTTCAATGCCACCATAAG
GTTTCCTGCCATCAAGGCTGCGGGTTAAGGTGCCACGAAATAAACTTAAC
CATCTAGTTATGTTCTTAGCATTTAATTTATACAGCTCAGAATATAAGAA
ATGAAAAAAGAATGTACGCTCTTTAAAGGATCCTTGACTAAATGTTCAAT
TCTTGCATGTATTTTAGTATATTCTGAATATAAGAACGATATAATCTAAA
AAAAAAAAAAAAAAAA
AT11933.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12347-RA | 714 | CG12347-RA | 20..714 | 1..695 | 3445 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:23:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 13730810..13731797 | 1..988 | 4790 | 99 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:46:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:23:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17906464..17907451 | 1..988 | 4790 | 99 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:52:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 17647295..17648282 | 1..988 | 4790 | 98.9 | Plus |
Blast to na_te.dros performed on 2019-03-15 23:23:06 has no hits.
AT11933.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:24:17 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 13730810..13731803 | 1..997 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:01:33 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 1..330 | 66..395 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:40:57 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 1..330 | 66..395 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:40:07 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 1..330 | 66..395 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:29:48 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 1..330 | 66..395 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:31:47 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 1..330 | 66..395 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:50:05 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 20..714 | 1..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:40:57 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 20..714 | 1..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:40:07 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RB | 1..988 | 1..988 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:29:48 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RA | 20..714 | 1..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:31:47 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12347-RB | 1..988 | 1..988 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:17 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17906464..17907457 | 1..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:17 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17906464..17907457 | 1..997 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:17 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17906464..17907457 | 1..997 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:40:07 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13732186..13733179 | 1..997 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:02:12 Download gff for
AT11933.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17647295..17648288 | 1..997 | 98 | | Plus |
AT11933.hyp Sequence
Translation from 2 to 394
> AT11933.hyp
ALSGEFTRALATLSNLRPGFAMDELLNLGLNGIQFELEESAADSDEDSEG
GGALGGSDTTLLYYFRRLYHVLSGNIFMTTYVERGQREYFAGFSNVELVA
PFQGERQSQRYRWIHLSLIFRAFRSKTESW*
AT11933.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:05:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12347-PB | 109 | CG12347-PB | 1..109 | 22..130 | 568 | 100 | Plus |
CG12347-PA | 109 | CG12347-PA | 1..109 | 22..130 | 568 | 100 | Plus |
AT11933.pep Sequence
Translation from 65 to 394
> AT11933.pep
MDELLNLGLNGIQFELEESAADSDEDSEGGGALGGSDTTLLYYFRRLYHV
LSGNIFMTTYVERGQREYFAGFSNVELVAPFQGERQSQRYRWIHLSLIFR
AFRSKTESW*
AT11933.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:08:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16748-PA | 127 | GF16748-PA | 1..115 | 1..101 | 255 | 49.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:08:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22570-PA | 112 | GG22570-PA | 1..108 | 1..104 | 295 | 67.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12347-PB | 109 | CG12347-PB | 1..109 | 1..109 | 568 | 100 | Plus |
CG12347-PA | 109 | CG12347-PA | 1..109 | 1..109 | 568 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15268-PA | 108 | GM15268-PA | 1..108 | 1..109 | 487 | 87.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD19191-PA | 108 | GD19191-PA | 1..108 | 1..109 | 485 | 87.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:08:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25502-PA | 112 | GE25502-PA | 1..112 | 1..108 | 386 | 77.7 | Plus |