BDGP Sequence Production Resources |
Search the DGRC for AT12544
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 125 |
Well: | 44 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG12692-RB |
Protein status: | AT12544.pep: gold |
Preliminary Size: | 1569 |
Sequenced Size: | 1963 |
Gene | Date | Evidence |
---|---|---|
CG12692 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12692 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12692 | 2003-10-02 | Blastp of sequenced clone |
CG12692 | 2008-04-29 | Release 5.5 accounting |
CG12692 | 2008-08-15 | Release 5.9 accounting |
CG12692 | 2008-12-18 | 5.12 accounting |
1963 bp (1963 high quality bases) assembled on 2003-10-02
GenBank Submission: BT011009
> AT12544.complete GAAGACACTACTTTTAAAATTGTGTAGAATTCTTACAAGTTTTGTATATA TATATATTTTACTGCACTCGTTTGTGAAACGAAAATATGGGGCACATCGA TGGCACAAATAAACTGAAAGGCTTCGCTCGTCCCGCATTCACCAGCGAAC TGGCCTTCAATAGCGTGGTGCCATGGAGCAATGAGATCCATCGACGCCAC GGTGAGGCCATCCATCCGTGCAACGATGCGATGGACTTCCATGCGTCGGT GTTTAGAAGTCTGGGTGCCGTGACGCGTGTGTGCATTGGCACATCAACAT TTTGGTGTACTTCGTCACTTTTGCAATTTCATAGCAACTATTTTGATCGC AACATTTGTCCGGTGAATTGCTTTCGCGAGGGCACCGACCTTATTGCCGT GGGCTTTCGAGCTGCCTACACTTGGATGAGACTGCAGGAGCCACTGGATC CATTCATGCAACCAGATAAACTAATGACGCTCCTGCACACAGCCGTCCAG CTGGAGATGCCGGCACTGAAAGCATTGTGCTATGAACAACTGTGCACCGA TCGCTTTCGCGAGGAGACCGCCTTTCAGGTTTACTTGAGGGCTTTGAAAT ATCCGCAACTCGAGGAGCTGCGCAAACTGATGCTGCAAAGGATCGGTGCT GCTTTTCTGGCCGTGCTGGGTGGTGATGATTTTCAGCGAATGCCTCTCGA GGATGTGATTACCATGCTGCAGCAGGACTCATTGGGTGTCAATTCGGAAA TGGAGGTGCTTGTGGCCATTATAAGATGGCTGAATTGTCAATCGAAATGC ATTGACCAGGCGACGCCACTATTGATGGACTGCCTTCGGCTGACACTCTT ACCACTGCCAATTTTGAAAAGATTTTGGCGCTGTGCCATGGCACCACCGG TGCCCGACGAGCCCTTTATGAACGCTGTTCGTGGCAATATTCACATTCGT GAGAGGATCAGCTGTGCAATTACTGTGGTCCAAATGCACCATTTGCATAC AAGTCGTCGTGAGTTTCTCGACTTCTGTCGCTCCAAGGGCTTGCTGGTCG ATATGCCCAGGGAGTGGATATACGATGAGCAGTGCCATTATCATTTGCCG CGACCTGGTGGTCCCTACTCTCATCTTATCTGTGTTCATGTCATTTCGAA TTATGCGATACAAAGGGCTCAGCGTCTAATGGAATCCTCAAAGCGTTGGC CCAGACGTGTTAATACATACATGCCGCCGTCCGATGATCTACAGACCATC AATGAGCTGCCCGAGGACAAGGATGAGGAGGCGCAGGTGTCAGTAGAGCC ATCAGCGCCAGAAATGTCCGAAGGTCTACCGCAGCCCGAAGAGGATGATT GTTTCATTGCTCGCCTCTTTCGTGGCACACTATTGCGACTGAACGAAGTG ATGGCCGCGCAGGACAGAAATATTGAGCGACGCATTGACAATCTTATACG TGATGGTACATTAAGGCCCAGGTTTATACCCAACGCTATGTCGAGATTTG TATTGCCAACAGCAATGACTTGTGCTGCACAGGAAGATCTTCAAGAAGAT CTCTTTCTCCAAACCGATTTCTATTCGAGCAACCTGGACGCCATCGATGC GTATTTTTTTCTTCATGTCTGTCGAATGAGGCAGTTGGTCCAGCCGAAAG TTGTAGTTCCTATCGAGAAATCGTCCGAGGAGAGTGTGCGTCCCATGGAG AGCTATGTGCTCGAAACCGACCAAATGATCAAAGTCCTAGGCTTTTAAAT GTATATGAACATATATATATATATTTCGCATATGAGAAACACACATACTC CCCCCCCCCCCTAACCACACCCATTACACCCTTTAAATTACAGTTAACAA AATGACATAATAACAAATGTTCGATTGAAATGCCTCAAAAATGTATAAGA TCGATAAGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12692-RB | 1969 | CG12692-RB | 55..1960 | 5..1911 | 9495 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4193218..4194766 | 1911..362 | 7685 | 99.9 | Minus |
