BDGP Sequence Production Resources |
Search the DGRC for AT13296
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 132 |
Well: | 96 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG8136-RC |
Protein status: | AT13296.pep: gold |
Sequenced Size: | 1548 |
Gene | Date | Evidence |
---|---|---|
CG9790 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8136 | 2002-05-29 | Blastp of sequenced clone |
CG8136 | 2008-04-29 | Release 5.5 accounting |
CG8136 | 2008-08-15 | Release 5.9 accounting |
CG8136 | 2008-12-18 | 5.12 accounting |
1548 bp (1548 high quality bases) assembled on 2002-05-29
GenBank Submission: AY118279
> AT13296.complete AAATTTGTAAGCTCTGTAAATTCAAAACCAGAACTGCTGCAGGCCAGTGG CGAAGTTAATTTGTCAGAGGAAAACTCAAGCCATCTCCATGGATAAAAAC CACAAAAGAGGGGTTTGGACGTTCAATGTCTAGTAGCAGTCGCCGCGTCA TGTGGAAGCTCAACGAGGAGGAGGAGACATTCGACTCCTTGGTCAATTAT CGGCGGCTTCCTTCGCGCAGCCTAAACCGAAGTCAGGTGACCGATGTGCC CACCAAGGGACACACTACCTCCGAAAATTGCCAGCTGCCAGCGCAAGAGT TGGAAACAAAGAGCGCCACCAACGAACAAGGTGCATTGGGCATAATGTCG GTTAGCCTACCGCAAACAACCAGGAATTCCCATCAATCGTCGGCCACGTC ACTGCCGGAGGCCAAGGGATGCACTGCCACCGAAAACTGCCAGTTGCTAG CGCAAGAGGCGGAAACAAAGAACGCCAGCAACGAACAAGGTGGATTGGGC AAAATGTCGGTTAGCCTGCCGCAACAAAACTGGAACGCCAATCAATCGTC GGCCACGTCACTGCCGGAGGCCAAGGAGATCAGCTCCAAAGAGCAGGCGA TCATCTACTGGCGGCGTCTTTTCGATGGTATCCACAAGCGCCAGCGTGGC GAAAGAAAAGTTGCAGCAATGCAGCCCGAAAATACCACAGATGTCGTGCT GACGTCCAAGCCAAACCTGGCATTGCGCTACAAGCCCTCCCATGAGTCGC TTAAAAACAAGCGGATCAAGGACCTGGCTCCTGAACGATGCCCGAGCACG TCCCGGGGATCAACGTCCTGCAAACTGGTATCGGACCTCAAGATGGAGAC GTTCAGCCTGCCGCCGCAGCAGACGTGTGTGGTGCGCGAGGTGGAGCCTC GGTTTGGCCAGCGCCGACGCATGTTGTTGGCCAACGACACGGATTCGTGC TACTCCGGCGAGCTGGAGGTCCCCAAAAACAGTCCCGTCCAGGAGCCAGG ACCCTATCCGCGCAGCGAACTGATCAGTGTCCATGTCTCGGCGCCCACCA GCTCCTCTTTTACGGGAGCAACACGGCGGAGTCTGTCTCCAACTAGGCAG CGCACTGCGACGAGCAAGGTGGCCGCCGGGACGAAGGGCGGACCATCACC AGCAGTTGGGGGCAACAAGTGCTCGAGCGTCAGCAGCGGGAGTGCAGGTA CCAGCCAGCTGCCTAATTTCCGCCAGCGGCAGCAAGAGCTCCATCGCTAT CGCGTTATGATCGAGCAACGGCGCCTCGATCTACTCGAGCTCAAGATAGC CCGCGAACGCGAGGAGGCGCTGCACAGCGAGGTTCTGTTTCACAAGGAAC TGCAGATCAAGGAGAACATGATCAAGGTGTACGAGGACAACGACTGCTCC AACGCCTAGGACTTCCTTTATTCCTAACTCTTTCGACCCCAAATTCAGAA AGGTATTTTACACTTGGCAATGGCCCTGGCCTCAGTAGTTCAAAACACTC AGTCAAATAAAACCGAAATTCATTTAGACATCCCAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4547596..4549024 | 106..1534 | 7130 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 4547425..4547529 | 1..105 | 525 | 100 | Plus |
chr3R | 27901430 | chr3R | 4547743..4547907 | 412..576 | 510 | 87.3 | Plus |
chr3R | 27901430 | chr3R | 4547902..4548066 | 253..417 | 510 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8721623..8723053 | 106..1536 | 7155 | 100 | Plus |
3R | 32079331 | 3R | 8721452..8721556 | 1..105 | 525 | 100 | Plus |
3R | 32079331 | 3R | 8721770..8721934 | 412..576 | 510 | 87.3 | Plus |
3R | 32079331 | 3R | 8721929..8722093 | 253..417 | 510 | 87.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4547425..4547529 | 1..105 | 100 | -> | Plus |
chr3R | 4547596..4549024 | 106..1534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RB | 1..1326 | 89..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RB | 1..1326 | 89..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RA | 1..1323 | 89..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RB | 1..1326 | 89..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RA | 1..1323 | 89..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RC | 82..1615 | 1..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RC | 82..1615 | 1..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RC | 82..1615 | 1..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RC | 82..1615 | 1..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8136-RC | 82..1615 | 1..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8721452..8721556 | 1..105 | 100 | -> | Plus |
