BDGP Sequence Production Resources |
Search the DGRC for AT12494
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 124 |
Well: | 94 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG9306-RA |
Protein status: | AT12494.pep: gold |
Preliminary Size: | 619 |
Sequenced Size: | 678 |
Gene | Date | Evidence |
---|---|---|
CG9306 | 2001-12-16 | Blastp of sequenced clone |
CG9306 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9306 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9306 | 2008-04-29 | Release 5.5 accounting |
CG9306 | 2008-08-15 | Release 5.9 accounting |
CG9306 | 2008-12-18 | 5.12 accounting |
678 bp (678 high quality bases) assembled on 2001-12-16
GenBank Submission: AY070784
> AT12494.complete GTCGTTCTCTAAAATTATTTTTCGCTTCGCAACACATATTTTCAGGCGCA GGGCTTTAGAGCACTGGACTTTTGACAGCTGTTGTTGTTGTTGCCTCGGC TGCGGTAGCAAATTAATACAATTTAACCAATATAGTAAAAAACGATGGCC CAAGTTCCCTTGGCAATCGTCTCGCACAAGCGCCAGGTGTGCAGCCTGTA CAAGCGAGCACTGCGCAACTTAGAGTCGTGGTACGACCGACGCAATGTCT ACCGCTACCGCGCTGTGCAGCTGCGTGCTCGCTTCGACGAAAACCGCTCC AAAGATCTGGGCGAGGGCATCCGCCTCCTAGCCTGTGGACAAAGGGAGCT TTTCGAGACAAGGCATTTCCAGCCCCGAAACTTTGCCAACAGTGCCGGTG GCTGTGCTTTCGAACGAGAGGTGATTCCGCCCGACTGGGTCCTGGACTAC TGGCATCCCCTGGAGAAGGCCCAGTACCCCGAGTACTTTGCCAAGCGGGA GCAGCGCAAGAAGGAGTTTGTGACCTGGTGGGAGAAGCAGTACGGCAAGC CCGACCCCAAGGACCTGGGACACCACTAATCTTAGAGTACCGTAATCAAA TCACATCCAATCTTTGTCTTTAAAAGTAAATCTATTGGAACTCACATTAT GTGCTATTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9306-RA | 772 | CG9306-RA | 30..690 | 3..663 | 3305 | 100 | Plus |
CG9306.a | 716 | CG9306.a | 230..651 | 242..663 | 2110 | 100 | Plus |
CG9306.a | 716 | CG9306.a | 3..230 | 3..230 | 1140 | 100 | Plus |
CG31855-RA | 1136 | CG31855-RA | 1077..1136 | 663..604 | 300 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13368961..13369238 | 660..383 | 1390 | 100 | Minus |
chr2L | 23010047 | chr2L | 13369516..13369757 | 242..1 | 1210 | 100 | Minus |
chr2L | 23010047 | chr2L | 13369298..13369438 | 382..242 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13370284..13370564 | 663..383 | 1405 | 100 | Minus |
2L | 23513712 | 2L | 13370842..13371081 | 242..3 | 1200 | 100 | Minus |
2L | 23513712 | 2L | 13370624..13370764 | 382..242 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13370284..13370564 | 663..383 | 1405 | 100 | Minus |
2L | 23513712 | 2L | 13370842..13371081 | 242..3 | 1200 | 100 | Minus |
2L | 23513712 | 2L | 13370624..13370764 | 382..242 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6446..6482 | 108..72 | 113 | 78.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13369516..13369757 | 1..242 | 100 | Minus | |
chr2L | 13368961..13369238 | 383..660 | 100 | <- | Minus |
chr2L | 13369298..13369437 | 243..382 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..435 | 145..579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..435 | 145..579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..435 | 145..579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..435 | 145..579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..435 | 145..579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..660 | 1..660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..660 | 1..660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RB | 28..687 | 1..660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RA | 1..660 | 1..660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9306-RB | 28..687 | 1..660 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13370624..13370763 | 243..382 | 100 | <- | Minus |
2L | 13370842..13371083 | 1..242 | 99 | Minus | |
2L | 13370287..13370564 | 383..660 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13370624..13370763 | 243..382 | 100 | <- | Minus |
2L | 13370842..13371083 | 1..242 | 99 | Minus | |
2L | 13370287..13370564 | 383..660 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13370624..13370763 | 243..382 | 100 | <- | Minus |
2L | 13370842..13371083 | 1..242 | 99 | Minus | |
2L | 13370287..13370564 | 383..660 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13370287..13370564 | 383..660 | 100 | <- | Minus |
arm_2L | 13370624..13370763 | 243..382 | 100 | <- | Minus |
arm_2L | 13370842..13371083 | 1..242 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13370287..13370564 | 383..660 | 100 | <- | Minus |
2L | 13370624..13370763 | 243..382 | 100 | <- | Minus |
2L | 13370842..13371083 | 1..242 | 99 | Minus |
Translation from 144 to 578
> AT12494.pep MAQVPLAIVSHKRQVCSLYKRALRNLESWYDRRNVYRYRAVQLRARFDEN RSKDLGEGIRLLACGQRELFETRHFQPRNFANSAGGCAFEREVIPPDWVL DYWHPLEKAQYPEYFAKREQRKKEFVTWWEKQYGKPDPKDLGHH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21668-PA | 144 | GF21668-PA | 1..144 | 1..144 | 742 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10207-PA | 144 | GG10207-PA | 1..144 | 1..144 | 745 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13455-PA | 144 | GH13455-PA | 1..144 | 1..144 | 721 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-B22-PB | 144 | CG9306-PB | 1..144 | 1..144 | 796 | 100 | Plus |
ND-B22-PA | 144 | CG9306-PA | 1..144 | 1..144 | 796 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14070-PA | 144 | GI14070-PA | 1..144 | 1..144 | 700 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25714-PA | 144 | GL25714-PA | 1..144 | 1..144 | 702 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25406-PA | 144 | GA25406-PA | 1..144 | 1..144 | 706 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25609-PA | 144 | GM25609-PA | 1..144 | 1..144 | 752 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22067-PA | 144 | GD22067-PA | 1..144 | 1..144 | 752 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18263-PA | 144 | GJ18263-PA | 1..144 | 1..144 | 723 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14843-PA | 144 | GK14843-PA | 1..144 | 1..144 | 748 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11677-PA | 144 | GE11677-PA | 1..144 | 1..144 | 756 | 97.2 | Plus |
Translation from 144 to 578
> AT12494.hyp MAQVPLAIVSHKRQVCSLYKRALRNLESWYDRRNVYRYRAVQLRARFDEN RSKDLGEGIRLLACGQRELFETRHFQPRNFANSAGGCAFEREVIPPDWVL DYWHPLEKAQYPEYFAKREQRKKEFVTWWEKQYGKPDPKDLGHH*