BDGP Sequence Production Resources |
Search the DGRC for AT12815
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 128 |
Well: | 15 |
Vector: | pOTB7 |
Associated Gene/Transcript | RacGAP84C-RA |
Protein status: | AT12815.pep: gold |
Preliminary Size: | 1275 |
Sequenced Size: | 1447 |
Gene | Date | Evidence |
---|---|---|
CG2595 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2595 | 2002-01-11 | Blastp of sequenced clone |
CG2595 | 2003-01-01 | Sim4 clustering to Release 3 |
RacGAP84C | 2008-04-29 | Release 5.5 accounting |
RacGAP84C | 2008-08-15 | Release 5.9 accounting |
RacGAP84C | 2008-12-18 | 5.12 accounting |
CG2595 | 2011-03-01 | Transcript Validation |
1447 bp (1447 high quality bases) assembled on 2002-01-11
GenBank Submission: AY075179
> AT12815.complete ATAAACCGTAAGAGTAAATAAACATTTCGGTCGAGTATTCGGGGAAGCGA GCCGATAACTTCTGCGTAGCTGACTCAAGCCGAAGTGGCCTCTCTTCGGA AATTGCCAACTGACCAGAACAGCTGAATCAATTCGCCAACTTTATGATTA GTGGCTCTGGGAGTCGGACGCCCTCAAATCGACTTTATTTGTCGCCCGTT CGCCCCACGATGCAGAACAAACGGAGGCTTCTGCGGGAGTACAGGTCCTA CGATGACCTCAGCGAGCACTACCGCATGTTTGGATCGCAGTCCCTGGACT CGCTGCAGGATCGCGTGGACATGAATCCCAGTGGCTGCGATGGCTTATCC ACGGACGGACTCGACTTCTGCTCGCAGTCCCACTCGGGGCTGCTGAGGGA GCACAATTTCAAGATTAAGTCCTACTACTACAACGTGGGGAACTGCGTAC ACTGCCGCAAAAGGATCCGCTTCGCCATGGCCAGCCTGAGGTGTCGGGCG TGTCCGCTCCGCTGCCACATCGGTTGCTGCCGCCAGCTGACGGTGAACTG CATCCCCCAGCCTCAAATCGGTACGAAGAGAGGATGTCTCAGCGATTATG CGCCTCGGGTGGCGCCCATGGTGCCGGCCTTAATTGTCCATTGTGTAACG GAGATCGAGGCGCGGGGATTGCAGCAGGAGGGACTCTACCGGGTGTCCTC CACCCGAGAGAAATGCAAACGACTGCGTCGGAAGCTGCTGCGTGGCAAGT CCACGCCGCATTTGGGCAATAAAGACACCCACACACTGTGCTGTTGTGTT AAGGACTTTCTTCGGCAGTTGGTTCACCCTCTGATTCCCATTTACCACCG AAGGGATTTCGAGGAGGCCACGCGGCACGAAGATCGTCTGGCTGTGGAGA TGGCGGTATATTTAGCGGTTCTGGAGCTGCATCAGGCTCACAGGGATACG TTGGCCTACTTAATGCTTCACTGGCAGAAAATTGCCGAAAGTCCTGCTGT CCGCATGACGGTCAACAATCTTGCCGTGATCTTCGCTCCAACTCTGTTCG GAGATCTGGATCTAACCCTCGAAAATGTCGTCACTTGGCAGCGGGTGCTG AAGGTGCTACTTCTGATGCCTGCCGGATTTTGGTCTCAGTTCTTGGAGGT CCATCCCCTTCCCACTTCGTTGGGCAGCACCTATGACTTTGAGGACCGGT ACAATCACCGTCACTGGGACAGCTCGTCCAATCTGGGATGGTCTTCTGTT AAGACCTACTTTAGATCAATGGTCAACCTTAGCAGTACTCACCTATAGTG AAAGTCTTATGACTGAGACATCGAGAATGGATGCAGTCACCCTTTTTCAT TTTATTTTGTATTTTTTTTCATTATTCACTACAGTTGAAGAACTAATAAT AATTGGATCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RacGAP84C.a | 2179 | RacGAP84C.a | 600..2013 | 1..1414 | 7040 | 99.8 | Plus |
RacGAP84C-RA | 2014 | RacGAP84C-RA | 600..2013 | 1..1414 | 7040 | 99.8 | Plus |
RacGAP84C-RB | 1953 | RacGAP84C-RB | 600..1872 | 1..1273 | 6350 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3112662..3113473 | 462..1273 | 4060 | 100 | Plus |
chr3R | 27901430 | chr3R | 3112065..3112528 | 1..464 | 2305 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 3113591..3113732 | 1271..1412 | 695 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7286559..7287370 | 462..1273 | 4060 | 100 | Plus |
