BDGP Sequence Production Resources |
Search the DGRC for AT12292
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 122 |
Well: | 92 |
Vector: | pOTB7 |
Associated Gene/Transcript | Prosbeta2R1-RA |
Protein status: | AT12292.pep: gold |
Preliminary Size: | 924 |
Sequenced Size: | 1049 |
Gene | Date | Evidence |
---|---|---|
CG18341 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18341 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18341 | 2003-01-22 | Blastp of sequenced clone |
CG18341 | 2008-04-29 | Release 5.5 accounting |
CG18341 | 2008-08-15 | Release 5.9 accounting |
CG18341 | 2008-12-18 | 5.12 accounting |
1049 bp (1049 high quality bases) assembled on 2003-01-22
GenBank Submission: BT003647
> AT12292.complete ACGATGCTCTTTCCTTTTTCCGCCCGAAAGGCGAATACATCCGCTGATTT TGTTGGCTTGCGGTCCGGATTCAACTTTATAAATTGCAGGCGAAATGCCG AGCTTTTGTCCAAGGGATATGAGCCACCGAAGGCGATCAAAACAGGCACC TCCATTGTGGGCATCATCTACAAGGACGGCGTTATCCTGGGCGCCGACAC TCGCGCCACCGAGGGACCCATTGTTTCCGACAAGAATTGCTCAAAAATTC ACCACCTTCAGGATCACATATACTGTTGTGGCGCGGGCACCGCTGCCGAC ACCGAAATGATTACCCTGACGACCAGCGCCGAGCTGGATTTGCATCGGCT GAACACCGAACGACGGGTGCCGGTAGTCTGTGCGAGCATGATGCTTCGCA GGACCCTCTTTCGCTACCAGGGCCACATTGGTGCCGCCTTGGTGATGGGC GGCGTGGACACGACTGGGCCGCAGCTCTACTGCATCTATCCGTGCGGTTC CAACGATAAGATACCCTACGCGGCCATGGGCTCCGGCACCTTGGCAGCCA TGTCGGTGCTGGAGCACGGCTGGAAGCCCGATCTCGACCTGGAGCAGGGC AAGCAGCTGGTCCGCGAGGCCATCTCGGCGGGTGTGTTCAACGACCTGGG CTCCGGATCCAATATCGATCTATGCGTGATCACCGCAAAGGGAGCGGTTT ACCTGAGAACCGATACGATTGCCAGCGAGAAGGGCGAGCGGTTGGGCAAA TACGGCATTAAGCCCAACTCCACTATGGTCACCTCGATCTCCGTGCTGAG TCTGCAGGTCACCGATGAGCGAATCTATGCAGTGGATGATCAACAGCCGG GCACCAGTGGCGTTCAGTTGGATTCCCAGCAAGCGGATGAGGAACTGCCC GAAGGATCGCAAACTAAATCACCATAGACACCCATACCATATATTTCAGT TCGAGCAAATTAACCGTTAAATAGCCACATGGCTTTACATAAATGATAAT GCATTCACAGAATGCAGAGATTGCCTAGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 5701826..5702581 | 273..1028 | 3780 | 100 | Plus |
chrX | 22417052 | chrX | 5701574..5701754 | 92..272 | 875 | 98.9 | Plus |
chrX | 22417052 | chrX | 5701424..5701515 | 1..92 | 460 | 100 | Plus |
chr3L | 24539361 | chr3L | 14990301..14990419 | 122..240 | 280 | 82.4 | Plus |
chr3L | 24539361 | chr3L | 14991036..14991125 | 592..681 | 195 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 5809403..5810161 | 273..1031 | 3645 | 98.7 | Plus |
X | 23542271 | X | 5809151..5809331 | 92..272 | 890 | 99.4 | Plus |
X | 23542271 | X | 5809003..5809094 | 1..92 | 460 | 100 | Plus |
3L | 28110227 | 3L | 15000229..15000347 | 122..240 | 280 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 5817501..5818259 | 273..1031 | 3645 | 98.6 | Plus |
X | 23527363 | X | 5817249..5817429 | 92..272 | 890 | 99.4 | Plus |
X | 23527363 | X | 5817101..5817192 | 1..92 | 460 | 100 | Plus |
3L | 28103327 | 3L | 14993329..14993447 | 122..240 | 280 | 82.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5701424..5701515 | 1..92 | 100 | -> | Plus |
chrX | 5701575..5701754 | 93..272 | 98 | -> | Plus |
chrX | 5701826..5702581 | 273..1028 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18341-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18341-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18341-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 1..1028 | 1..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 50..1077 | 1..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18341-RA | 1..924 | 4..927 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prosbeta2R1-RA | 50..1077 | 1..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5809152..5809331 | 93..272 | 99 | -> | Plus |
X | 5809003..5809094 | 1..92 | 100 | -> | Plus |
