BDGP Sequence Production Resources |
Search the DGRC for AT13385
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 133 |
Well: | 85 |
Vector: | pOTB7 |
Associated Gene/Transcript | cola-RA |
Protein status: | AT13385.pep: gold |
Sequenced Size: | 2122 |
Gene | Date | Evidence |
---|---|---|
CG30363 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30366 | 2008-04-29 | Release 5.5 accounting |
CG30366 | 2008-08-15 | Release 5.9 accounting |
CG30363 | 2008-08-15 | Release 5.9 accounting |
CG30366 | 2008-12-18 | 5.12 accounting |
CG30363 | 2008-12-18 | 5.12 accounting |
2122 bp (2122 high quality bases) assembled on 2005-10-06
GenBank Submission: BT023913.1
> AT13385.complete CTTCACCCTTTCGGCTAACGCCTCTCTAAATTAGATATTCAAAAAAGGCA GGCACCATGATCACCTCGAAGCTGCGCCTGCGCCGAGCACAGATTCCCAG GTTTTCGATCACGAGTCGATGGTACAATTGGGGCAGCTACGATGCCAGCT CTGGGGAGTGCTGCAAGATGCGCGACAAGGATACCACGGCCTGCAAGGAT GGAAAGTGGTTCTGTCCGGTCAAGTACGAGCCCAACAAGTGTTACGAGAA ACCATCCTTTGCAGTAGAAGAATACTCCCAGTATCTGCAGGAGATCTATA ATCGAGGCAAGACCAATCCCGACTGCTTGCTGAAGCTGATCCGCCACGAC GCTGAACATTACAAGCCGTCAGATAAGCAGCGCAAATTCCAAAGGACTTG GCCAGAGTGTCCGCTCCTCTGGCTACGACCAAAGGACTATTGCTGTCCCG ATCAGGAGGTATATCAGCCCATGAATCGTCGCATCCGCCCCCCGCAGGAA CCACCACTTTCGGCTATTGAAAAGCACCTCTTCCAGATGAGTATCTTTTG CAAGTCCGTCAGGGCTCCCTGTTGTAAAGTAGGTCGACGTCCGCCCAAAT GCACCAAGCCGCGGAGGCCATCCGAATGCTGCAAGAAGTTCACTCCGATG CCTAGTTTTTCGGAGGCCTGCCGCCATCTGATACCACGATTCTGTGGCTC CGAGTGTGCCTGTCGTGGAGGGAGCTTATGTGAAATGTGGAACACGTATA ATATGTGCAACAAGTCGCGCAGGAACTGCACCAAGCCGTTAATAGGGTAT TCTCCGTTACGATCCAGGATGCGATTTCCATTTTGAGAGATTCCTAAGTG TGCAGTCGTCTGATTTATTTAGAGGTTCTTCAACAAAGAGTATGCGGAAG TAACCTAACCAGTGACCTAGTTTTCCCGGCCTAGTAACTCACAAGTTCGA CAGCTTTCGAAAAATCATTAGGCCAAATCAAAATTCTCAAAATTTTAAGC ATGCAGTCAGCACTGTGGATCTTTTGCAGACAAGGTTTCAGGAGCTTTGC CACTAAAGCGCAAGGTTTCAGAAGCTTCGCCAGCAAAGTGACCTACCACG CGGATCCGCCATGCCAACCTGTCGACCCTTTGTGCCATCATGTTCCAAGC GGCAGATGCGTGCAGGCCAGGGAAACGATCAATCTCAAACTGCCACATGA GAGGTTATTGAAGCAAGAACGCGATCAGAAGAAGGAGAGGAAATGCTGTG TCCTGCGATCGGCGGCCAAAAATCCCTGCGTAGAGATAAGACGACCCAAA GCCGCAAAGCTGGAGGAGAAGCCATTCCGTTCGATGTGGGAGCCACCTTG CAAGGCGAACGAGCAGCCGTTCTGCAAGGAAATGCTGCCCCGCTTCGATG CGATGTACTACCATCCCTCAAACAAGTGCCGCTGCTACCAACGCACCTGG GTGGAGTGTTCACCCGTTAAGAAACGGCTGAAGAAGGTTTGCTGCCTGGA CGCCATCGAACCTCCTGAGATTCTGTACCGGATCAGGCCGCCCTGCCCAG GAACTTGCCAAATCAACTATAAGGCTCGAAGGCTACTCTGTGCGGATGGA GAATGGGAGCGGGACCCAACGAGGAAGTGTCCGAAATTCTTTCACCCCTG TTGCAAGCTGGCTCGCTGCAATCCTCGTTGCTCCAGAGGCAGAAAGCCTA CCCTATGCACCAAGTTGCGAGCTCCATATCCTTGTTACTCAGAAAAAATA AGAGGAACAAGACCGCTCCGAAAAAGAGAGTGCCTTTGCTTGGAGACCAC CCCGAAATGTATAGCTCTTGCGGAAAGAATGAGACGCGATGGATTAAATC TGTGATAATCCTACCGAAACACGTAAAAGTGCAAGTTGAGGGTCTGGCTT TTAAAACGAAGTAATAGATACAAAGTGATGTTTCTATTAATTTGCTTTAG CAGTCAGGTATCCGATCCTAACAAAAAACCATGGAAATTACTTAATAATA ACAATTTGGCATACAAAATTTATAATTGAATTTATGAGTTGTAATAAAAC ATATAATAAAAATTCATTAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4250795..4252871 | 2074..1 | 10165 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8363271..8365345 | 2075..1 | 10330 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 1753..1854 | 1974..2074 | 146 | 65.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4250832..4252871 | 1..2038 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30366-RB | 1..855 | 1001..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
