BDGP Sequence Production Resources |
Search the DGRC for AT12891
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 128 |
Well: | 91 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG14658-RA |
Protein status: | AT12891.pep: gold |
Preliminary Size: | 7689 |
Sequenced Size: | 1226 |
Gene | Date | Evidence |
---|---|---|
CG14658 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14658 | 2008-04-29 | Release 5.5 accounting |
gpp | 2008-08-15 | Release 5.9 accounting |
CG14658 | 2008-08-15 | Release 5.9 accounting |
gpp | 2008-12-18 | 5.12 accounting |
CG14658 | 2008-12-18 | 5.12 accounting |
1226 bp (1226 high quality bases) assembled on 2004-05-03
GenBank Submission: BT014671
> AT12891.complete TAAACGTGTCCTCCTTGCTGACAGTGACGTGCTTAAGCATCTGCTGCACC AGCTCATAGCTCGTCTCGCCGTAAACCTCTGGCGAGAAGGGCTCGTACTG GTTGAGTTTATCCGGATCGAGTACGGCGGCATTGTAAACTAATTGCAATA TGTGTCTTAGAAGGCTAGGGTGAGCGAACTTGTTCAGGCGCTCGGCGGGC AGTGAAGTTCCTTTTTCCAATGCAACGATACTGTCGACGGCCTTGTTGAA GCGATCGACCAGACCGGTCATAGTCTTATAGCAGGCAGTGTCAATTTGGT GGAGATTGGTTTCCTCGAAGGCCGATGACATCGATGGCAGTTCATCGCAG ACGAACTTAATGGTGTCGATGATGTCGATGCCATTGTCGTGCTTATCCTG TCCGTGTCCGATCTGCAGGGGCCAGGCGAAGGAAATGACATCGGAGGAGC CAGCGGGCGAGCGCAACACCAAGTCCTTGACTTGGGGTGTGGCCATATTT TTCCGCTTTCCTTAGCCTTAGCCAGCCTTTTTTTTTATTATTTTTGTCTA TTTTGTTGTGTTTTTGGTGTGCGTGACAAAGGGGCGCCTCGTGCCGAATT CGGCACGAGGCAAGCATATAATTCCACTCAATAATGATTTCAAAGATCAA GATCTGGAGCCGCTCGCCACTGATTCCGGCTAGGGATCACGGTTCAGCGA TCCTTCCGCCGGCAGATCGGCCAGATCCCATTCCGGAGCTGTGCGAGGAA AGGCCGGTGATGGGTTGGCTGCTCGGCTGGGAGTACGGGAGGAAGTGGCT GGAGAGGCGCGAGGAGATCCAGAGGCACCGCAACATGGTCAGCAAGTTCG GCAGGATCCCGGCGGACTTCAGCTGGTGGCTCAACCAGCGCAGGCCCCTC TATGTGCGCCAACAGCGATTCCGGAGCAAGGCCGGACCTCGTGCCCGGAA ACAGATAACGGCCTTCGAGATGGCCAAGCGGAGGCGTGAGGAGCAGAACC GCAAGCTATTGGAGAGCCAGCCCAAAAACCAGTAAAACACACACTCAAAA TGTCCAACATGCCAATCGAAGGGTAAACTCTGTCAAAATTGCTAAGCCAA ACAACTGTATATGTACGAGTACAACATTGCAATCGTTGTACAAAGAACTC CCTATGATGATGCGCCAATAAACACGGTTAGAATGCTTAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 655607..656184 | 1188..611 | 2875 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 2263288..2263657 | 586..217 | 1850 | 100 | Minus |
chr3R | 27901430 | chr3R | 2263901..2264118 | 218..1 | 1090 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4829909..4830488 | 1190..611 | 2885 | 99.8 | Minus |
3R | 32079331 | 3R | 6437566..6437935 | 586..217 | 1850 | 100 | Minus |
3R | 32079331 | 3R | 6438179..6438396 | 218..1 | 1090 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4570740..4571319 | 1190..611 | 2885 | 99.8 | Minus |
3R | 31820162 | 3R | 6178397..6178766 | 586..217 | 1850 | 100 | Minus |
3R | 31820162 | 3R | 6179010..6179227 | 218..1 | 1090 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 655607..656184 | 611..1188 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14658-RA | 1..402 | 634..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14658-RA | 1..402 | 634..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14658-RA | 1..402 | 634..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14658-RA | 1..402 | 634..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14658-RA | 1..402 | 634..1035 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gpp-RB | 1733..2326 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gpp-RD | 1366..1959 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gpp-RB | 1366..1959 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gpp-RB | 1733..2326 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gpp-RB | 1366..1959 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4829911..4830488 | 611..1188 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4829911..4830488 | 611..1188 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4829911..4830488 | 611..1188 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 655633..656210 | 611..1188 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4570742..4571319 | 611..1188 | 99 | == | Minus |
Translation from 633 to 1034
> AT12891.pep MISKIKIWSRSPLIPARDHGSAILPPADRPDPIPELCEERPVMGWLLGWE YGRKWLERREEIQRHRNMVSKFGRIPADFSWWLNQRRPLYVRQQRFRSKA GPRARKQITAFEMAKRRREEQNRKLLESQPKNQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16083-PA | 169 | GF16083-PA | 1..106 | 2..107 | 329 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11311-PA | 133 | GG11311-PA | 1..133 | 1..133 | 635 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14658-PA | 133 | CG14658-PA | 1..133 | 1..133 | 719 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14692-PA | 170 | GI14692-PA | 12..133 | 5..130 | 152 | 31.8 | Plus |
Dmoj\GI11504-PA | 198 | GI11504-PA | 3..121 | 6..118 | 150 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22216-PA | 139 | GL22216-PA | 6..135 | 7..133 | 343 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13153-PA | 139 | GA13153-PA | 1..129 | 2..127 | 349 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10674-PA | 133 | GM10674-PA | 1..133 | 1..133 | 668 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19649-PA | 133 | GD19649-PA | 1..133 | 1..133 | 668 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16600-PA | 164 | GJ16600-PA | 6..135 | 8..131 | 160 | 36.8 | Plus |
Dvir\GJ17142-PA | 201 | GJ17142-PA | 25..125 | 25..122 | 139 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18969-PA | 126 | GK18969-PA | 6..124 | 6..121 | 134 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25325-PA | 133 | GE25325-PA | 1..133 | 1..133 | 650 | 94.7 | Plus |
Translation from 633 to 1034
> AT12891.hyp MISKIKIWSRSPLIPARDHGSAILPPADRPDPIPELCEERPVMGWLLGWE YGRKWLERREEIQRHRNMVSKFGRIPADFSWWLNQRRPLYVRQQRFRSKA GPRARKQITAFEMAKRRREEQNRKLLESQPKNQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14658-PA | 133 | CG14658-PA | 1..133 | 1..133 | 719 | 100 | Plus |