BDGP Sequence Production Resources |
Search the DGRC for AT12527
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 125 |
Well: | 27 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG18675-RA |
Protein status: | AT12527.pep: gold |
Preliminary Size: | 762 |
Sequenced Size: | 1670 |
Gene | Date | Evidence |
---|---|---|
CG18675 | 2002-01-01 | Sim4 clustering to Release 2 |
CG18675 | 2002-02-22 | Blastp of sequenced clone |
CG18675 | 2008-04-29 | Release 5.5 accounting |
CG18675 | 2008-08-15 | Release 5.9 accounting |
tipE | 2008-08-15 | Release 5.9 accounting |
CG18675 | 2008-12-18 | 5.12 accounting |
tipE | 2008-12-18 | 5.12 accounting |
1670 bp (1670 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089317
> AT12527.complete AGTTGTTTGCCATTCCAGCTGTCGGCTTTTGTGACATTAGCAAATTGCTA TCCAGTCGATCGACACTTGATTGCTCTTGTGACTATATTTTCTGTGCGAA ATGGTGCTTCTCCAGGTGAAACGCGGAGACGAGCTTATCTTCCTCTATGA GACAAGCGTTAAGGAGAAGACCGATACTGTGCTTCGCGAGCTTGTGGCTC TGCACAATGGTCAACTGAAGATTCAGCGTGTCTGCATGGAGATTGAGGAG CTGGCCGAACATGGCACCATGGTGCCGCCTGAAATGATTGGCCTCAACGA GGAACAGAGGGAAGAGCTCAAGCTTAAGGATGTCTGGGCGGATAAGTGCA TCCCGTCTGGTGGTTTCACTATCAACAAGGATCCGCTCCTTCGCCGTAAC GGACAGCAGCCAACTGAGGCGATGCAAAAGGTCCTTGCAGGTGCCATGAA CGACGCCAAGGCTATGGTGGATCGGCGCTTAGCTAAATCCTCAAAGACCT TGACCCCAAAGATCGTTGAGGAGGCGTTGAACCTCCTGCGTGGTGGTGTC ACTATTGTATATCCCATGCAATTGCCGCCCCACGACTCCATACGCATGGA GTTCACCAATACCGAGGATCTGACTGGCACCCAGGCCTCCAAGGAGGTCA TCGAACCGTCCAAGGCTCAGTTCTGGTTTGCAGGACACCAGATGCTGATG GGGAAGCTAATGAGCGACTATTTGGGTCACAACGACAAAACCAAGGTGGT CGTGAAGCTGAATCAAATTGGTGAAGGACCACCGGGACGCGAAGCCGTGA TCTCCGATCCCTTGCGTCGCCAGATGATGGCCGAGGCCTATCGCCGCCAG GAGGAACTCAAGAAACTTGAGCAAGACGATGACGACGAGTATCTCAACTC CTCCTGGGCCGACAGCGGCAGTCTGAAACGTCAGGCGCATGGTCTGGAAA ATGTTAGATTCCGATTCAGAAAATGAGCCGCTACTGGACTCGTAGACCGC CGAGCGGTCAGCCACGGACCACGGAGCAGGCGGAGATCACCGGAGCGGAG ACCCAACCCGAAAAAGAACTCATGAGGCAACCGTAAAGCGATAAACCCCA AGTATTTCTACCCGAAACAATCGACAACAACGCAGCGAATGCGACCGAAC CTGAATACCTTCAGAGCTGTTAGCGGCACCTAATGAACTATGATAGATTA TATTTACCTTATGAACTAGCTACTCGGATTCACACCTACACTCACACAAA CACTCACCCACATTAAGCACGCTAGATAGCCGGAGTAACTCCGGACTGCC ACACCCACTCAAAATTGCAATGCACGGGCATTATAGTATGTGCACAGTAT CTGATATCTGGAGGATCTTAGGCGATTGGTACAAATACAATAAAAACATA GGCCGCATGGACTCGAGCATGGAGTGCTATTCATATACCTAGAGGAAAAA CTATAATACTTATACACGCATATACAAATATTTACTTGAATTATTTTTCT ATTCGCAACAATCGTCGTCGTCTCGAGGCAGAAACACAGATAAACTCCAC CAACTCCACTACCCCACTACCCATTGCCCAACATCCACAATTCAAAACCC AAATTCCAAATAGAGCAAATAAAAGCAAAAGAGAAACAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4191576..4192354 | 861..1637 | 3785 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 4173239..4173713 | 1..475 | 2330 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 4173779..4174051 | 475..747 | 1365 | 100 | Plus |
chr3L | 24539361 | chr3L | 4174110..4174228 | 744..862 | 580 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4192190..4192970 | 861..1639 | 3795 | 99.4 | Plus |
3L | 28110227 | 3L | 4173853..4174327 | 1..475 | 2330 | 99.4 | Plus |
3L | 28110227 | 3L | 4174393..4174665 | 475..747 | 1365 | 100 | Plus |
3L | 28110227 | 3L | 4174724..4174842 | 744..862 | 580 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4192190..4192970 | 861..1639 | 3805 | 99.3 | Plus |
3L | 28103327 | 3L | 4173853..4174327 | 1..475 | 2330 | 99.3 | Plus |
3L | 28103327 | 3L | 4174393..4174665 | 475..747 | 1365 | 100 | Plus |
3L | 28103327 | 3L | 4174724..4174842 | 744..862 | 580 | 99.1 | Plus |
3R | 31820162 | 3R | 18347402..18347455 | 1670..1617 | 210 | 92.5 | Minus |
2R | 25260384 | 2R | 513554..513607 | 1670..1617 | 210 | 92.5 | Minus |
3R | 31820162 | 3R | 13926350..13926403 | 1617..1670 | 195 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-C | 11124 | TART-C TARTC 11124bp | 654..763 | 1529..1636 | 130 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4173239..4173713 | 1..475 | 99 | -> | Plus |
chr3L | 4173780..4174049 | 476..745 | 100 | -> | Plus |
chr3L | 4174112..4174228 | 746..862 | 99 | -> | Plus |