swif-RB | 1..855 | 1001..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
swif-RA | 1..855 | 1001..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30366-RB | 1..855 | 1001..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
swif-RA | 1..855 | 1001..1855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30366-RB | 1..2074 | 1..2074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
swif-RB | 1..2074 | 1..2074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
swif-RB | 1..2074 | 1..2074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30366-RB | 1..2074 | 1..2074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cola-RA | 1..2074 | 1..2074 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8363272..8365345 | 1..2074 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8363272..8365345 | 1..2074 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8363272..8365345 | 1..2074 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4250777..4252850 | 1..2074 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8364471..8366544 | 1..2074 | 99 | Minus |
Translation from 56 to 835
> AT13385.pep MITSKLRLRRAQIPRFSITSRWYNWGSYDASSGECCKMRDKDTTACKDGK WFCPVKYEPNKCYEKPSFAVEEYSQYLQEIYNRGKTNPDCLLKLIRHDAE HYKPSDKQRKFQRTWPECPLLWLRPKDYCCPDQEVYQPMNRRIRPPQEPP LSAIEKHLFQMSIFCKSVRAPCCKVGRRPPKCTKPRRPSECCKKFTPMPS FSEACRHLIPRFCGSECACRGGSLCEMWNTYNMCNKSRRNCTKPLIGYSP LRSRMRFPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19808-PA | 266 | GF19808-PA | 1..266 | 1..259 | 684 | 53.4 | Plus |
Dana\GF20746-PA | 237 | GF20746-PA | 88..224 | 96..231 | 165 | 35.5 | Plus |
Dana\GF12592-PA | 303 | GF12592-PA | 142..283 | 95..228 | 154 | 33.1 | Plus |
Dana\GF19809-PA | 280 | GF19809-PA | 109..240 | 83..203 | 150 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10651-PA | 259 | GG10651-PA | 1..259 | 1..259 | 1218 | 87.6 | Plus |
Dere\GG10647-PA | 303 | GG10647-PA | 143..283 | 95..228 | 171 | 34.8 | Plus |
Dere\GG11285-PA | 232 | GG11285-PA | 88..224 | 96..231 | 147 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20819-PA | 256 | GH20819-PA | 6..253 | 1..256 | 334 | 35.5 | Plus |
Dgri\GH20817-PA | 240 | GH20817-PA | 86..220 | 90..228 | 160 | 40.6 | Plus |
Dgri\GH18815-PA | 169 | GH18815-PA | 25..166 | 96..243 | 145 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cola-PA | 259 | CG30363-PA | 1..259 | 1..259 | 1486 | 100 | Plus |
CG2127-PB | 289 | CG2127-PB | 127..269 | 95..228 | 239 | 38.5 | Plus |
CG2127-PA | 305 | CG2127-PA | 143..285 | 95..228 | 239 | 38.5 | Plus |
CG33340-PA | 229 | CG33340-PA | 85..218 | 96..228 | 201 | 37.5 | Plus |
swif-PB | 284 | CG30366-PB | 81..263 | 34..219 | 183 | 30.6 | Plus |
swif-PA | 284 | CG30366-PA | 81..263 | 34..219 | 183 | 30.6 | Plus |
hubl-PB | 291 | CG30364-PB | 130..268 | 96..226 | 172 | 37.6 | Plus |
hubl-PA | 291 | CG30364-PA | 130..268 | 96..226 | 172 | 37.6 | Plus |
CG11635-PA | 286 | CG11635-PA | 92..229 | 88..226 | 165 | 31.8 | Plus |
