BDGP Sequence Production Resources |
Search the DGRC for AT13217
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 132 |
Well: | 17 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG5050-RA |
Protein status: | AT13217.pep: gold |
Sequenced Size: | 1115 |
Gene | Date | Evidence |
---|---|---|
CG5050-RA | 2011-07-29 | Manual selection by Sue Celniker |
1115 bp assembled on 2011-10-17
GenBank Submission: BT132696.1
> AT13217.complete ATTTGGTATAGCAAACGCAAACGCTATACAAGAAAATTTAAGTTTTTTTT TTAACACTTTAATACACGGCTGAATTAATGGATAGACAAGGTGTTCATAA TAGCTATGGGTCAATAGCGAAAGACGCAATAGATGAGCAACGGATGGTGC TATCGATGCCACAACTGTCCATCCAGAGGAAATCCGTTACAAGCATGAAG TTATTCACCATGGTGGTGTTGCACTCGTGGCGCCAACGCCGAAAGGAGGT TCGTGAACTCAAAGAGATGGTGCAACACCTCCAGGATAGCTCCATGAAGA CCAAAAACGAACTGCACGTATGTGGCACATTGATGCGTGTGGAGGAAAAA CGAAACAGGGAACTTCAAATAAAGCTTAAGCTATCGACGATGAGCATTGA CCAAGTAAGGTCCTCCTGTGAATCTCTTGTCAACTCGGTCCGTGACCTCA CAACAGAGAAAAGGCGATTGGAAACCGATTTGGAACAGCGCTTGCAGGAG TACAATGAGCTGGAGGAAGTATCTGACAAAACCAAACGGCTGCTCTTCAG CGCCTACGTGGAACAATCTAGCCTGCAAAAGCAACTAGCTGAGGAGCAGC GTACGACGCAGAGATTGCAGGCGGAAAAGGACCAGCTAATCCAGGAAGTG ATACTGGCGGAGGGCAGAGATAACAAGTACCGCCAGGTGCGGGAATGGTA CCAGCGTGTACTGCACAAAAAGGAGGTGTGCATTTACAACCTGGGAAGGA GATTGCATATGCTGGAGGAGCAACTGTTTGACATTAATGAGCACACTGGA GAATTGGAACAATTGCGTGAGAGTGCTCAACAAATGTCGAACGAAATCAC AGAGTTGCGCCAGGAGATCAACCGAAATCGCAACGGTGTCTTCGGTGATT CCTGCTGTCGCCTCGGACTCGGACGCCTCCACGACCATGTGATTGCGCCC TTTCAAGGCAACCATATCTGGATAAAACTTCGACGCTATTCCTTTAACGT GATATATTTGTTTGCTTTGTATCTGCTGCCTGGAATGTCTCTCAAATATC GTCAAAACTAAACCTAATTAAATAAACTTTCTATAAAAATAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 17457111..17457410 | 791..1090 | 1500 | 100 | Plus |
chr2L | 23010047 | chr2L | 17452522..17452814 | 499..791 | 1465 | 100 | Plus |
chr2L | 23010047 | chr2L | 17451788..17452077 | 1..290 | 1405 | 99 | Plus |
chr2L | 23010047 | chr2L | 17452155..17452364 | 291..500 | 1050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17458476..17458776 | 791..1091 | 1505 | 100 | Plus |
2L | 23513712 | 2L | 17453882..17454174 | 499..791 | 1465 | 100 | Plus |
2L | 23513712 | 2L | 17453148..17453437 | 1..290 | 1450 | 100 | Plus |
2L | 23513712 | 2L | 17453515..17453724 | 291..500 | 1050 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 17458476..17458776 | 791..1091 | 1505 | 100 | Plus |
2L | 23513712 | 2L | 17453882..17454174 | 499..791 | 1465 | 100 | Plus |
2L | 23513712 | 2L | 17453148..17453437 | 1..290 | 1450 | 100 | Plus |
2L | 23513712 | 2L | 17453515..17453724 | 291..500 | 1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 17451788..17452077 | 1..290 | 98 | -> | Plus |
chr2L | 17452155..17452364 | 291..500 | 100 | -> | Plus |
chr2L | 17452524..17452813 | 501..790 | 100 | -> | Plus |
chr2L | 17457111..17457410 | 791..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 1..984 | 78..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 1..984 | 78..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 1..984 | 78..1061 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 155..1244 | 1..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 225..1314 | 1..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5050-RA | 225..1314 | 1..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17453515..17453724 | 291..500 | 100 | -> | Plus |
2L | 17453884..17454173 | 501..790 | 100 | -> | Plus |
2L | 17453148..17453437 | 1..290 | 100 | -> | Plus |
2L | 17458476..17458775 | 791..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17453515..17453724 | 291..500 | 100 | -> | Plus |
2L | 17453884..17454173 | 501..790 | 100 | -> | Plus |
2L | 17453148..17453437 | 1..290 | 100 | -> | Plus |
2L | 17458476..17458775 | 791..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17453515..17453724 | 291..500 | 100 | -> | Plus |