X | 5809403..5810158 | 273..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5809152..5809331 | 93..272 | 99 | -> | Plus |
X | 5809003..5809094 | 1..92 | 100 | -> | Plus |
X | 5809403..5810158 | 273..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5809152..5809331 | 93..272 | 99 | -> | Plus |
X | 5809003..5809094 | 1..92 | 100 | -> | Plus |
X | 5809403..5810158 | 273..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5703185..5703364 | 93..272 | 99 | -> | Plus |
arm_X | 5703036..5703127 | 1..92 | 100 | -> | Plus |
arm_X | 5703436..5704191 | 273..1028 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 5817501..5818256 | 273..1028 | 98 | Plus | |
X | 5817101..5817192 | 1..92 | 100 | -> | Plus |
X | 5817250..5817429 | 93..272 | 99 | -> | Plus |
Translation from 1 to 926
> AT12292.hyp TMLFPFSARKANTSADFVGLRSGFNFINCRRNAELLSKGYEPPKAIKTGT SIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAAD TEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMG GVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQG KQLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGK YGIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDSQQADEELP EGSQTKSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta2R1-PA | 307 | CG18341-PA | 1..307 | 2..308 | 1588 | 100 | Plus |
Prosbeta2-PA | 272 | CG3329-PA | 11..267 | 21..278 | 860 | 64.7 | Plus |
Prosbeta2R2-PA | 322 | CG12161-PA | 22..266 | 22..265 | 516 | 43.3 | Plus |
Prosbeta1-PA | 224 | CG8392-PA | 12..212 | 46..242 | 233 | 27.4 | Plus |
Prosbeta5-PA | 282 | CG12323-PA | 73..258 | 49..233 | 224 | 32.3 | Plus |
Translation from 3 to 926
> AT12292.pep MLFPFSARKANTSADFVGLRSGFNFINCRRNAELLSKGYEPPKAIKTGTS IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADT EMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGG VDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGK QLVREAISAGVFNDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKY GIKPNSTMVTSISVLSLQVTDERIYAVDDQQPGTSGVQLDSQQADEELPE GSQTKSP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21212-PA | 322 | GF21212-PA | 1..320 | 1..305 | 1281 | 75 | Plus |
Dana\GF23798-PA | 272 | GF23798-PA | 11..262 | 20..271 | 830 | 65.5 | Plus |
Dana\GF20928-PA | 1093 | GF20928-PA | 22..266 | 21..264 | 492 | 40.8 | Plus |
Dana\GF19078-PA | 569 | GF19078-PA | 13..210 | 45..238 | 264 | 31.8 | Plus |
Dana\GF13778-PA | 284 | GF13778-PA | 73..258 | 48..232 | 229 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18789-PA | 307 | GG18789-PA | 1..307 | 1..307 | 1428 | 86.3 | Plus |
Dere\GG15711-PA | 272 | GG15711-PA | 11..267 | 20..277 | 840 | 64.3 | Plus |
Dere\GG11178-PA | 322 | GG11178-PA | 22..297 | 21..297 | 507 | 39.6 | Plus |
Dere\GG22308-PA | 224 | GG22308-PA | 12..212 | 45..241 | 239 | 27.4 | Plus |
Dere\GG20151-PA | 282 | GG20151-PA | 73..258 | 48..232 | 231 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12772-PA | 300 | GH12772-PA | 6..298 | 10..307 | 1117 | 70.1 | Plus |
Dgri\GH16666-PA | 272 | GH16666-PA | 11..267 | 20..277 | 876 | 65.5 | Plus |
Dgri\GH17051-PA | 299 | GH17051-PA | 27..244 | 51..264 | 350 | 35.8 | Plus |
Dgri\GH19825-PA | 222 | GH19825-PA | 12..198 | 45..230 | 232 | 27.8 | Plus |
Dgri\GH20460-PA | 280 | GH20460-PA | 73..258 | 48..232 | 219 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prosbeta2R1-PA | 307 | CG18341-PA | 1..307 | 1..307 | 1588 | 100 | Plus |
Prosbeta2-PA | 272 | CG3329-PA | 11..267 | 20..277 | 860 | 64.7 | Plus |
Prosbeta2R2-PA | 322 | CG12161-PA | 22..266 | 21..264 | 516 | 43.3 | Plus |
Prosbeta1-PA | 224 | CG8392-PA | 12..212 | 45..241 | 233 | 27.4 | Plus |
Prosbeta5-PA | 282 | CG12323-PA | 73..258 | 48..232 | 224 | 32.3 | Plus |
Prosbeta5-PB | 282 | CG12323-PB | 73..258 | 48..232 | 224 | 32.3 | Plus |