chr3L | 4191578..4192354 | 863..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..876 | 101..976 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..876 | 101..976 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..876 | 101..976 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..876 | 101..976 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..876 | 101..976 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..1639 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..1639 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..1608 | 32..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..1639 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18675-RA | 1..1608 | 32..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4173853..4174327 | 1..475 | 99 | -> | Plus |
3L | 4174394..4174663 | 476..745 | 100 | -> | Plus |
3L | 4174726..4174842 | 746..862 | 99 | -> | Plus |
3L | 4192192..4192968 | 863..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4173853..4174327 | 1..475 | 99 | -> | Plus |
3L | 4174394..4174663 | 476..745 | 100 | -> | Plus |
3L | 4174726..4174842 | 746..862 | 99 | -> | Plus |
3L | 4192192..4192968 | 863..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4173853..4174327 | 1..475 | 99 | -> | Plus |
3L | 4174394..4174663 | 476..745 | 100 | -> | Plus |
3L | 4174726..4174842 | 746..862 | 99 | -> | Plus |
3L | 4192192..4192968 | 863..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4173853..4174327 | 1..475 | 99 | -> | Plus |
arm_3L | 4174394..4174663 | 476..745 | 100 | -> | Plus |
arm_3L | 4174726..4174842 | 746..862 | 99 | -> | Plus |
arm_3L | 4192192..4192968 | 863..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4174726..4174842 | 746..862 | 99 | -> | Plus |
3L | 4173853..4174327 | 1..475 | 99 | -> | Plus |
3L | 4174394..4174663 | 476..745 | 100 | -> | Plus |
3L | 4192192..4192968 | 863..1637 | 99 | Plus |
Translation from 100 to 975
> AT12527.pep MVLLQVKRGDELIFLYETSVKEKTDTVLRELVALHNGQLKIQRVCMEIEE LAEHGTMVPPEMIGLNEEQREELKLKDVWADKCIPSGGFTINKDPLLRRN GQQPTEAMQKVLAGAMNDAKAMVDRRLAKSSKTLTPKIVEEALNLLRGGV TIVYPMQLPPHDSIRMEFTNTEDLTGTQASKEVIEPSKAQFWFAGHQMLM GKLMSDYLGHNDKTKVVVKLNQIGEGPPGREAVISDPLRRQMMAEAYRRQ EELKKLEQDDDDEYLNSSWADSGSLKRQAHGLENVRFRFRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10560-PA | 270 | GF10560-PA | 1..254 | 1..254 | 1136 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15200-PA | 259 | GG15200-PA | 1..254 | 1..254 | 1263 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15929-PA | 258 | GH15929-PA | 1..254 | 1..254 | 1015 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18675-PA | 291 | CG18675-PA | 1..291 | 1..291 | 1495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16578-PA | 259 | GI16578-PA | 1..254 | 1..254 | 1018 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12832-PA | 258 | GL12832-PA | 1..254 | 1..254 | 1123 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15047-PA | 261 | GA15047-PA | 1..254 | 1..254 | 1119 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14631-PA | 264 | GM14631-PA | 1..255 | 1..255 | 1320 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13820-PA | 255 | GD13820-PA | 1..254 | 1..254 | 1312 | 96.9 | Plus |
Dsim\GD13821-PA | 434 | GD13821-PA | 397..434 | 254..291 | 196 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12830-PA | 256 | GJ12830-PA | 1..254 | 1..254 | 1067 | 76 | Plus |
Dvir\GJ12831-PA | 485 | GJ12831-PA | 448..485 | 254..291 | 190 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12707-PA | 265 | GK12707-PA | 1..257 | 1..257 | 1077 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21419-PA | 256 | GE21419-PA | 1..254 | 1..254 | 1281 | 94.5 | Plus |
Translation from 100 to 975
> AT12527.hyp MVLLQVKRGDELIFLYETSVKEKTDTVLRELVALHNGQLKIQRVCMEIEE LAEHGTMVPPEMIGLNEEQREELKLKDVWADKCIPSGGFTINKDPLLRRN GQQPTEAMQKVLAGAMNDAKAMVDRRLAKSSKTLTPKIVEEALNLLRGGV TIVYPMQLPPHDSIRMEFTNTEDLTGTQASKEVIEPSKAQFWFAGHQMLM GKLMSDYLGHNDKTKVVVKLNQIGEGPPGREAVISDPLRRQMMAEAYRRQ EELKKLEQDDDDEYLNSSWADSGSLKRQAHGLENVRFRFRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18675-PA | 291 | CG18675-PA | 1..291 | 1..291 | 1495 | 100 | Plus |