AT13819.complete Sequence
794 bp (794 high quality bases) assembled on 2002-01-11
GenBank Submission: AY075197
> AT13819.complete
GATACGCAGCTAGTTTTTGAGAATTAACAAAAATTCTCAGTGCAAACAAA
ATTTGAAAAAAAAAGTGAAAAAACGCGACATTTCTTAGAAGCTGTAGAAT
TCAGAGATGTCCAGCAAGAAGCGCATAGATTTAAAGCCCGCGTCCTTCGA
AGACTTGGCCAATCAGGTGTTCGAAAAGTCGAAACAGATGAGTATGTCAA
TGAAGGAGCAGTGCAAGTTGGTCCAGGAGTATCTGAAGGCTAGGCTCGAT
GGGAGTGATGGAAGCGATGCAGAATATAATAGTGATTCCTATTCAGATTT
TGAATCCGAGTCGGATTCCGATTCCGATTCCGATTTCGAGGAGGATTCCC
TTACTGATTCCGATGAGCAAACAGAGGAGAGCAGTGATGAGTCCGAATCG
GAACACAGTGAAGTCGAGGAGCGTACCAAACCATCAGATACTCACAAGAC
TACCAACGGAGGGCTCTGCGAAAAACCAATCTCCAAGGTCGAGCCTGAAC
AATCTCGGCTCGTGGCCTTTGTGGCTCCTCTCAAATCCCCTGCCCCCCGC
ATCCACCGTCGACTGACTATGGCTGGTGGCGTTATAGCTCCTCATAGTCG
CAGTAGTGCCTTCTAAATCATTGGTCAAGCTAGGAGCTAGAGGTTCATCC
AATCGATTTTATTGTTTACACAGTTTGTATTTAAATCATTTTGTAGTACT
TTGTAATTAAAAATCATATCGCGACTTATTTTGAAATAAACGTACCACGT
TCAGTAGCTACCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AT13819.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:30:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4375-RA | 791 | CG4375-RA | 8..626 | 1..620 | 2940 | 98.5 | Plus |
CG4375-RA | 791 | CG4375-RA | 643..791 | 616..762 | 630 | 95.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:07:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 1025969..1026754 | 764..1 | 3395 | 96.3 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:48:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:07:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1026103..1026890 | 766..1 | 3300 | 95.4 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:58:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1026272..1026890 | 620..1 | 2940 | 98.5 | Minus |
2L | 23513712 | 2L | 1026103..1026255 | 766..616 | 650 | 96 | Minus |
Blast to na_te.dros performed on 2019-03-16 16:07:46 has no hits.
AT13819.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:08:46 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 1025969..1026119 | 617..764 | 96 | <- | Minus |
chr2L | 1026140..1026754 | 1..616 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:04:49 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 1..510 | 107..616 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:49:30 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 1..510 | 107..616 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:01:19 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RC | 1..570 | 107..684 | 96 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:16:30 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 1..510 | 107..616 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:20:06 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 1..510 | 107..616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:13:25 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 643..791 | 617..762 | 95 | | Plus |
CG4375-RA | 8..622 | 1..616 | 98 | -> | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:49:29 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 8..622 | 1..616 | 98 | -> | Plus |
CG4375-RA | 643..791 | 617..762 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:01:19 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RC | 1..755 | 1..764 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:16:30 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 8..622 | 1..616 | 98 | -> | Plus |
CG4375-RA | 643..791 | 617..762 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:20:06 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4375-RA | 643..793 | 617..764 | 95 | | Plus |
CG4375-RA | 8..622 | 1..616 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:08:46 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1026105..1026255 | 617..764 | 95 | <- | Minus |
2L | 1026276..1026890 | 1..616 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:08:46 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1026105..1026255 | 617..764 | 95 | <- | Minus |
2L | 1026276..1026890 | 1..616 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:08:46 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1026105..1026255 | 617..764 | 95 | <- | Minus |
2L | 1026276..1026890 | 1..616 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:01:19 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1026105..1026255 | 617..764 | 95 | <- | Minus |
arm_2L | 1026276..1026890 | 1..616 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:50:30 Download gff for
AT13819.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1026276..1026890 | 1..616 | 98 | | Minus |
2L | 1026105..1026255 | 617..764 | 95 | <- | Minus |
AT13819.pep Sequence
Translation from 106 to 615
> AT13819.pep
MSSKKRIDLKPASFEDLANQVFEKSKQMSMSMKEQCKLVQEYLKARLDGS
DGSDAEYNSDSYSDFESESDSDSDSDFEEDSLTDSDEQTEESSDESESEH
SEVEERTKPSDTHKTTNGGLCEKPISKVEPEQSRLVAFVAPLKSPAPRIH
RRLTMAGGVIAPHSRSSAF*
AT13819.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4375-PA | 169 | CG4375-PA | 1..169 | 1..169 | 857 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:44:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16634-PA | 182 | GM16634-PA | 1..172 | 1..168 | 454 | 74.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:44:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22934-PA | 182 | GD22934-PA | 1..171 | 1..167 | 458 | 76.4 | Plus |
AT13819.hyp Sequence
Translation from 106 to 615
> AT13819.hyp
MSSKKRIDLKPASFEDLANQVFEKSKQMSMSMKEQCKLVQEYLKARLDGS
DGSDAEYNSDSYSDFESESDSDSDSDFEEDSLTDSDEQTEESSDESESEH
SEVEERTKPSDTHKTTNGGLCEKPISKVEPEQSRLVAFVAPLKSPAPRIH
RRLTMAGGVIAPHSRSSAF*
AT13819.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4375-PA | 169 | CG4375-PA | 1..169 | 1..169 | 857 | 100 | Plus |