BDGP Sequence Production Resources |
Search the DGRC for AT12868
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 128 |
Well: | 68 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG31819-RA |
Protein status: | AT12868.pep: gold |
Sequenced Size: | 1711 |
Gene | Date | Evidence |
---|---|---|
CG12455 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31819 | 2002-01-11 | Blastp of sequenced clone |
CG31819 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31819 | 2008-04-29 | Release 5.5 accounting |
CG31819 | 2008-08-15 | Release 5.9 accounting |
CG31819 | 2008-12-18 | 5.12 accounting |
1711 bp (1711 high quality bases) assembled on 2002-01-11
GenBank Submission: AY075181
> AT12868.complete GAGACTTTGACCTAATACTCAACTAAATTTCGATTGATAGAAACTAGTAC ACTATAGGCAAATTAAAAAGGACTTTAATTTTCTATTATCCTTTTTTATA CTTATAGCGTATAGGTTTAGGTCTCCGGTATGTTGAGCCGTAGTCCTAGA CTATTGAAGAATCCAGAGAGGAAACAGCGTCTGCCAAAATTCCAAGTTGG AAACGGATCGGTGATCGAGATGGAAGCTCCTCGAAATAACCGTCGAATCC ATCAGGTCGCCCAAATTGGAGACGGTTTGACTACCCCTTTGGAAAGTCCA TCGAACAACTATTCATCTGATAGATCCCTTCCCCAAACGAAACTTGAGGA GGGAGAACAGGATGTAGACTACTGGGAGTTAAAGAAGGTTTTTCAAAAAC TTGACCTCTCCGACCAGATCGTCCTCTACCGCTCCTTTCGTCTCCTTCCC GCCGCCTGCTACACCCTTTGGCGAAGTACAAGGAAACGGCTCGACTTCCG CACTCTTCATAAGGATCTTGGCGAGGAATCCCAGAGACATCTTATCGTTC ACATGAAGGATCATTTTAAGTACGTTTACTTCGTCGCAGATAGACTGCAG GAAAACCTTAATGTTTTGGAAAAAGCAGGAGTCAAGTCGATAGTATCTGT TCAACGCTGCGAACTGCTGATGGAAGAAAAGGTTAAGTCTAGCAGTCAAC AATCTGGAGAAGATTTTGGTGGAAATAGAATGGCTCAGTGGCCACTGCAT GCTCTTCCCAAATTGATGAGAAATTTGCGCCGTCTGACGGCCGATTGTGA AATCCAGGTGCACTTCATCGAACATTTTAAGGAACTGGAGTTACTAGTGC TCAATGGATTCATTTCGCAGACTGCTCTCACTGGGATCTTAGAGCGGTGC CACAAATTGACCAGATTATTTCTTCGATTCGATTGCGATACACTGAGCTT GAAGCTCATTGATAAGTGTTCCAATCTGAGAGACCTATCGTTGACCACAG GACTGTTTTTTCACCAAAAGGACCTTGTCATGAAACTGACTGATCTTCGA CTGTTGGAGTTAACACAATGTGAAACGAGAAGTCAGCTGACACTTGAGTG CATGCAATTTATACTGAATAGACGGAAAGATTCTGTGCAACTGATTCAAA TAGATTGCAAAGGCTTTCAGGATCCCAATTGGATGAAGGAGGTCGGGTTG GATCGGTGCTCTCGATTGCGGGGATTGGTCCTGGCAAACTGCTACTTCTG CGACCGCGAGATTAGCCGGCTCTTGTTTCCAAGAGTTCAGAAATACATTG CTCTAATTAATTGCCCTGATATTAAGGACTACCAGTTGATAGATATGGTG CGAATGTGTCCCGGTCTCAACGATATCTACTTGCTGGACTGTCCCCAGTT GAGCTGGAAGGTCCTTCAAGGTATTTACCGAATCCGGAGGAGTGAAAATC TTAGCTATCCCATTACCATTATCCTCAGTCAACACTCTGAACTCAGGGAT GCCTATCAGTCCATGTACTCAAACTTCTGGTGCTTCAAGCTCCCTTTCCT CAGAATGGAACGCGTAATTCATCAATGTCGACCGATTAGAGATATTCAAT TTTTTTTCAATAGCAGCGAATAGTACTGTAGAGTTATAGTATCCATAGCT GTTTTACAAATATTCTAAATAAATATATATATTTTTCTCCAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31819-RA | 1693 | CG31819-RA | 1..1693 | 1..1693 | 8465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16210958..16211874 | 599..1515 | 4585 | 100 | Plus |
chr2L | 23010047 | chr2L | 16210301..16210901 | 1..601 | 3005 | 100 | Plus |
chr2L | 23010047 | chr2L | 16211971..16212146 | 1515..1690 | 865 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16212116..16213032 | 599..1515 | 4585 | 100 | Plus |
2L | 23513712 | 2L | 16211459..16212059 | 1..601 | 3005 | 100 | Plus |
2L | 23513712 | 2L | 16213129..16213307 | 1515..1693 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16212116..16213032 | 599..1515 | 4585 | 100 | Plus |
2L | 23513712 | 2L | 16211459..16212059 | 1..601 | 3005 | 100 | Plus |
2L | 23513712 | 2L | 16213129..16213307 | 1515..1693 | 895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16210301..16210900 | 1..600 | 100 | -> | Plus |
chr2L | 16210960..16211874 | 601..1515 | 100 | -> | Plus |
chr2L | 16211972..16212113 | 1516..1657 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1494 | 130..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1494 | 130..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1494 | 130..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1494 | 130..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1494 | 130..1623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1690 | 1..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1690 | 1..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1690 | 1..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1690 | 1..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31819-RA | 1..1690 | 1..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16211459..16212058 | 1..600 | 100 | -> | Plus |
