BDGP Sequence Production Resources |
Search the DGRC for AT13267
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 132 |
Well: | 67 |
Vector: | pOTB7 |
Associated Gene/Transcript | hid-RA |
Protein status: | AT13267.pep: gold |
Preliminary Size: | 3988 |
Sequenced Size: | 1893 |
Gene | Date | Evidence |
---|---|---|
CG5123 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5123 | 2002-01-11 | Blastp of sequenced clone |
CG5123 | 2003-01-01 | Sim4 clustering to Release 3 |
W | 2008-04-29 | Release 5.5 accounting |
W | 2008-08-15 | Release 5.9 accounting |
W | 2008-12-18 | 5.12 accounting |
1893 bp (1893 high quality bases) assembled on 2002-01-11
GenBank Submission: AY075188
> AT13267.complete AAAGTTTCTAATATTCAAAATCTTGCACAAGAAATACAAAATCAATTAAA GTGAACTCTAACCAAAAGTTGTACACAAAATAAAAAGCAAAACAAAGCAG CGAAGAACAATCACAAGAAGAGCAAAGTGCCAACAAAGTGCAGGAAGGAA GGAAGCGGATAAGGACAAAAAGGAAGCCAGCACACACACACACACACCCA CACAATGGCCGTGCCCTTTTATTTGCCCGAGGGCGGCGCCGATGACGTAG CGTCGAGTTCATCGGGAGCCTCGGGCAACTCCTCCCCCCACAACCACCCA CTTCCCTCGAGCGCATCCTCGTCCGTCTCCTCCTCGGGCGTGTCCTCGGC CTCCGCCTCCTCGGCCTCATCTTCGTCCTCCGCATCGTCGGACGGCGCCA GCAGCGCCGCCTCGCAATCGCCGAACACCACCACCTCGTCGGCCACGCAG ACGCCGATGCAGTCTCCACTGCCCACCGACCAAGTGCTATACGCCCTCTA CGAGTGGGTCAGGATGTACCAGAGCCAGCAGAGTGCCCCGCAAATCTTCC AGTATCCGCCGCCAAGCCCCTCTTGCAATTTCACGGGCGGCGATGTGTTC TTTCCGCACGGCCATCCGAATCCGAACTCGAATCCCCATCCGCGCACCCC CCGAACCAGCGTGAGCTTCTCCTCCGGCGAGGAGTACAACTTCTTCCGGC AGCAGCAGCCGCAACCACATCCGTCATATCCGGCGCCATCAACACCGCAG CCAATGCCACCGCAGTCAGCGCCGCCGATGCACTGCAGCCACAGCTACCC GCAGCAGTCGGCGCACATGATGCCACACCATTCCGCTCCCTTCGGAATGG GCGGTACCTACTACGCGGGCTACACGCCGCCACCCACTCCGAACACGGCC AGTGCGGGCACCTCCAGCTCATCGGCGGCCTTCGGCTGGCACGGCCACCC CCACAGCCCCTTCACGTCGACCTCCACGCCGTTATCGGCGCCAGTGGCGC CCAAGATGCGCCTGCAGCGCAGCCAGTCGGATGCGGCCAGACGCAAGCGA TTGACCTCGACGGGCGAGGATGAGCGCGAGTACCAGAGCGATCATGAGGC CACTTGGGACGAGTTTGGCGATCGCTACGACAACTTTACGGCCGGCCGGG AGCGTCTGCAGGAGTTCAATGGACGCATCCCGCCCCGGAAGAAGAAGAGC TCCAATAGCCACTCGAGCAGCAGCAATAATCCAGTCTGCCATACCGATAG CCAGCCCGGTGGTACATCCCAAGCGGAGAGCGGTGCCATCCATGGCCACA TCAGTCAGCAGCGACAGGTGGAGCGAGAACGACAAAAGGCGAAGGCCGAG AAGAAGAAACCACAGAGCTTCACTTGGCCAACTGTTGTGACCGTTTTCGT TTTGGCCATGGGCTGTGGCTTCTTTGCGGCGCGATGAAAGCGCAGGAGAC GTGTAATCGAATGATCTATAGTGAAATCAGCTAGCCCTTAAGATATATGC CGATCTAAACATAGTTGTAGTTAAACCGTACATAAGTGCAACGAATTTAT TGAACTGCAGGAGCGAAAGCAGAAAGTCATTAATTCGTAAACGGATTGTT AGATACACAAACAGCCAACATACACGAAGAGTGTGCCTAAGATTAAGAAG GTTGACGGGACACAAGAACAATATATTCTATCTGTCTATGGTAACTGCAT TTGTATTTCTAAAACGAAACGAAAGATAACAATCTTAACTGCTCAAAGTA ATGAAAACTCTTAGACTGGCAAGAGACTCAAATCACACTTATTTTTTTGC TGATCCATATTTTTGTACAACCTTTTGAGCGATATTTACAAATTATACTA GTACAAAAAAAAGAGAGAGAGAGATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Wrinkled-RA | 4040 | Wrinkled-RA | 316..2199 | 1..1888 | 9310 | 99.6 | Plus |
Wrinkled.a | 4008 | Wrinkled.a | 316..1668 | 1..1357 | 6700 | 99.7 | Plus |
Wrinkled.a | 4008 | Wrinkled.a | 1666..2190 | 1364..1888 | 2580 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 18174418..18174952 | 535..1 | 2675 | 100 | Minus |
