BDGP Sequence Production Resources |
Search the DGRC for AT13486
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 134 |
Well: | 86 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG4286-RA |
Protein status: | AT13486.pep: gold |
Preliminary Size: | 748 |
Sequenced Size: | 806 |
Gene | Date | Evidence |
---|---|---|
CG4286 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4286 | 2002-06-10 | Blastp of sequenced clone |
CG4286 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4286 | 2008-04-29 | Release 5.5 accounting |
CG4286 | 2008-08-15 | Release 5.9 accounting |
CG4286 | 2008-12-18 | 5.12 accounting |
806 bp (806 high quality bases) assembled on 2002-06-10
GenBank Submission: AY070788
> AT13486.complete ACTCCCCCAAATTCGAACCCCCTTCCAACCATCCGCCCCTCCATTCATCT TGGAGAACCAAAGTCATGGCGCACCGCCTCCAGCTCCGTAGCGATGACTT CGACGTTATCGGCGCCGTGCCCCGCAATCTGTCCGTGATCAAGAACTTCC TGAAGCGGGACTGTGCCATCAAGAAACTGATCGACATCGAGGAGGAGTTC CTGCAGGAGTGCGTATTACGCGGCCAGGATCCCATGAATCCGAAGGGTAA ACGTGACAGTGACAGTGGGCCACATGGTAGTGGTTTGGGATCCAATGTGC CCGAACCCAAGCCGGATCCATGTGCTACCAAGACACCGGAGAACACATTG GCCTCCGACTACTGTGATCCCTGTCGCCGACTCAAGACCTCCGTGGTTCT CGAAGAGCTAACCAAGCCGGCCATCACAAATCCGGCTTTCAACAAATCCC TGCCGCCGTACTTCGATGAAGAGAGCGTGATGGGCAACTCGTTGCCCGTG AAGTTCCGTTTCCGGCGCAAGTTCAACAAGTGCGACCAGGAGAAGGCCGG CAACCTGATGTGCACCAACACGCCGAGCACCAATGTGGTCGTGTTGACCA ACTGTTGCGATGTGATGGTCTGGCCCAGTCAACGGGTGGCCCAGATGAAC CGGGTGCCGGTGACCATGCTGTCGGGCGAAGCCGATCTCACGGAGTACAT GCTGGAGGAGGAGACCATTATGTGAGGGAATGGTTGGATGGGTGCAGCTT TTTGGCACATAACGCCGATCAATAAAGCATAAAACCCCAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4286-RA | 990 | CG4286-RA | 136..922 | 1..787 | 3845 | 99.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17064215..17064595 | 408..788 | 99 | <- | Minus |
chr2R | 17064658..17065064 | 1..407 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 1..660 | 66..725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 1..660 | 66..725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 1..660 | 66..725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 1..660 | 66..725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 1..660 | 66..725 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 35..821 | 1..788 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 35..821 | 1..788 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 35..821 | 1..788 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 35..821 | 1..788 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4286-RA | 35..821 | 1..788 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21177754..21178133 | 408..788 | 99 | <- | Minus |
2R | 21178196..21178602 | 1..407 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21177754..21178133 | 408..788 | 99 | <- | Minus |
2R | 21178196..21178602 | 1..407 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21177754..21178133 | 408..788 | 99 | <- | Minus |
2R | 21178196..21178602 | 1..407 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17065259..17065638 | 408..788 | 99 | <- | Minus |
arm_2R | 17065701..17066107 | 1..407 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21178953..21179332 | 408..788 | 99 | <- | Minus |
2R | 21179395..21179801 | 1..407 | 99 | Minus |
Translation from 2 to 724
> AT13486.hyp SPKFEPPSNHPPLHSSWRTKVMAHRLQLRSDDFDVIGAVPRNLSVIKNFL KRDCAIKKLIDIEEEFLQECVLRGQDPMNPKGKRDSDSGPHGSGLGSNVP EPKPDPCATKTPENTLASDYCDPCRRLKTSVVLEELTKPAITNPAFNKSL PPYFDEESVMGNSLPVKFRFRRKFNKCDQEKAGNLMCTNTPSTNVVVLTN CCDVMVWPSQRVAQMNRVPVTMLSGEADLTEYMLEEETIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4286-PA | 219 | CG4286-PA | 1..219 | 22..240 | 1165 | 100 | Plus |
CG30278-PC | 275 | CG30278-PC | 96..221 | 113..238 | 172 | 33.1 | Plus |
CG30278-PB | 275 | CG30278-PB | 96..221 | 113..238 | 172 | 33.1 | Plus |
CG30278-PA | 275 | CG30278-PA | 96..221 | 113..238 | 172 | 33.1 | Plus |
Translation from 65 to 724
> AT13486.pep MAHRLQLRSDDFDVIGAVPRNLSVIKNFLKRDCAIKKLIDIEEEFLQECV LRGQDPMNPKGKRDSDSGPHGSGLGSNVPEPKPDPCATKTPENTLASDYC DPCRRLKTSVVLEELTKPAITNPAFNKSLPPYFDEESVMGNSLPVKFRFR RKFNKCDQEKAGNLMCTNTPSTNVVVLTNCCDVMVWPSQRVAQMNRVPVT MLSGEADLTEYMLEEETIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12970-PA | 220 | GF12970-PA | 1..220 | 1..219 | 941 | 80 | Plus |
Dana\GF12323-PA | 274 | GF12323-PA | 96..221 | 92..217 | 180 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20796-PA | 219 | GG20796-PA | 1..219 | 1..219 | 1084 | 92.2 | Plus |
Dere\GG20708-PA | 275 | GG20708-PA | 97..222 | 92..217 | 162 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21170-PA | 223 | GH21170-PA | 1..223 | 1..219 | 717 | 61.4 | Plus |
Dgri\GH20437-PA | 262 | GH20437-PA | 37..212 | 11..215 | 154 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4286-PA | 219 | CG4286-PA | 1..219 | 1..219 | 1165 | 100 | Plus |
CG30278-PC | 275 | CG30278-PC | 96..221 | 92..217 | 172 | 33.1 | Plus |
CG30278-PB | 275 | CG30278-PB | 96..221 | 92..217 | 172 | 33.1 | Plus |
CG30278-PA | 275 | CG30278-PA | 96..221 | 92..217 | 172 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18765-PA | 213 | GI18765-PA | 1..213 | 1..219 | 679 | 60.3 | Plus |
Dmoj\GI19619-PA | 140 | GI19619-PA | 4..110 | 112..219 | 152 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10168-PA | 211 | GL10168-PA | 1..211 | 1..219 | 729 | 67.1 | Plus |
Dper\GL16937-PA | 261 | GL16937-PA | 34..220 | 1..217 | 196 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18082-PA | 211 | GA18082-PA | 1..211 | 1..219 | 726 | 67.6 | Plus |
Dpse\GA15746-PA | 261 | GA15746-PA | 49..220 | 21..217 | 197 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15741-PA | 219 | GM15741-PA | 1..219 | 1..219 | 1144 | 97.3 | Plus |
Dsec\GM15652-PA | 271 | GM15652-PA | 96..221 | 92..217 | 166 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25219-PA | 219 | GD25219-PA | 1..219 | 1..219 | 1144 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21789-PA | 218 | GJ21789-PA | 1..218 | 1..219 | 728 | 64.5 | Plus |
Dvir\GJ14986-PA | 255 | GJ14986-PA | 35..214 | 11..215 | 210 | 31.2 | Plus |
Dvir\GJ14988-PA | 265 | GJ14988-PA | 51..214 | 23..215 | 172 | 28.2 | Plus |