BDGP Sequence Production Resources |
Search the DGRC for AT12418
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 124 |
Well: | 18 |
Vector: | pOTB7 |
Associated Gene/Transcript | asrij-RA |
Protein status: | AT12418.pep: gold |
Preliminary Size: | 774 |
Sequenced Size: | 1087 |
Gene | Date | Evidence |
---|---|---|
CG13533 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13533 | 2002-02-22 | Blastp of sequenced clone |
CG13533 | 2003-01-01 | Sim4 clustering to Release 3 |
asrij | 2008-04-29 | Release 5.5 accounting |
asrij | 2008-08-15 | Release 5.9 accounting |
asrij | 2008-12-18 | 5.12 accounting |
1087 bp (1087 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089314
> AT12418.complete ATCAACTGTAAATGAATGTTGTCTTTGTTATTTAGTTTTAACTTCTTAAA GAAAAAGGTTTTTAACCAGTTTAGGATAGACAAAGAGTCCCTATCGCAAC CATCGTGCATAGATCGACCATCACTAGTTCTGGAGATGTGCAGAAGTCAC TGGCCCGTTTCGCCGGCGACCAGGGTTGGCAAATCGGCTGCGCCGGTAGT TGGTCCGTTATACATTTCACAAATTCCACATTAAATTGTATCAGCATGGA CTCCCCGCTGAACGATGGCTCTCACCATCCACCGCCGCACGCTCCCCACC CCCTGGCGGACTATCAGTTTTCTGCGGAGGAGGTGAAGGCGTTACGTGAG TGCAACACTGAGTCTTTCTTCCAGCGCAGCCTGCCTTTCGGCACTGGACT GGGCCTGCTGGCCTACTTCGGCGTCAAGAACGGCTATTTGCAGGGACACG TCAAGTACGGCGCCGTGCCCAAGGTCGTGATGGGCGTCATTCTGGGCTAC TTTGTGGGCAAGTTCAGTTACCAGCAGAAGTGTGCCGAGAAGATCATGCG CCTACCCAACTCCCATCTGGGCGAGCTGCTGCGTCAGCGTAGACAGGGCG GCGGTGTCATCAGCTCCATCACACCGGACGAGAATCTGGGCAGGGCCTTC ACTCTGGCCCCCTTCTCGCCGAGCTCGGCGGACGTGTACAGCGATGAGGC GTATCAGCCCGGGAGGAGCACTTCTCTCAATCTGGACACGGAATCGCGCC CTACTTTGTCCGGCCTTGACGACATCTACCGCCCCACCCTGGACTCTGGT TCAATGCTGGAGGCGGAGTTGCCCTTGGAGCCGTCTAAGCCGGGCCAGTC TTACGAGGACCTGCGACGAAGGAACCGAGAAGAGTACTCAAAGCACCAGC AGAGTCCATACTCGCGACCTTACGAACCACCAGTTGCCGTTCAACAGCGA CCCGTGGAGCAGGCACAAAGTGAACCCGCTGGAAGGAAGAACCAATACGG CGACTCCTGGACTGATTAAGGTATTGTTATTTTGTTGGACATTAAACGCG CATAAAGTTCTGTGAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18773276..18773766 | 305..795 | 2455 | 100 | Plus |
chr2R | 21145070 | chr2R | 18772916..18773221 | 1..306 | 1530 | 100 | Plus |
chr2R | 21145070 | chr2R | 18773828..18774096 | 796..1064 | 1345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22886758..22887248 | 305..795 | 2455 | 100 | Plus |
2R | 25286936 | 2R | 22886398..22886703 | 1..306 | 1530 | 100 | Plus |
2R | 25286936 | 2R | 22887310..22887582 | 796..1068 | 1320 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22887957..22888447 | 305..795 | 2455 | 100 | Plus |
2R | 25260384 | 2R | 22887597..22887902 | 1..306 | 1530 | 100 | Plus |
2R | 25260384 | 2R | 22888509..22888781 | 796..1068 | 1320 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 3664..3709 | 86..39 | 109 | 72.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18772916..18773220 | 1..305 | 100 | -> | Plus |
chr2R | 18773277..18773766 | 306..795 | 100 | -> | Plus |
chr2R | 18773828..18774096 | 796..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..774 | 246..1019 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..774 | 246..1019 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..774 | 246..1019 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..774 | 246..1019 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..774 | 246..1019 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