2L | 16212118..16213032 | 601..1515 | 100 | -> | Plus |
2L | 16213130..16213304 | 1516..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16211459..16212058 | 1..600 | 100 | -> | Plus |
2L | 16212118..16213032 | 601..1515 | 100 | -> | Plus |
2L | 16213130..16213304 | 1516..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16211459..16212058 | 1..600 | 100 | -> | Plus |
2L | 16212118..16213032 | 601..1515 | 100 | -> | Plus |
2L | 16213130..16213304 | 1516..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16211459..16212058 | 1..600 | 100 | -> | Plus |
arm_2L | 16212118..16213032 | 601..1515 | 100 | -> | Plus |
arm_2L | 16213130..16213304 | 1516..1690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16211459..16212058 | 1..600 | 100 | -> | Plus |
2L | 16212118..16213032 | 601..1515 | 100 | -> | Plus |
2L | 16213130..16213304 | 1516..1690 | 100 | Plus |
Translation from 129 to 1622
> AT12868.pep MLSRSPRLLKNPERKQRLPKFQVGNGSVIEMEAPRNNRRIHQVAQIGDGL TTPLESPSNNYSSDRSLPQTKLEEGEQDVDYWELKKVFQKLDLSDQIVLY RSFRLLPAACYTLWRSTRKRLDFRTLHKDLGEESQRHLIVHMKDHFKYVY FVADRLQENLNVLEKAGVKSIVSVQRCELLMEEKVKSSSQQSGEDFGGNR MAQWPLHALPKLMRNLRRLTADCEIQVHFIEHFKELELLVLNGFISQTAL TGILERCHKLTRLFLRFDCDTLSLKLIDKCSNLRDLSLTTGLFFHQKDLV MKLTDLRLLELTQCETRSQLTLECMQFILNRRKDSVQLIQIDCKGFQDPN WMKEVGLDRCSRLRGLVLANCYFCDREISRLLFPRVQKYIALINCPDIKD YQLIDMVRMCPGLNDIYLLDCPQLSWKVLQGIYRIRRSENLSYPITIILS QHSELRDAYQSMYSNFWCFKLPFLRMERVIHQCRPIRDIQFFFNSSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22607-PA | 550 | GF22607-PA | 93..529 | 76..493 | 1278 | 56.8 | Plus |
Dana\GF16757-PA | 437 | GF16757-PA | 35..431 | 87..494 | 466 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25193-PA | 500 | GG25193-PA | 1..500 | 1..497 | 2045 | 77.4 | Plus |
Dere\GG22648-PA | 434 | GG22648-PA | 1..429 | 54..497 | 432 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12725-PA | 429 | GH12725-PA | 25..412 | 90..468 | 847 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31819-PA | 497 | CG31819-PA | 1..497 | 1..497 | 2608 | 100 | Plus |
CG14316-PA | 430 | CG14316-PA | 1..411 | 54..477 | 420 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15974-PA | 1073 | GI15974-PA | 631..1069 | 76..496 | 1094 | 46.5 | Plus |
Dmoj\GI23714-PA | 430 | GI23714-PA | 33..389 | 87..455 | 475 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12943-PA | 401 | GL12943-PA | 52..376 | 166..495 | 593 | 35.5 | Plus |
Dper\GL12589-PA | 435 | GL12589-PA | 27..428 | 83..495 | 515 | 28.8 | Plus |
Dper\GL14078-PA | 294 | GL14078-PA | 1..127 | 113..235 | 197 | 36.2 | Plus |
Dper\GL25470-PA | 146 | GL25470-PA | 27..130 | 83..186 | 169 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22907-PA | 490 | GA22907-PA | 72..463 | 108..493 | 696 | 36.4 | Plus |
Dpse\GA27566-PA | 435 | GA27566-PA | 11..428 | 67..495 | 518 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18656-PA | 496 | GM18656-PA | 1..496 | 1..497 | 2405 | 90.7 | Plus |
Dsec\GM15278-PA | 434 | GM15278-PA | 1..413 | 54..479 | 427 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24042-PA | 185 | GD24042-PA | 1..184 | 1..184 | 879 | 90.2 | Plus |
Dsim\GD19201-PA | 408 | GD19201-PA | 1..395 | 54..460 | 411 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18872-PA | 468 | GJ18872-PA | 24..464 | 74..496 | 1141 | 48.8 | Plus |
Dvir\GJ23273-PA | 431 | GJ23273-PA | 33..378 | 87..444 | 492 | 31.9 | Plus |
Translation from 129 to 1622
> AT12868.hyp MLSRSPRLLKNPERKQRLPKFQVGNGSVIEMEAPRNNRRIHQVAQIGDGL TTPLESPSNNYSSDRSLPQTKLEEGEQDVDYWELKKVFQKLDLSDQIVLY RSFRLLPAACYTLWRSTRKRLDFRTLHKDLGEESQRHLIVHMKDHFKYVY FVADRLQENLNVLEKAGVKSIVSVQRCELLMEEKVKSSSQQSGEDFGGNR MAQWPLHALPKLMRNLRRLTADCEIQVHFIEHFKELELLVLNGFISQTAL TGILERCHKLTRLFLRFDCDTLSLKLIDKCSNLRDLSLTTGLFFHQKDLV MKLTDLRLLELTQCETRSQLTLECMQFILNRRKDSVQLIQIDCKGFQDPN WMKEVGLDRCSRLRGLVLANCYFCDREISRLLFPRVQKYIALINCPDIKD YQLIDMVRMCPGLNDIYLLDCPQLSWKVLQGIYRIRRSENLSYPITIILS QHSELRDAYQSMYSNFWCFKLPFLRMERVIHQCRPIRDIQFFFNSSE*