3R | 8721623..8723051 | 106..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8721452..8721556 | 1..105 | 100 | -> | Plus |
3R | 8721623..8723051 | 106..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8721452..8721556 | 1..105 | 100 | -> | Plus |
3R | 8721623..8723051 | 106..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4547174..4547278 | 1..105 | 100 | -> | Plus |
arm_3R | 4547345..4548773 | 106..1534 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8462454..8463882 | 106..1534 | 100 | Plus | |
3R | 8462283..8462387 | 1..105 | 100 | -> | Plus |
Translation from 125 to 1408
> AT13296.pep MSSSSRRVMWKLNEEEETFDSLVNYRRLPSRSLNRSQVTDVPTKGHTTSE NCQLPAQELETKSATNEQGALGIMSVSLPQTTRNSHQSSATSLPEAKGCT ATENCQLLAQEAETKNASNEQGGLGKMSVSLPQQNWNANQSSATSLPEAK EISSKEQAIIYWRRLFDGIHKRQRGERKVAAMQPENTTDVVLTSKPNLAL RYKPSHESLKNKRIKDLAPERCPSTSRGSTSCKLVSDLKMETFSLPPQQT CVVREVEPRFGQRRRMLLANDTDSCYSGELEVPKNSPVQEPGPYPRSELI SVHVSAPTSSSFTGATRRSLSPTRQRTATSKVAAGTKGGPSPAVGGNKCS SVSSGSAGTSQLPNFRQRQQELHRYRVMIEQRRLDLLELKIAREREEALH SEVLFHKELQIKENMIKVYEDNDCSNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18184-PA | 410 | GF18184-PA | 20..410 | 6..427 | 1067 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12483-PA | 380 | GG12483-PA | 22..380 | 8..427 | 1424 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18575-PA | 316 | GH18575-PA | 127..313 | 197..421 | 374 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8136-PD | 427 | CG8136-PD | 1..427 | 1..427 | 2185 | 100 | Plus |
CG8136-PC | 427 | CG8136-PC | 1..427 | 1..427 | 2185 | 100 | Plus |
CG8136-PB | 441 | CG8136-PB | 15..441 | 1..427 | 2185 | 100 | Plus |
CG8136-PA | 440 | CG8136-PA | 14..440 | 1..427 | 2185 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22392-PA | 357 | GI22392-PA | 24..357 | 9..427 | 480 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12474-PA | 438 | GL12474-PA | 104..438 | 143..427 | 505 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27520-PA | 438 | GA27520-PA | 104..438 | 143..427 | 502 | 37 | Plus |
Dpse\GA27520-PB | 416 | GA27520-PB | 82..416 | 143..427 | 501 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23756-PA | 441 | GM23756-PA | 22..441 | 8..427 | 2050 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18567-PA | 417 | GD18567-PA | 22..417 | 8..427 | 1901 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22677-PA | 368 | GJ22677-PA | 119..368 | 155..427 | 482 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11277-PA | 382 | GK11277-PA | 15..382 | 1..427 | 742 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25900-PA | 386 | GE25900-PA | 22..386 | 8..427 | 1463 | 70.1 | Plus |
Translation from 125 to 1408
> AT13296.hyp MSSSSRRVMWKLNEEEETFDSLVNYRRLPSRSLNRSQVTDVPTKGHTTSE NCQLPAQELETKSATNEQGALGIMSVSLPQTTRNSHQSSATSLPEAKGCT ATENCQLLAQEAETKNASNEQGGLGKMSVSLPQQNWNANQSSATSLPEAK EISSKEQAIIYWRRLFDGIHKRQRGERKVAAMQPENTTDVVLTSKPNLAL RYKPSHESLKNKRIKDLAPERCPSTSRGSTSCKLVSDLKMETFSLPPQQT CVVREVEPRFGQRRRMLLANDTDSCYSGELEVPKNSPVQEPGPYPRSELI SVHVSAPTSSSFTGATRRSLSPTRQRTATSKVAAGTKGGPSPAVGGNKCS SVSSGSAGTSQLPNFRQRQQELHRYRVMIEQRRLDLLELKIAREREEALH SEVLFHKELQIKENMIKVYEDNDCSNA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8136-PD | 427 | CG8136-PD | 1..427 | 1..427 | 2185 | 100 | Plus |
CG8136-PC | 427 | CG8136-PC | 1..427 | 1..427 | 2185 | 100 | Plus |
CG8136-PB | 441 | CG8136-PB | 15..441 | 1..427 | 2185 | 100 | Plus |
CG8136-PA | 440 | CG8136-PA | 14..440 | 1..427 | 2185 | 100 | Plus |