asrij-RA | 1..1064 | 1..1064 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22886398..22886702 | 1..305 | 100 | -> | Plus |
2R | 22886759..22887248 | 306..795 | 100 | -> | Plus |
2R | 22887310..22887578 | 796..1064 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22886398..22886702 | 1..305 | 100 | -> | Plus |
2R | 22886759..22887248 | 306..795 | 100 | -> | Plus |
2R | 22887310..22887578 | 796..1064 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22886398..22886702 | 1..305 | 100 | -> | Plus |
2R | 22886759..22887248 | 306..795 | 100 | -> | Plus |
2R | 22887310..22887578 | 796..1064 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18773921..18774225 | 1..305 | 100 | -> | Plus |
arm_2R | 18774282..18774771 | 306..795 | 100 | -> | Plus |
arm_2R | 18774833..18775101 | 796..1064 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22887615..22887919 | 1..305 | 100 | -> | Plus |
2R | 22887976..22888465 | 306..795 | 100 | -> | Plus |
2R | 22888527..22888795 | 796..1064 | 98 | Plus |
Translation from 245 to 1018
> AT12418.hyp MDSPLNDGSHHPPPHAPHPLADYQFSAEEVKALRECNTESFFQRSLPFGT GLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQQKCAEKI MRLPNSHLGELLRQRRQGGGVISSITPDENLGRAFTLAPFSPSSADVYSD EAYQPGRSTSLNLDTESRPTLSGLDDIYRPTLDSGSMLEAELPLEPSKPG QSYEDLRRRNREEYSKHQQSPYSRPYEPPVAVQQRPVEQAQSEPAGRKNQ YGDSWTD*
Translation from 245 to 1018
> AT12418.pep MDSPLNDGSHHPPPHAPHPLADYQFSAEEVKALRECNTESFFQRSLPFGT GLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQQKCAEKI MRLPNSHLGELLRQRRQGGGVISSITPDENLGRAFTLAPFSPSSADVYSD EAYQPGRSTSLNLDTESRPTLSGLDDIYRPTLDSGSMLEAELPLEPSKPG QSYEDLRRRNREEYSKHQQSPYSRPYEPPVAVQQRPVEQAQSEPAGRKNQ YGDSWTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13552-PA | 259 | GF13552-PA | 1..259 | 1..257 | 1153 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22811-PA | 257 | GG22811-PA | 1..257 | 1..257 | 1301 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21455-PA | 259 | GH21455-PA | 1..259 | 1..257 | 1033 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
asrij-PA | 257 | CG13533-PA | 1..257 | 1..257 | 1365 | 100 | Plus |
asrij-PB | 258 | CG13533-PB | 1..258 | 1..257 | 1353 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19931-PA | 261 | GI19931-PA | 1..261 | 1..257 | 1047 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10133-PA | 260 | GL10133-PA | 1..260 | 1..257 | 1077 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12348-PA | 260 | GA12348-PA | 1..260 | 1..257 | 1074 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15968-PA | 257 | GM15968-PA | 1..257 | 1..257 | 1329 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11720-PA | 239 | GD11720-PA | 2..239 | 20..257 | 1235 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15098-PA | 264 | GJ15098-PA | 1..264 | 1..257 | 1060 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20790-PA | 265 | GK20790-PA | 1..265 | 1..257 | 1116 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14245-PA | 257 | GE14245-PA | 1..257 | 1..257 | 1297 | 95.3 | Plus |