2L | 17453884..17454173 | 501..790 | 100 | -> | Plus |
2L | 17453148..17453437 | 1..290 | 100 | -> | Plus |
2L | 17458476..17458775 | 791..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 17453148..17453437 | 1..290 | 100 | -> | Plus |
arm_2L | 17453515..17453724 | 291..500 | 100 | -> | Plus |
arm_2L | 17453884..17454173 | 501..790 | 100 | -> | Plus |
arm_2L | 17458476..17458775 | 791..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 17453148..17453437 | 1..290 | 100 | -> | Plus |
2L | 17453515..17453724 | 291..500 | 100 | -> | Plus |
2L | 17453884..17454173 | 501..790 | 100 | -> | Plus |
2L | 17458476..17458775 | 791..1090 | 100 | Plus |
Translation from 77 to 1060
> AT13217.hyp MDRQGVHNSYGSIAKDAIDEQRMVLSMPQLSIQRKSVTSMKLFTMVVLHS WRQRRKEVRELKEMVQHLQDSSMKTKNELHVCGTLMRVEEKRNRELQIKL KLSTMSIDQVRSSCESLVNSVRDLTTEKRRLETDLEQRLQEYNELEEVSD KTKRLLFSAYVEQSSLQKQLAEEQRTTQRLQAEKDQLIQEVILAEGRDNK YRQVREWYQRVLHKKEVCIYNLGRRLHMLEEQLFDINEHTGELEQLRESA QQMSNEITELRQEINRNRNGVFGDSCCRLGLGRLHDHVIAPFQGNHIWIK LRRYSFNVIYLFALYLLPGMSLKYRQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5050-PB | 327 | CG5050-PB | 1..327 | 1..327 | 1666 | 100 | Plus |
CG5050-PA | 327 | CG5050-PA | 1..327 | 1..327 | 1666 | 100 | Plus |
CG5043-PA | 499 | CG5043-PA | 198..358 | 33..193 | 236 | 31.1 | Plus |
Translation from 77 to 1060
> AT13217.pep MDRQGVHNSYGSIAKDAIDEQRMVLSMPQLSIQRKSVTSMKLFTMVVLHS WRQRRKEVRELKEMVQHLQDSSMKTKNELHVCGTLMRVEEKRNRELQIKL KLSTMSIDQVRSSCESLVNSVRDLTTEKRRLETDLEQRLQEYNELEEVSD KTKRLLFSAYVEQSSLQKQLAEEQRTTQRLQAEKDQLIQEVILAEGRDNK YRQVREWYQRVLHKKEVCIYNLGRRLHMLEEQLFDINEHTGELEQLRESA QQMSNEITELRQEINRNRNGVFGDSCCRLGLGRLHDHVIAPFQGNHIWIK LRRYSFNVIYLFALYLLPGMSLKYRQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14797-PA | 339 | GF14797-PA | 24..337 | 24..324 | 616 | 42.2 | Plus |
Dana\GF14796-PA | 518 | GF14796-PA | 212..465 | 37..319 | 195 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21089-PA | 334 | GG21089-PA | 5..331 | 1..324 | 1102 | 67 | Plus |
Dere\GG21087-PA | 504 | GG21087-PA | 202..356 | 37..191 | 192 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11704-PA | 233 | GH11704-PA | 34..185 | 35..186 | 327 | 48.7 | Plus |
Dgri\GH11703-PA | 504 | GH11703-PA | 193..334 | 37..178 | 184 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5050-PB | 327 | CG5050-PB | 1..327 | 1..327 | 1666 | 100 | Plus |
CG5050-PA | 327 | CG5050-PA | 1..327 | 1..327 | 1666 | 100 | Plus |
CG5043-PA | 499 | CG5043-PA | 198..358 | 33..193 | 236 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16071-PA | 347 | GI16071-PA | 25..267 | 5..245 | 322 | 38.1 | Plus |
Dmoj\GI16060-PA | 522 | GI16060-PA | 218..352 | 37..171 | 187 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19366-PA | 233 | GL19366-PA | 17..197 | 16..202 | 175 | 28.2 | Plus |
Dper\GL19365-PA | 524 | GL19365-PA | 216..357 | 37..178 | 167 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18621-PA | 233 | GA18621-PA | 17..197 | 16..202 | 175 | 28.2 | Plus |
Dpse\GA18616-PA | 524 | GA18616-PA | 216..357 | 37..178 | 168 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17240-PA | 322 | GM17240-PA | 1..322 | 1..327 | 1435 | 84.1 | Plus |
Dsec\GM17238-PA | 500 | GM17238-PA | 202..353 | 37..188 | 186 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24110-PA | 322 | GD24110-PA | 1..322 | 1..327 | 1416 | 83.5 | Plus |
Dsim\GD24109-PA | 500 | GD24109-PA | 202..353 | 37..188 | 185 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16191-PA | 269 | GJ16191-PA | 49..264 | 13..226 | 382 | 46.8 | Plus |
Dvir\GJ16190-PA | 518 | GJ16190-PA | 214..348 | 37..171 | 180 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10591-PA | 311 | GK10591-PA | 22..304 | 35..320 | 492 | 39.3 | Plus |