BDGP Sequence Production Resources |
Search the DGRC for AT12403
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 124 |
Well: | 3 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15572-RA |
Protein status: | AT12403.pep: gold |
Preliminary Size: | 1458 |
Sequenced Size: | 2413 |
Gene | Date | Evidence |
---|---|---|
CG15572 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15572 | 2002-05-17 | Blastp of sequenced clone |
CG15572 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15572 | 2008-04-29 | Release 5.5 accounting |
CG15572 | 2008-08-15 | Release 5.9 accounting |
CG15572 | 2008-12-18 | 5.12 accounting |
2413 bp (2413 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118685
> AT12403.complete ACACATACACCCTCCATTCGATCGGCAAAATTTATCTTTCGGCAACATAC TAAAAACTGTTGTAAATTATCGTATCTGTATCGTGTTCTTCTGTTGGATT ATTGGTCCCAAGTGTGTAGACGACTGCCCGTTCTCCGGTTTTCCTCCAGA CCGTAATAAGATAACCGCAGAAAAGTCCAACGAAGCAGCTCAACAAAAAT TCTAAATATAATACCGAGAATAATCATCAACCATCAAATACATCAGTCCA CTAGCCGAATTAGCAAGCACTGTCCTGTAACCAGCATACCACGCCTTTGG GAATATCTATTGTGACAGAGGACGAGCAATGGAGGATTTGCATTTAAAAC TCGGCGATCTGCCCCAGGAAGTATTGGCTGCACGGCACAGCATGATTATG GGCCAAAAGTTGGCTGGATCACTTGGTGAGACACAGCATCACCTTCAGCA TCAACATCACCTGAATCACCAACTGAACCAGCTCAATCAGTTGAGCCACT TGAATCAGTTCCATCAGTTAAACCAATTGAATCAATTGAGTCAGCTACAC CAGCATATACAACATAAGATCTCTTCGGGGATGAACCTAAATTTGGATCT GGACCATAAGATGGAGACGGAGATGGAGTTGGGTCTGGGCCTTGATGTGG ATGTGAATCTGGGAGTTAATCTGGACATGAATCCGGAGGGCAGTATTACC AATAGTACCAGCCGTACCAGCAGTGCTAGCAGGACCAGCAGCACCAACAC GTGCAGCGATCAGGGGCAAGGACATGGATCTGGGATTGGACTTGGTGACC CAAAGCGGGACCAAAGCCAAGTCCACTACGCCCATGACCCTGCCCAGGAT AATGGCGATTCACCGAATGTCAAGAGTTGTACTGGAATGTGCAGCCATCA AACAGAGAGCAATATGAATAAGGGGGATTCCCTAACGCATACCAAGTCTT CATCGCCGAAGACGGACAAGGGGGAGAAGGATAAGGAGGAGCTTAAAGCG AAGGAGGAGGAGGAGGAGGAGTTTAAAGAGGATACGGAGGATAAGAAGGA TAACGAGGACGTTTTCCAGAAACAGGAACCGTCTTCTTCCATGTTGATTA AGGCGGCCAACTCCAAGCTAAATGTCAATGCCACTGTTTACACGATGCCA GCCAAAGTAGAACCCCTTCATGACGGATCATTCGTGCCCCAACCGAGTTC CAGTGCCACCTCACAGGGCACTGGGGACTATCGCCTCAATGCCCAGGCTG CTGTATTCAAGCCATCTTTGATGTGCATTTGCTCGTTGGCTTCGCCGGTG GTTTTGCAACGACTACGTCCGATTGTAGTACGGCCACCACTACCGGGGGT ATCGCAACACCTGATGTCGGACATTTCACAGCCTCTACTGCCGAACTCGC CACTGATGAGCCACGAGTTCTTAGCCCATGGTTTTCATCCAATGCAAAGG TCGGGCCATAAACCAAGTGGCCGCTGGCGCAAACAACCGCTTCCGGACTT GTTCAGCGCCGTCATGTCACTGGTGACGGAACTGAAGCGATCGGTGAGCT ATCCGGAGATCATAAGCTGCCTATCCAAGAGACTCCATCGAGCGGAGGTG GAACTGAAGCGCCATGTACCGCACACATTGCACGCCGCCGTTAACAATGG CTATTTGAAGAAGGAGGGCAATCGCTATTCCCTGCTCCCCGAAGTGGAAC AGGCTGAGATCATGCGACGCAACATCGCGGATGCTCTTCGGGCCAAGGAG CTGGAGAAGGAGCCGTTGTCCTGGCGCAGGCGTTAATGTACGCAAAACCA ATCCTCAACTACGTTCACAACCTGGCATCTACACGCATCATCCCGCATCC CGCAATCCACATTCTGCATCCTGCATCTTTATCATCGCATTTCATATCCT TCTGCTTCATACATTTTATAATTAAGCTTGCACAGCACTCGAGGCTGTGA GCATGTAGTCCTGTGCGTTGCACAACCCAGAGCCCCGAGTTCTGTGCCGC CGACGAGCCCCGCAATTTGGTTTTACTGTACGTGACCTACGTCTGCGAAA CAGCGGTCCGTGTGATCCTCGATGCGTGGCCTGTGCTTAAAGGCACGCAA TCTTCGATCCGCGATCGACGAGCAGAAGAAGAATTCACGATGACAAAAGT ATACATTGTATACAAGTCCAATGGGGACGGTTTAGTCGATATGCTGCCTC CAGAGGATATTTCGTTGCCTGATGTTCCCTTCAGCGTTAAAACAATCACG TTTTTCTGGTTAAGCGCTTTATTATTGCAAGCTATTCGGGTAAATTCATC AAACTTATTAATGGATGGAGATGTGGGGTTAATAAATGGCTTCCGCTAAT TGGTATGATTACGTAAGACCTACGCAGTTATAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15572-RA | 2385 | CG15572-RA | 3..2385 | 1..2383 | 11900 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4161759..4164139 | 1..2381 | 11875 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4268703..4271086 | 1..2384 | 11905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4276801..4279184 | 1..2384 | 11905 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4161759..4162726 | 1..968 | 100 | == | Plus |