chrX | 22417052 | chrX | 4194861..4195148 | 368..81 | 1425 | 99.7 | Minus |
chrX | 22417052 | chrX | 4195331..4195407 | 81..5 | 385 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4193218..4194765 | 363..1911 | 99 | <- | Minus |
chrX | 4194867..4195147 | 82..362 | 100 | <- | Minus |
chrX | 4195331..4195412 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1662 | 87..1748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1662 | 87..1748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1662 | 87..1748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1662 | 87..1748 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1749 | 1..1748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1911 | 1..1911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1911 | 1..1911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1749 | 1..1748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12692-RB | 1..1911 | 1..1911 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4301801..4302081 | 82..362 | 100 | <- | Minus |
X | 4302265..4302346 | 1..81 | 98 | Minus | |
X | 4300152..4301699 | 363..1911 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4301801..4302081 | 82..362 | 100 | <- | Minus |
X | 4302265..4302346 | 1..81 | 98 | Minus | |
X | 4300152..4301699 | 363..1911 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4301801..4302081 | 82..362 | 100 | <- | Minus |
X | 4302265..4302346 | 1..81 | 98 | Minus | |
X | 4300152..4301699 | 363..1911 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4194185..4195732 | 363..1911 | 99 | <- | Minus |
arm_X | 4195834..4196114 | 82..362 | 100 | <- | Minus |
arm_X | 4196298..4196379 | 1..81 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4308250..4309797 | 363..1911 | 99 | <- | Minus |
X | 4309899..4310179 | 82..362 | 100 | <- | Minus |
X | 4310363..4310444 | 1..81 | 98 | Minus |
Translation from 86 to 1747
> AT12544.hyp MGHIDGTNKLKGFARPAFTSELAFNSVVPWSNEIHRRHGEAIHPCNDAMD FHASVFRSLGAVTRVCIGTSTFWCTSSLLQFHSNYFDRNICPVNCFREGT DLIAVGFRAAYTWMRLQEPLDPFMQPDKLMTLLHTAVQLEMPALKALCYE QLCTDRFREETAFQVYLRALKYPQLEELRKLMLQRIGAAFLAVLGGDDFQ RMPLEDVITMLQQDSLGVNSEMEVLVAIIRWLNCQSKCIDQATPLLMDCL RLTLLPLPILKRFWRCAMAPPVPDEPFMNAVRGNIHIRERISCAITVVQM HHLHTSRREFLDFCRSKGLLVDMPREWIYDEQCHYHLPRPGGPYSHLICV HVISNYAIQRAQRLMESSKRWPRRVNTYMPPSDDLQTINELPEDKDEEAQ VSVEPSAPEMSEGLPQPEEDDCFIARLFRGTLLRLNEVMAAQDRNIERRI DNLIRDGTLRPRFIPNAMSRFVLPTAMTCAAQEDLQEDLFLQTDFYSSNL DAIDAYFFLHVCRMRQLVQPKVVVPIEKSSEESVRPMESYVLETDQMIKV LGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12692-PC | 553 | CG12692-PC | 1..553 | 1..553 | 2932 | 100 | Plus |