Prosbeta5R1-PA | 315 | CG9868-PA | 71..254 | 48..230 | 204 | 31 | Plus |
Prosbeta5R2-PB | 279 | CG31742-PB | 71..247 | 48..223 | 185 | 27.7 | Plus |
Prosbeta5R2-PA | 279 | CG31742-PA | 71..247 | 48..223 | 185 | 27.7 | Plus |
Prosbeta4R1-PA | 215 | CG17301-PA | 3..204 | 50..247 | 161 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15360-PA | 313 | GI15360-PA | 15..271 | 19..275 | 1086 | 77.8 | Plus |
Dmoj\GI11352-PA | 270 | GI11352-PA | 11..265 | 20..277 | 897 | 64.7 | Plus |
Dmoj\GI12054-PA | 322 | GI12054-PA | 16..234 | 22..239 | 417 | 38.4 | Plus |
Dmoj\GI20414-PA | 222 | GI20414-PA | 12..213 | 45..242 | 228 | 26.7 | Plus |
Dmoj\GI18886-PA | 279 | GI18886-PA | 73..258 | 48..232 | 226 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15166-PA | 327 | GL15166-PA | 17..277 | 17..277 | 1135 | 79.3 | Plus |
Dper\GL24711-PA | 272 | GL24711-PA | 12..267 | 21..277 | 823 | 63.4 | Plus |
Dper\GL21838-PA | 312 | GL21838-PA | 9..292 | 9..304 | 462 | 35.2 | Plus |
Dper\GL22004-PA | 298 | GL22004-PA | 17..269 | 23..274 | 430 | 37.9 | Plus |
Dper\GL10209-PA | 225 | GL10209-PA | 12..213 | 45..242 | 230 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14896-PA | 327 | GA14896-PA | 17..277 | 17..277 | 1135 | 79.3 | Plus |
Dpse\GA17382-PA | 272 | GA17382-PA | 12..267 | 21..277 | 821 | 63.4 | Plus |
Dpse\GA26418-PA | 312 | GA26418-PA | 9..292 | 9..304 | 474 | 35.9 | Plus |
Dpse\GA27343-PA | 251 | GA27343-PA | 21..241 | 21..240 | 447 | 41.2 | Plus |
Dpse\GA21041-PA | 225 | GA21041-PA | 12..213 | 45..242 | 230 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12440-PA | 307 | GM12440-PA | 1..307 | 1..307 | 1573 | 95.8 | Plus |
Dsec\GM25498-PA | 272 | GM25498-PA | 11..267 | 20..277 | 841 | 64.7 | Plus |
Dsec\GM10658-PA | 322 | GM10658-PA | 22..228 | 21..226 | 499 | 45.9 | Plus |
Dsec\GM20098-PA | 224 | GM20098-PA | 12..198 | 45..230 | 233 | 27.8 | Plus |
Dsec\GM21240-PA | 282 | GM21240-PA | 73..258 | 48..232 | 232 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16756-PA | 307 | GD16756-PA | 1..307 | 1..307 | 1560 | 94.8 | Plus |
Dsim\GD14518-PA | 272 | GD14518-PA | 11..267 | 20..277 | 844 | 65.1 | Plus |
Dsim\GD19639-PA | 322 | GD19639-PA | 22..228 | 21..226 | 498 | 46.4 | Plus |
Dsim\GD10758-PA | 282 | GD10758-PA | 73..258 | 48..232 | 232 | 32.8 | Plus |
Dsim\GD16019-PA | 206 | GD16019-PA | 5..194 | 56..241 | 210 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16628-PA | 304 | GJ16628-PA | 14..301 | 18..307 | 1108 | 71 | Plus |
Dvir\GJ11606-PA | 270 | GJ11606-PA | 9..265 | 20..277 | 854 | 65.5 | Plus |
Dvir\GJ13326-PA | 328 | GJ13326-PA | 16..278 | 22..282 | 452 | 35.7 | Plus |
Dvir\GJ20086-PA | 222 | GJ20086-PA | 12..198 | 45..230 | 233 | 27.7 | Plus |
Dvir\GJ21921-PA | 279 | GJ21921-PA | 73..258 | 48..232 | 222 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25153-PA | 353 | GK25153-PA | 22..282 | 20..277 | 1075 | 75.5 | Plus |
Dwil\GK10550-PA | 272 | GK10550-PA | 11..267 | 20..277 | 897 | 64.7 | Plus |
Dwil\GK18404-PA | 359 | GK18404-PA | 22..228 | 21..226 | 485 | 42.5 | Plus |
Dwil\GK21488-PA | 225 | GK21488-PA | 9..216 | 43..246 | 243 | 27.9 | Plus |
Dwil\GK19557-PA | 362 | GK19557-PA | 71..254 | 48..230 | 221 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16434-PA | 315 | GE16434-PA | 1..315 | 1..307 | 1451 | 88.6 | Plus |
Dyak\GE22042-PA | 272 | GE22042-PA | 11..267 | 20..277 | 840 | 64.3 | Plus |
Dyak\GE25306-PA | 324 | GE25306-PA | 22..266 | 21..264 | 511 | 41.6 | Plus |
Dyak\GE14105-PA | 224 | GE14105-PA | 12..212 | 45..241 | 240 | 27.4 | Plus |
Dyak\Prosbeta5-PA | 282 | GE12841-PA | 73..258 | 48..232 | 232 | 32.8 | Plus |