chrX | 4162780..4164139 | 1022..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 1..1458 | 329..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 1..1458 | 329..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 1..1458 | 329..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 1..1458 | 329..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 1..1458 | 329..1786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 3..2383 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 3..2383 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 3..2383 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 3..2383 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15572-RA | 3..2383 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4268703..4271083 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4268703..4271083 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4268703..4271083 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4162736..4165116 | 1..2381 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4276801..4279181 | 1..2381 | 99 | Plus |
Translation from 328 to 1785
> AT12403.hyp MEDLHLKLGDLPQEVLAARHSMIMGQKLAGSLGETQHHLQHQHHLNHQLN QLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISSGMNLNLDLDHKMETEME LGLGLDVDVNLGVNLDMNPEGSITNSTSRTSSASRTSSTNTCSDQGQGHG SGIGLGDPKRDQSQVHYAHDPAQDNGDSPNVKSCTGMCSHQTESNMNKGD SLTHTKSSSPKTDKGEKDKEELKAKEEEEEEFKEDTEDKKDNEDVFQKQE PSSSMLIKAANSKLNVNATVYTMPAKVEPLHDGSFVPQPSSSATSQGTGD YRLNAQAAVFKPSLMCICSLASPVVLQRLRPIVVRPPLPGVSQHLMSDIS QPLLPNSPLMSHEFLAHGFHPMQRSGHKPSGRWRKQPLPDLFSAVMSLVT ELKRSVSYPEIISCLSKRLHRAEVELKRHVPHTLHAAVNNGYLKKEGNRY SLLPEVEQAEIMRRNIADALRAKELEKEPLSWRRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15572-PA | 485 | CG15572-PA | 1..485 | 1..485 | 2534 | 100 | Plus |
Translation from 328 to 1785
> AT12403.pep MEDLHLKLGDLPQEVLAARHSMIMGQKLAGSLGETQHHLQHQHHLNHQLN QLNQLSHLNQFHQLNQLNQLSQLHQHIQHKISSGMNLNLDLDHKMETEME LGLGLDVDVNLGVNLDMNPEGSITNSTSRTSSASRTSSTNTCSDQGQGHG SGIGLGDPKRDQSQVHYAHDPAQDNGDSPNVKSCTGMCSHQTESNMNKGD SLTHTKSSSPKTDKGEKDKEELKAKEEEEEEFKEDTEDKKDNEDVFQKQE PSSSMLIKAANSKLNVNATVYTMPAKVEPLHDGSFVPQPSSSATSQGTGD YRLNAQAAVFKPSLMCICSLASPVVLQRLRPIVVRPPLPGVSQHLMSDIS QPLLPNSPLMSHEFLAHGFHPMQRSGHKPSGRWRKQPLPDLFSAVMSLVT ELKRSVSYPEIISCLSKRLHRAEVELKRHVPHTLHAAVNNGYLKKEGNRY SLLPEVEQAEIMRRNIADALRAKELEKEPLSWRRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21482-PA | 778 | GF21482-PA | 665..778 | 372..485 | 450 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18701-PA | 472 | GG18701-PA | 1..472 | 1..485 | 1425 | 70.6 | Plus |
Dere\GG18700-PA | 150 | GG18700-PA | 11..81 | 384..454 | 147 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24672-PA | 189 | GH24672-PA | 94..189 | 390..485 | 258 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15572-PA | 485 | CG15572-PA | 1..485 | 1..485 | 2534 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16138-PA | 420 | GI16138-PA | 319..420 | 384..485 | 367 | 68.6 | Plus |
Dmoj\GI16408-PA | 128 | GI16408-PA | 6..81 | 379..454 | 152 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14190-PA | 501 | GL14190-PA | 398..501 | 382..485 | 394 | 74 | Plus |
Dper\GL14191-PA | 192 | GL14191-PA | 12..78 | 384..451 | 151 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13821-PA | 465 | GA13821-PA | 362..465 | 382..485 | 394 | 74 | Plus |
Dpse\GA11759-PA | 270 | GA11759-PA | 12..78 | 384..451 | 149 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12337-PA | 253 | GM12337-PA | 144..253 | 376..485 | 564 | 94.5 | Plus |
Dsec\GM12337-PA | 253 | GM12337-PA | 1..128 | 1..121 | 425 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16683-PA | 503 | GD16683-PA | 1..503 | 1..485 | 1769 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16413-PA | 467 | GJ16413-PA | 366..467 | 384..485 | 361 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17544-PA | 491 | GK17544-PA | 388..491 | 382..485 | 431 | 75 | Plus |
Dwil\GK15636-PA | 406 | GK15636-PA | 337..396 | 389..448 | 159 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16339-PA | 483 | GE16339-PA | 1..483 | 1..485 | 1478 | 73.3 | Plus |