3R | 32079331 | 3R | 7285962..7286425 | 1..464 | 2305 | 99.8 | Plus |
3R | 32079331 | 3R | 7287488..7287631 | 1271..1414 | 705 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7027390..7028201 | 462..1273 | 4060 | 100 | Plus |
3R | 31820162 | 3R | 7026793..7027256 | 1..464 | 2305 | 99.7 | Plus |
3R | 31820162 | 3R | 7028319..7028462 | 1271..1414 | 705 | 99.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3112065..3112527 | 1..463 | 99 | -> | Plus |
chr3R | 3112664..3113471 | 464..1271 | 100 | -> | Plus |
chr3R | 3113592..3113732 | 1272..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1155 | 144..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1155 | 144..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1155 | 144..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1155 | 144..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1155 | 144..1298 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 600..2011 | 1..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 600..2011 | 1..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1412 | 1..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 600..2011 | 1..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RacGAP84C-RA | 1..1412 | 1..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7285962..7286424 | 1..463 | 99 | -> | Plus |
3R | 7286561..7287368 | 464..1271 | 100 | -> | Plus |
3R | 7287489..7287629 | 1272..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7285962..7286424 | 1..463 | 99 | -> | Plus |
3R | 7286561..7287368 | 464..1271 | 100 | -> | Plus |
3R | 7287489..7287629 | 1272..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7285962..7286424 | 1..463 | 99 | -> | Plus |
3R | 7286561..7287368 | 464..1271 | 100 | -> | Plus |
3R | 7287489..7287629 | 1272..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3111684..3112146 | 1..463 | 99 | -> | Plus |
arm_3R | 3112283..3113090 | 464..1271 | 100 | -> | Plus |
arm_3R | 3113211..3113351 | 1272..1412 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7026793..7027255 | 1..463 | 99 | -> | Plus |
3R | 7027392..7028199 | 464..1271 | 100 | -> | Plus |
3R | 7028320..7028460 | 1272..1412 | 99 | Plus |
Translation from 143 to 1297
> AT12815.hyp MISGSGSRTPSNRLYLSPVRPTMQNKRRLLREYRSYDDLSEHYRMFGSQS LDSLQDRVDMNPSGCDGLSTDGLDFCSQSHSGLLREHNFKIKSYYYNVGN CVHCRKRIRFAMASLRCRACPLRCHIGCCRQLTVNCIPQPQIGTKRGCLS DYAPRVAPMVPALIVHCVTEIEARGLQQEGLYRVSSTREKCKRLRRKLLR GKSTPHLGNKDTHTLCCCVKDFLRQLVHPLIPIYHRRDFEEATRHEDRLA VEMAVYLAVLELHQAHRDTLAYLMLHWQKIAESPAVRMTVNNLAVIFAPT LFGDLDLTLENVVTWQRVLKVLLLMPAGFWSQFLEVHPLPTSLGSTYDFE DRYNHRHWDSSSNLGWSSVKTYFRSMVNLSSTHL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RacGAP84C-PA | 384 | CG2595-PA | 1..384 | 1..384 | 2062 | 100 | Plus |
