BDGP Sequence Production Resources |
Search the DGRC for AT13028
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 130 |
Well: | 28 |
Vector: | pOTB7 |
Associated Gene/Transcript | dgt2-RA |
Protein status: | AT13028.pep: gold |
Preliminary Size: | 696 |
Sequenced Size: | 832 |
Gene | Date | Evidence |
---|---|---|
CG16969 | 2002-01-01 | Sim4 clustering to Release 2 |
CG16969 | 2002-06-10 | Blastp of sequenced clone |
CG16969 | 2003-01-01 | Sim4 clustering to Release 3 |
dgt2 | 2008-04-29 | Release 5.5 accounting |
dgt2 | 2008-08-15 | Release 5.9 accounting |
dgt2 | 2008-12-18 | 5.12 accounting |
832 bp (832 high quality bases) assembled on 2002-06-10
GenBank Submission: AY070785
> AT13028.complete CGCTTGCCCATTCGAATCAAACAATCAATTTCGGGTCAATTTAAGCATTT TACCACCTAAATGGATGATCCATCCGCCACGCTCTTGCCCGAACACTCGG AAGATTTGCGGCTGGCTCGCGATGCGGAGCTGAAGAAGGTGCTCAAGCTG AAGCTAGTGCTGGACGAGCTAAGACGCCTGGATGTGGGCCCAAATCCGAG TGATGAAATCAAAAGAGCCCTCAAATTGGTTTCCATTGGAAGTTATGCGC GACTCGGCGAGATGGAGGGAGCTGGTCAGGAGCAGGTGCTTGGTCTACCG AGCGGCAGCAGTTTTCCGCCCTTGAATTACACGGATCGCAAGACGGTGCG TACCAAATTGTCCGCTCAATTACGCACAACTCTGCAACCCATTGCCGAAT TGTGCGACAGGATACGCGAGGAGTTCCCGGACGCCTTTGGCCAGGAGGCG GACTTAAGCTGCGACCAAAAGGAGATTCTGCGCCTGGAGGAGGAGCATCG CAGCGGTCTGGAGAAATTGGTTGCGCTTCTCACTCGTAAGTGCACGCTTC TCAAGGAGACCGCCGAATTGAAATTGGGGCCGCAGTTGGCAAACGAACTA AAATTGCAACAGGCGCAGGCGCAACTTGTTCAAACAAAAGCAGAACTACT GCGCGGATTTTTCGTCCACGAGGCCGCCTCTCGCACCGAACATAGCGTCA AGGCACATAAGGAGGTGGAGGCGCACCTGGACGAGCTGCTCGCCGCCAAG AAGTAGATTTAAGCAAACTAGTATTATGTAAATTAGATTTTTAAATACAT TATAATTGTGATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt2-RA | 872 | dgt2-RA | 45..861 | 1..817 | 4085 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11988617..11988908 | 1..292 | 100 | -> | Plus |
chr2L | 11988966..11989487 | 293..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..696 | 61..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..696 | 61..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..696 | 61..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..696 | 61..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..696 | 61..756 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..814 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 27..840 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 29..842 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 1..814 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt2-RA | 29..842 | 1..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11989964..11990255 | 1..292 | 100 | -> | Plus |
2L | 11990313..11990834 | 293..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11989964..11990255 | 1..292 | 100 | -> | Plus |
2L | 11990313..11990834 | 293..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11989964..11990255 | 1..292 | 100 | -> | Plus |
2L | 11990313..11990834 | 293..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11989964..11990255 | 1..292 | 100 | -> | Plus |
arm_2L | 11990313..11990834 | 293..814 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11989964..11990255 | 1..292 | 100 | -> | Plus |
2L | 11990313..11990834 | 293..814 | 100 | Plus |
Translation from 60 to 755
> AT13028.pep MDDPSATLLPEHSEDLRLARDAELKKVLKLKLVLDELRRLDVGPNPSDEI KRALKLVSIGSYARLGEMEGAGQEQVLGLPSGSSFPPLNYTDRKTVRTKL SAQLRTTLQPIAELCDRIREEFPDAFGQEADLSCDQKEILRLEEEHRSGL EKLVALLTRKCTLLKETAELKLGPQLANELKLQQAQAQLVQTKAELLRGF FVHEAASRTEHSVKAHKEVEAHLDELLAAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15136-PA | 236 | GF15136-PA | 5..231 | 3..231 | 790 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23751-PA | 231 | GG23751-PA | 1..231 | 1..231 | 953 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13062-PA | 230 | GH13062-PA | 1..227 | 1..230 | 559 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt2-PB | 231 | CG16969-PB | 1..231 | 1..231 | 1149 | 100 | Plus |
dgt2-PA | 231 | CG16969-PA | 1..231 | 1..231 | 1149 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17682-PA | 235 | GI17682-PA | 3..231 | 1..231 | 490 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18538-PA | 231 | GL18538-PA | 3..223 | 5..231 | 550 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14243-PA | 231 | GA14243-PA | 3..223 | 5..231 | 549 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26683-PA | 217 | GM26683-PA | 1..217 | 1..231 | 903 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23803-PA | 231 | GD23803-PA | 1..231 | 1..231 | 1136 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17467-PA | 243 | GJ17467-PA | 1..229 | 1..231 | 543 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15173-PA | 227 | GK15173-PA | 1..224 | 1..231 | 579 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18558-PA | 231 | GE18558-PA | 1..231 | 1..231 | 918 | 88.7 | Plus |
Translation from 60 to 755
> AT13028.hyp MDDPSATLLPEHSEDLRLARDAELKKVLKLKLVLDELRRLDVGPNPSDEI KRALKLVSIGSYARLGEMEGAGQEQVLGLPSGSSFPPLNYTDRKTVRTKL SAQLRTTLQPIAELCDRIREEFPDAFGQEADLSCDQKEILRLEEEHRSGL EKLVALLTRKCTLLKETAELKLGPQLANELKLQQAQAQLVQTKAELLRGF FVHEAASRTEHSVKAHKEVEAHLDELLAAKK*