BDGP Sequence Production Resources |
Search the DGRC for AT12780
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 127 |
Well: | 80 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG3611-RA |
Protein status: | AT12780.pep: gold |
Preliminary Size: | 676 |
Sequenced Size: | 791 |
Gene | Date | Evidence |
---|---|---|
CG3611 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3611 | 2002-04-26 | Blastp of sequenced clone |
CG3611 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3611 | 2008-04-29 | Release 5.5 accounting |
CG3611 | 2008-08-15 | Release 5.9 accounting |
CG3611 | 2008-12-18 | 5.12 accounting |
791 bp (791 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113246
> AT12780.complete GTGACGAAAGTTAACTTAAACATGTACATAGGTTTCAGACTAGGCCAGTT CGTAAGCGTTAACAATTATGTGCAGAGTTTCTGCACAGGTGGCTGGCAGT GACCTGGATGCACTGCACCTGTCGTCTGTCAAGTGGCTGCTAATGCGATT AGGGAGCACACAGAAAACGGGATTGGCACTCGGGACTGGCAACTCAGCTG CCAATCAGGTGGGCCAGCCACAAACTTCACACATTTCGGACACATATATC AATCCACTCCACAACCAGAAGGACACGAAGTAAAGTAAACACAACCCCAC ACCCCTGACAAGATGCCGGCGGACATAGTGACCACGGAGCAGCTGCGCTA CCAGCTCGCCTTCAGTCATGCCATGGAAAGGACGACGAGGCACTGGCAGG AGACTTTCGCGTGGTACCCTAAGATGCAGTGCTGCCATTATCAGCGGATT GACCAGATCTATCTGACGAGTCGCCAGCGGTACGGCGACGGCCACTTCCT CAAGTACGCCAACCGCAGGCGCCTGGCAAAGAAGTTCGTGGTTACCGCCC AGGAGGTTGCGGAAGGTTTGGAGGATCTGAAGATGCTGGAGCAAGACGGC ATTACGGGCCTCAAAGTTGCGGTCACCGAGAACGGGGAGTACGGCCGAAT GAAGCCCTCCAAGCTGTACATGTGCTAGGACACCCTGTGACCAGCCGGCC CGCTCTGCTCCCCAATCCTCGCCAGAACCCCTCACGATTAAACTATCATT CTCTGCTGACAATGCAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3611-RA | 765 | CG3611-RA | 1..765 | 1..765 | 3810 | 99.8 | Plus |
CG3611.b | 1126 | CG3611.b | 202..707 | 262..767 | 2500 | 99.6 | Plus |
CG3611.a | 705 | CG3611.a | 202..705 | 262..765 | 2490 | 99.6 | Plus |
CG3611.b | 1126 | CG3611.b | 1..208 | 1..208 | 1040 | 100 | Plus |
CG3611.a | 705 | CG3611.a | 1..208 | 1..208 | 1040 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20684738..20685502 | 1..765 | 3810 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24798798..24799564 | 1..767 | 3820 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24799997..24800763 | 1..767 | 3820 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20684738..20685502 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..366 | 313..678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..366 | 313..678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..366 | 313..678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..366 | 313..678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..366 | 313..678 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..765 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..765 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..765 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..765 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3611-RA | 1..765 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24798798..24799562 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24798798..24799562 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24798798..24799562 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20686321..20687085 | 1..765 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24800015..24800779 | 1..765 | 99 | Plus |
Translation from 312 to 677
> AT12780.pep MPADIVTTEQLRYQLAFSHAMERTTRHWQETFAWYPKMQCCHYQRIDQIY LTSRQRYGDGHFLKYANRRRLAKKFVVTAQEVAEGLEDLKMLEQDGITGL KVAVTENGEYGRMKPSKLYMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11537-PA | 123 | GF11537-PA | 1..123 | 1..121 | 375 | 58.5 | Plus |
Dana\GF14787-PA | 130 | GF14787-PA | 6..123 | 4..121 | 175 | 31.4 | Plus |
Dana\GF14786-PA | 124 | GF14786-PA | 6..123 | 4..121 | 167 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23008-PA | 121 | GG23008-PA | 1..121 | 1..121 | 594 | 90.1 | Plus |
Dere\GG21075-PA | 124 | GG21075-PA | 5..123 | 3..121 | 158 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20361-PA | 119 | GH20361-PA | 1..119 | 1..121 | 235 | 39.2 | Plus |
Dgri\GH20359-PA | 67 | GH20359-PA | 1..65 | 1..65 | 133 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3611-PB | 121 | CG3611-PB | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PC | 121 | CG3611-PC | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PA | 121 | CG3611-PA | 1..121 | 1..121 | 649 | 100 | Plus |
CG34169-PA | 124 | CG34169-PA | 5..123 | 3..121 | 171 | 31.5 | Plus |
CG34106-PB | 122 | CG34106-PB | 5..118 | 5..118 | 164 | 29.8 | Plus |
CG34106-PA | 122 | CG34106-PA | 5..118 | 5..118 | 164 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20033-PA | 121 | GI20033-PA | 1..121 | 1..121 | 238 | 38.8 | Plus |
Dmoj\GI14285-PA | 139 | GI14285-PA | 10..127 | 5..121 | 186 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16776-PA | 119 | GL16776-PA | 1..119 | 1..121 | 265 | 45.9 | Plus |
Dper\GL22399-PA | 122 | GL22399-PA | 6..121 | 5..121 | 174 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17557-PA | 119 | GA17557-PA | 1..119 | 1..121 | 262 | 45.9 | Plus |
Dpse\GA28933-PA | 122 | GA28933-PA | 6..121 | 5..121 | 174 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11902-PA | 121 | GM11902-PA | 1..121 | 1..121 | 654 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11899-PA | 121 | GD11899-PA | 1..121 | 1..121 | 654 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21276-PA | 121 | GJ21276-PA | 1..121 | 1..121 | 227 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21674-PA | 121 | GK21674-PA | 1..121 | 1..121 | 261 | 43.9 | Plus |
Dwil\GK19082-PA | 129 | GK19082-PA | 1..124 | 1..121 | 190 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14445-PA | 121 | GE14445-PA | 1..121 | 1..121 | 592 | 89.3 | Plus |
Translation from 312 to 677
> AT12780.hyp MPADIVTTEQLRYQLAFSHAMERTTRHWQETFAWYPKMQCCHYQRIDQIY LTSRQRYGDGHFLKYANRRRLAKKFVVTAQEVAEGLEDLKMLEQDGITGL KVAVTENGEYGRMKPSKLYMC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3611-PB | 121 | CG3611-PB | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PC | 121 | CG3611-PC | 1..121 | 1..121 | 649 | 100 | Plus |
CG3611-PA | 121 | CG3611-PA | 1..121 | 1..121 | 649 | 100 | Plus |
CG34169-PA | 124 | CG34169-PA | 5..123 | 3..121 | 171 | 31.5 | Plus |
CG34106-PB | 122 | CG34106-PB | 5..118 | 5..118 | 164 | 29.8 | Plus |