CG12692-PB | 553 | CG12692-PB | 1..553 | 1..553 | 2932 | 100 | Plus |
CG9970-PA | 484 | CG9970-PA | 146..434 | 60..346 | 325 | 32.4 | Plus |
CG30357-PA | 451 | CG30357-PA | 173..393 | 107..336 | 212 | 28.8 | Plus |
CG12857-PA | 440 | CG12857-PA | 95..381 | 44..336 | 206 | 24.7 | Plus |
Translation from 86 to 1747
> AT12544.pep MGHIDGTNKLKGFARPAFTSELAFNSVVPWSNEIHRRHGEAIHPCNDAMD FHASVFRSLGAVTRVCIGTSTFWCTSSLLQFHSNYFDRNICPVNCFREGT DLIAVGFRAAYTWMRLQEPLDPFMQPDKLMTLLHTAVQLEMPALKALCYE QLCTDRFREETAFQVYLRALKYPQLEELRKLMLQRIGAAFLAVLGGDDFQ RMPLEDVITMLQQDSLGVNSEMEVLVAIIRWLNCQSKCIDQATPLLMDCL RLTLLPLPILKRFWRCAMAPPVPDEPFMNAVRGNIHIRERISCAITVVQM HHLHTSRREFLDFCRSKGLLVDMPREWIYDEQCHYHLPRPGGPYSHLICV HVISNYAIQRAQRLMESSKRWPRRVNTYMPPSDDLQTINELPEDKDEEAQ VSVEPSAPEMSEGLPQPEEDDCFIARLFRGTLLRLNEVMAAQDRNIERRI DNLIRDGTLRPRFIPNAMSRFVLPTAMTCAAQEDLQEDLFLQTDFYSSNL DAIDAYFFLHVCRMRQLVQPKVVVPIEKSSEESVRPMESYVLETDQMIKV LGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21477-PA | 832 | GF21477-PA | 60..409 | 24..369 | 855 | 47.4 | Plus |
Dana\GF21280-PA | 519 | GF21280-PA | 159..461 | 58..356 | 336 | 30.2 | Plus |
Dana\GF12567-PA | 929 | GF12567-PA | 289..510 | 106..336 | 260 | 32.3 | Plus |
Dana\GF11239-PA | 434 | GF11239-PA | 126..400 | 55..336 | 212 | 26.5 | Plus |
Dana\GF13514-PA | 442 | GF13514-PA | 119..407 | 61..356 | 198 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18549-PA | 593 | GG18549-PA | 1..580 | 1..548 | 1404 | 50.6 | Plus |
Dere\GG14493-PA | 478 | GG14493-PA | 140..438 | 60..356 | 354 | 32.2 | Plus |
Dere\GG10620-PA | 844 | GG10620-PA | 209..429 | 107..336 | 214 | 28 | Plus |
Dere\GG22401-PA | 441 | GG22401-PA | 97..413 | 43..369 | 201 | 25.3 | Plus |
Dere\GG11552-PA | 413 | GG11552-PA | 97..301 | 65..277 | 180 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21146-PA | 430 | GH21146-PA | 112..312 | 59..260 | 186 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12692-PC | 553 | CG12692-PC | 1..553 | 1..553 | 2932 | 100 | Plus |
CG12692-PB | 553 | CG12692-PB | 1..553 | 1..553 | 2932 | 100 | Plus |
CG9970-PA | 484 | CG9970-PA | 146..434 | 60..346 | 325 | 32.4 | Plus |
CG30357-PA | 451 | CG30357-PA | 173..393 | 107..336 | 212 | 28.8 | Plus |
CG12857-PA | 440 | CG12857-PA | 95..381 | 44..336 | 206 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14913-PA | 783 | GI14913-PA | 457..737 | 65..346 | 317 | 29.3 | Plus |
Dmoj\GI23030-PA | 407 | GI23030-PA | 87..350 | 64..337 | 214 | 26.4 | Plus |
Dmoj\GI18745-PA | 431 | GI18745-PA | 112..389 | 59..351 | 201 | 25.2 | Plus |
Dmoj\GI20387-PA | 503 | GI20387-PA | 157..453 | 31..336 | 201 | 25.2 | Plus |