CG8701-PA | 246 | CG8701-PA | 83..216 | 86..219 | 162 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20916-PA | 257 | GI20916-PA | 19..254 | 18..256 | 403 | 37.7 | Plus |
Dmoj\GI20912-PA | 250 | GI20912-PA | 93..230 | 95..228 | 168 | 37.5 | Plus |
Dmoj\GI20909-PA | 248 | GI20909-PA | 97..231 | 102..232 | 163 | 37.2 | Plus |
Dmoj\GI10075-PA | 236 | GI10075-PA | 90..226 | 96..231 | 155 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10866-PA | 259 | GL10866-PA | 95..242 | 90..231 | 150 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15259-PA | 259 | GA15259-PA | 95..242 | 90..231 | 150 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20696-PA | 259 | GM20696-PA | 1..259 | 1..259 | 1323 | 96.5 | Plus |
Dsec\GM20692-PA | 305 | GM20692-PA | 143..285 | 95..228 | 180 | 37.8 | Plus |
Dsec\GM26593-PA | 232 | GM26593-PA | 88..224 | 96..231 | 149 | 36.7 | Plus |
Dsec\GM20697-PA | 285 | GM20697-PA | 118..251 | 83..206 | 144 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15279-PA | 259 | GD15279-PA | 1..259 | 1..259 | 1319 | 96.1 | Plus |
Dsim\GD15275-PA | 305 | GD15275-PA | 143..285 | 95..228 | 187 | 38.5 | Plus |
Dsim\GD21095-PA | 232 | GD21095-PA | 88..224 | 96..231 | 149 | 36.7 | Plus |
Dsim\GD15280-PA | 285 | GD15280-PA | 118..251 | 83..206 | 144 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20646-PA | 263 | GJ20646-PA | 6..260 | 1..256 | 485 | 41.9 | Plus |
Dvir\GJ20641-PA | 249 | GJ20641-PA | 74..231 | 77..230 | 201 | 35.2 | Plus |
Dvir\GJ23810-PA | 238 | GJ23810-PA | 25..228 | 38..231 | 161 | 29.8 | Plus |
Dvir\GJ20639-PA | 249 | GJ20639-PA | 73..232 | 80..232 | 155 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15759-PA | 265 | GK15759-PA | 23..265 | 20..258 | 573 | 49 | Plus |
Dwil\GK19110-PA | 237 | GK19110-PA | 90..227 | 96..231 | 163 | 38.8 | Plus |
Dwil\GK19093-PA | 213 | GK19093-PA | 50..174 | 87..203 | 159 | 39.4 | Plus |
Dwil\GK15825-PA | 289 | GK15825-PA | 130..269 | 96..228 | 155 | 34.3 | Plus |
Dwil\GK15761-PA | 301 | GK15761-PA | 140..253 | 95..203 | 151 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23102-PA | 259 | GE23102-PA | 1..259 | 1..259 | 1241 | 90 | Plus |
Dyak\GE23064-PA | 307 | GE23064-PA | 145..287 | 95..228 | 184 | 37.1 | Plus |
Dyak\GE23113-PA | 284 | GE23113-PA | 119..251 | 84..206 | 151 | 37.3 | Plus |
Dyak\GE23478-PA | 232 | GE23478-PA | 88..224 | 96..231 | 146 | 37.9 | Plus |
Translation from 1000 to 1854
> AT13385.hyp MQSALWIFCRQGFRSFATKAQGFRSFASKVTYHADPPCQPVDPLCHHVPS GRCVQARETINLKLPHERLLKQERDQKKERKCCVLRSAAKNPCVEIRRPK AAKLEEKPFRSMWEPPCKANEQPFCKEMLPRFDAMYYHPSNKCRCYQRTW VECSPVKKRLKKVCCLDAIEPPEILYRIRPPCPGTCQINYKARRLLCADG EWERDPTRKCPKFFHPCCKLARCNPRCSRGRKPTLCTKLRAPYPCYSEKI RGTRPLRKRECLCLETTPKCIALAERMRRDGLNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
swif-PB | 284 | CG30366-PB | 1..284 | 1..284 | 1606 | 100 | Plus |
swif-PA | 284 | CG30366-PA | 1..284 | 1..284 | 1606 | 100 | Plus |
hubl-PB | 291 | CG30364-PB | 54..272 | 37..279 | 293 | 31 | Plus |
hubl-PA | 291 | CG30364-PA | 54..272 | 37..279 | 293 | 31 | Plus |
CG11635-PA | 286 | CG11635-PA | 41..235 | 88..279 | 219 | 33.6 | Plus |