RacGAP84C-PB | 383 | CG2595-PB | 1..377 | 1..377 | 2027 | 100 | Plus |
tum-PA | 625 | CG13345-PA | 312..581 | 80..341 | 679 | 48.3 | Plus |
RhoGAP5A-PA | 494 | CG3208-PA | 240..463 | 85..301 | 213 | 29.1 | Plus |
RhoGAP18B-PH | 468 | CG42274-PH | 289..440 | 158..310 | 156 | 31 | Plus |
Translation from 143 to 1297
> AT12815.pep MISGSGSRTPSNRLYLSPVRPTMQNKRRLLREYRSYDDLSEHYRMFGSQS LDSLQDRVDMNPSGCDGLSTDGLDFCSQSHSGLLREHNFKIKSYYYNVGN CVHCRKRIRFAMASLRCRACPLRCHIGCCRQLTVNCIPQPQIGTKRGCLS DYAPRVAPMVPALIVHCVTEIEARGLQQEGLYRVSSTREKCKRLRRKLLR GKSTPHLGNKDTHTLCCCVKDFLRQLVHPLIPIYHRRDFEEATRHEDRLA VEMAVYLAVLELHQAHRDTLAYLMLHWQKIAESPAVRMTVNNLAVIFAPT LFGDLDLTLENVVTWQRVLKVLLLMPAGFWSQFLEVHPLPTSLGSTYDFE DRYNHRHWDSSSNLGWSSVKTYFRSMVNLSSTHL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17669-PA | 361 | GF17669-PA | 1..361 | 23..384 | 1577 | 83 | Plus |
Dana\GF11159-PA | 624 | GF11159-PA | 312..576 | 80..336 | 702 | 50 | Plus |
Dana\GF21287-PA | 506 | GF21287-PA | 254..479 | 85..303 | 204 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13997-PA | 362 | GG13997-PA | 1..362 | 23..384 | 1836 | 94.2 | Plus |
Dere\GG22464-PA | 625 | GG22464-PA | 312..581 | 80..341 | 681 | 48 | Plus |
Dere\GG18490-PA | 492 | GG18490-PA | 238..463 | 85..303 | 209 | 28.4 | Plus |
Dere\GG16384-PA | 200 | GG16384-PA | 1..157 | 159..302 | 166 | 31 | Plus |
Dere\GG18077-PA | 238 | GG18077-PA | 59..210 | 158..310 | 152 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18301-PA | 355 | GH18301-PA | 3..354 | 31..380 | 1192 | 64 | Plus |
Dgri\GH20864-PA | 621 | GH20864-PA | 312..577 | 83..340 | 689 | 49.4 | Plus |
Dgri\GH24923-PA | 502 | GH24923-PA | 249..473 | 85..303 | 209 | 28.5 | Plus |
Dgri\GH24224-PA | 358 | GH24224-PA | 119..330 | 105..310 | 170 | 29.4 | Plus |
Dgri\GH23982-PA | 265 | GH23982-PA | 4..161 | 160..304 | 160 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RacGAP84C-PA | 384 | CG2595-PA | 1..384 | 1..384 | 2062 | 100 | Plus |
RacGAP84C-PB | 383 | CG2595-PB | 1..377 | 1..377 | 2027 | 100 | Plus |
tum-PA | 625 | CG13345-PA | 312..581 | 80..341 | 679 | 48.3 | Plus |
RhoGAP5A-PA | 494 | CG3208-PA | 240..463 | 85..301 | 213 | 29.1 | Plus |
RhoGAP18B-PH | 468 | CG42274-PH | 289..440 | 158..310 | 156 | 31 | Plus |
RhoGAP18B-PF | 468 | CG42274-PF | 289..440 | 158..310 | 156 | 31 | Plus |
RhoGAP18B-PB | 468 | CG7481-PA | 289..440 | 158..310 | 156 | 31 | Plus |
RhoGAP18B-PD | 752 | CG42274-PD | 573..724 | 158..310 | 156 | 31 | Plus |
RhoGAP18B-PC | 1317 | CG42274-PC | 1138..1289 | 158..310 | 156 | 31 | Plus |
RhoGAP102A-PC | 1074 | CG42316-PC | 873..1065 | 159..326 | 155 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24111-PA | 366 | GI24111-PA | 1..365 | 23..380 | 1236 | 65.9 | Plus |
Dmoj\GI20972-PA | 631 | GI20972-PA | 313..587 | 77..343 | 689 | 48.6 | Plus |
Dmoj\GI21776-PA | 500 | GI21776-PA | 243..467 | 85..303 | 208 | 28.1 | Plus |