chr3L | 24539361 | chr3L | 18159198..18159718 | 1875..1355 | 2605 | 100 | Minus |
chr3L | 24539361 | chr3L | 18162665..18163173 | 1043..535 | 2485 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 18161682..18161995 | 1356..1043 | 1540 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 18169560..18170093 | 1888..1355 | 2625 | 99.4 | Minus |
3L | 28110227 | 3L | 18184792..18185322 | 535..1 | 2580 | 99.3 | Minus |
3L | 28110227 | 3L | 18173047..18173555 | 1043..535 | 2545 | 100 | Minus |
3L | 28110227 | 3L | 18172060..18172373 | 1356..1043 | 1570 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 18162660..18163193 | 1888..1355 | 2625 | 99.4 | Minus |
3L | 28103327 | 3L | 18177892..18178422 | 535..1 | 2590 | 99.2 | Minus |
3L | 28103327 | 3L | 18166147..18166655 | 1043..535 | 2545 | 100 | Minus |
3L | 28103327 | 3L | 18165160..18165473 | 1356..1043 | 1570 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18161682..18161994 | 1044..1356 | 99 | <- | Minus |
chr3L | 18159198..18159716 | 1357..1875 | 100 | <- | Minus |
chr3L | 18162665..18163172 | 536..1043 | 99 | <- | Minus |
chr3L | 18174418..18174571 | 382..535 | 100 | == | Minus |
chr3L | 18174638..18174952 | 1..315 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 1..1233 | 205..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 1..1233 | 205..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 1..1233 | 205..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 1..1233 | 205..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hid-RA | 1..1233 | 205..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 316..2186 | 1..1875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 316..2186 | 1..1875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 320..2190 | 1..1875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
W-RA | 316..2186 | 1..1875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hid-RA | 320..2190 | 1..1875 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18169573..18170091 | 1357..1875 | 100 | <- | Minus |
3L | 18172060..18172372 | 1044..1356 | 100 | <- | Minus |
3L | 18173047..18173554 | 536..1043 | 100 | <- | Minus |
3L | 18184792..18185322 | 1..535 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18169573..18170091 | 1357..1875 | 100 | <- | Minus |
3L | 18172060..18172372 | 1044..1356 | 100 | <- | Minus |
3L | 18173047..18173554 | 536..1043 | 100 | <- | Minus |
3L | 18184792..18185322 | 1..535 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18169573..18170091 | 1357..1875 | 100 | <- | Minus |
3L | 18172060..18172372 | 1044..1356 | 100 | <- | Minus |
3L | 18173047..18173554 | 536..1043 | 100 | <- | Minus |
3L | 18184792..18185322 | 1..535 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18165160..18165472 | 1044..1356 | 100 | <- | Minus |
arm_3L | 18162673..18163191 | 1357..1875 | 100 | <- | Minus |
arm_3L | 18166147..18166654 | 536..1043 | 100 | <- | Minus |