Dmoj\GI20967-PA | 434 | GI20967-PA | 11..279 | 63..336 | 193 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14185-PA | 431 | GL14185-PA | 70..394 | 1..337 | 472 | 35 | Plus |
Dper\GL25890-PA | 427 | GL25890-PA | 100..408 | 60..367 | 331 | 29 | Plus |
Dper\GL23923-PA | 391 | GL23923-PA | 125..277 | 101..256 | 184 | 30.9 | Plus |
Dper\GL10625-PA | 336 | GL10625-PA | 21..287 | 59..336 | 178 | 25.4 | Plus |
Dper\GL14381-PA | 481 | GL14381-PA | 255..427 | 157..336 | 169 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11760-PA | 700 | GA11760-PA | 70..440 | 1..362 | 504 | 33.8 | Plus |
Dpse\GA25176-PA | 427 | GA25176-PA | 100..408 | 60..367 | 328 | 29 | Plus |
Dpse\GA11860-PA | 399 | GA11860-PA | 84..350 | 59..336 | 183 | 25.4 | Plus |
Dpse\GA27108-PA | 385 | GA27108-PA | 125..277 | 101..256 | 182 | 31.1 | Plus |
Dpse\GA27347-PA | 339 | GA27347-PA | 36..289 | 59..336 | 172 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12695-PA | 556 | GM12695-PA | 1..556 | 1..553 | 2003 | 69.4 | Plus |
Dsec\GM14096-PA | 465 | GM14096-PA | 127..431 | 60..360 | 318 | 30.4 | Plus |
Dsec\GM20186-PA | 444 | GM20186-PA | 98..410 | 43..362 | 205 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16301-PA | 565 | GD16301-PA | 1..565 | 1..553 | 1968 | 68.2 | Plus |
Dsim\GD13368-PA | 465 | GD13368-PA | 127..425 | 60..356 | 323 | 31.2 | Plus |
Dsim\GD25659-PA | 444 | GD25659-PA | 98..385 | 43..336 | 197 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18946-PA | 284 | GJ18946-PA | 15..245 | 130..357 | 274 | 29.7 | Plus |
Dvir\GJ20856-PA | 381 | GJ20856-PA | 122..353 | 121..349 | 209 | 29.7 | Plus |
Dvir\GJ24621-PA | 415 | GJ24621-PA | 95..360 | 63..339 | 205 | 26 | Plus |
Dvir\GJ21767-PA | 429 | GJ21767-PA | 112..387 | 59..351 | 190 | 23.9 | Plus |
Dvir\GJ22113-PA | 500 | GJ22113-PA | 179..450 | 64..336 | 177 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14125-PA | 450 | GK14125-PA | 126..414 | 60..346 | 363 | 32.1 | Plus |
Dwil\GK19524-PA | 376 | GK19524-PA | 65..275 | 65..281 | 223 | 31.2 | Plus |
Dwil\GK11754-PA | 437 | GK11754-PA | 87..351 | 60..336 | 209 | 26 | Plus |
Dwil\GK13774-PA | 798 | GK13774-PA | 396..674 | 60..338 | 208 | 26.8 | Plus |
Dwil\GK19618-PA | 440 | GK19618-PA | 114..314 | 59..260 | 193 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16863-PA | 554 | GE16863-PA | 27..544 | 36..551 | 1316 | 53.3 | Plus |
Dyak\GE21682-PA | 477 | GE21682-PA | 141..445 | 60..360 | 334 | 31.6 | Plus |
Dyak\GE22796-PA | 828 | GE22796-PA | 198..418 | 107..336 | 234 | 29.1 | Plus |
Dyak\GE11436-PA | 431 | GE11436-PA | 139..418 | 65..356 | 174 | 26.7 | Plus |
Dyak\GE20086-PA | 630 | GE20086-PA | 61..262 | 57..260 | 174 | 24.3 | Plus |