Dmoj\GI14109-PA | 182 | GI14109-PA | 3..160 | 160..304 | 161 | 31.4 | Plus |
Dmoj\GI15727-PA | 1459 | GI15727-PA | 1280..1443 | 158..323 | 157 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12436-PA | 372 | GL12436-PA | 1..370 | 23..381 | 1353 | 69.9 | Plus |
Dper\GL16993-PA | 500 | GL16993-PA | 189..453 | 80..336 | 708 | 50 | Plus |
Dper\GL14655-PA | 310 | GL14655-PA | 131..282 | 158..310 | 154 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15397-PB | 375 | GA15397-PB | 1..364 | 23..384 | 1382 | 71.3 | Plus |
Dpse\GA12222-PA | 624 | GA12222-PA | 312..576 | 80..336 | 703 | 49.6 | Plus |
Dpse\GA16662-PA | 490 | GA16662-PA | 240..463 | 87..303 | 221 | 29.5 | Plus |
Dpse\GA22300-PA | 310 | GA22300-PA | 131..282 | 158..310 | 155 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10949-PA | 362 | GM10949-PA | 1..362 | 23..384 | 1920 | 98.3 | Plus |
Dsec\GM20250-PA | 625 | GM20250-PA | 312..581 | 80..341 | 680 | 47.6 | Plus |
Dsec\GM12638-PA | 494 | GM12638-PA | 240..465 | 85..303 | 210 | 28.8 | Plus |
Dsec\GM22767-PA | 238 | GM22767-PA | 59..203 | 158..303 | 166 | 33.3 | Plus |
Dsec\GM26791-PA | 198 | GM26791-PA | 1..193 | 159..326 | 164 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19928-PA | 362 | GD19928-PA | 1..362 | 23..384 | 1909 | 97.8 | Plus |
Dsim\GD25736-PA | 625 | GD25736-PA | 312..581 | 80..341 | 685 | 48 | Plus |
Dsim\GD16254-PA | 495 | GD16254-PA | 240..466 | 85..303 | 206 | 28.7 | Plus |
Dsim\GD15602-PA | 532 | GD15602-PA | 357..504 | 158..310 | 158 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10933-PA | 360 | GJ10933-PA | 1..359 | 23..380 | 1258 | 66.6 | Plus |
Dvir\GJ20692-PA | 626 | GJ20692-PA | 308..579 | 77..340 | 685 | 49.3 | Plus |
Dvir\GJ16949-PA | 508 | GJ16949-PA | 253..477 | 85..303 | 206 | 28.1 | Plus |
Dvir\GJ17092-PA | 183 | GJ17092-PA | 4..161 | 160..304 | 164 | 32.1 | Plus |
Dvir\GJ15255-PA | 1365 | GJ15255-PA | 1186..1337 | 158..310 | 162 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12006-PA | 353 | GK12006-PA | 1..353 | 29..383 | 1371 | 73.8 | Plus |
Dwil\GK21345-PA | 607 | GK21345-PA | 299..582 | 77..355 | 678 | 46.5 | Plus |
Dwil\GK24959-PA | 512 | GK24959-PA | 262..485 | 87..303 | 219 | 29.1 | Plus |
Dwil\GK13678-PA | 206 | GK13678-PA | 27..182 | 160..302 | 169 | 31.8 | Plus |
Dwil\GK25096-PA | 184 | GK25096-PA | 5..148 | 158..302 | 158 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11172-PA | 362 | GE11172-PA | 1..362 | 23..384 | 1819 | 93.4 | Plus |
Dyak\GE24919-PA | 145 | GE24919-PA | 1..136 | 23..158 | 691 | 94.9 | Plus |
Dyak\GE13335-PA | 625 | GE13335-PA | 312..578 | 80..338 | 684 | 48.1 | Plus |
Dyak\GE16808-PA | 495 | GE16808-PA | 241..466 | 85..303 | 211 | 28.8 | Plus |
Dyak\GE14545-PA | 196 | GE14545-PA | 1..164 | 159..309 | 168 | 30.3 | Plus |