arm_3L | 18177892..18178422 | 1..535 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18162673..18163191 | 1357..1875 | 100 | <- | Minus |
3L | 18165160..18165472 | 1044..1356 | 100 | <- | Minus |
3L | 18166147..18166654 | 536..1043 | 100 | <- | Minus |
3L | 18177892..18178422 | 1..535 | 99 | Minus |
Translation from 204 to 1436
> AT13267.pep MAVPFYLPEGGADDVASSSSGASGNSSPHNHPLPSSASSSVSSSGVSSAS ASSASSSSSASSDGASSAASQSPNTTTSSATQTPMQSPLPTDQVLYALYE WVRMYQSQQSAPQIFQYPPPSPSCNFTGGDVFFPHGHPNPNSNPHPRTPR TSVSFSSGEEYNFFRQQQPQPHPSYPAPSTPQPMPPQSAPPMHCSHSYPQ QSAHMMPHHSAPFGMGGTYYAGYTPPPTPNTASAGTSSSSAAFGWHGHPH SPFTSTSTPLSAPVAPKMRLQRSQSDAARRKRLTSTGEDEREYQSDHEAT WDEFGDRYDNFTAGRERLQEFNGRIPPRKKKSSNSHSSSSNNPVCHTDSQ PGGTSQAESGAIHGHISQQRQVERERQKAKAEKKKPQSFTWPTVVTVFVL AMGCGFFAAR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10826-PA | 435 | GF10826-PA | 1..435 | 1..410 | 1179 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15751-PA | 419 | GG15751-PA | 1..419 | 1..410 | 1666 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17120-PA | 419 | GH17120-PA | 1..419 | 1..410 | 833 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hid-PB | 410 | CG5123-PB | 1..410 | 1..410 | 2201 | 100 | Plus |
hid-PA | 410 | CG5123-PA | 1..410 | 1..410 | 2201 | 100 | Plus |
Muc91C-PB | 949 | CG7709-PB | 586..909 | 16..357 | 161 | 26.3 | Plus |
Muc91C-PA | 950 | CG7709-PA | 587..910 | 16..357 | 161 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11723-PA | 394 | GI11723-PA | 1..394 | 1..410 | 683 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22717-PA | 403 | GL22717-PA | 1..403 | 1..410 | 874 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18676-PA | 405 | GA18676-PA | 1..405 | 1..410 | 873 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14948-PA | 410 | GM14948-PA | 1..410 | 1..410 | 2096 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12350-PA | 410 | GD12350-PA | 1..410 | 1..410 | 2099 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11396-PA | 396 | GJ11396-PA | 1..396 | 1..410 | 807 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11627-PA | 445 | GK11627-PA | 1..336 | 1..338 | 653 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22086-PA | 417 | GE22086-PA | 1..417 | 1..410 | 2029 | 96.2 | Plus |
Translation from 204 to 1436
> AT13267.hyp MAVPFYLPEGGADDVASSSSGASGNSSPHNHPLPSSASSSVSSSGVSSAS ASSASSSSSASSDGASSAASQSPNTTTSSATQTPMQSPLPTDQVLYALYE WVRMYQSQQSAPQIFQYPPPSPSCNFTGGDVFFPHGHPNPNSNPHPRTPR TSVSFSSGEEYNFFRQQQPQPHPSYPAPSTPQPMPPQSAPPMHCSHSYPQ QSAHMMPHHSAPFGMGGTYYAGYTPPPTPNTASAGTSSSSAAFGWHGHPH SPFTSTSTPLSAPVAPKMRLQRSQSDAARRKRLTSTGEDEREYQSDHEAT WDEFGDRYDNFTAGRERLQEFNGRIPPRKKKSSNSHSSSSNNPVCHTDSQ PGGTSQAESGAIHGHISQQRQVERERQKAKAEKKKPQSFTWPTVVTVFVL AMGCGFFAAR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hid-PB | 410 | CG5123-PB | 1..410 | 1..410 | 2201 | 100 | Plus |
hid-PA | 410 | CG5123-PA | 1..410 | 1..410 | 2201 | 100 | Plus |
Muc91C-PB | 949 | CG7709-PB | 586..909 | 16..357 | 161 | 26.3 | Plus |
Muc91C-PA | 950 | CG7709-PA | 587..910 | 16..357 | 161 | 26.3 | Plus |