![]() | BDGP Sequence Production Resources |
Search the DGRC for AT13868
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 138 |
Well: | 68 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG18004-RB |
Protein status: | AT13868.pep: gold |
Sequenced Size: | 1187 |
Gene | Date | Evidence |
---|---|---|
CG18004 | 2009-06-08 | Manual selection by Joe Carlson |
1187 bp assembled on 2009-08-05
GenBank Submission: BT089032.1
> AT13868.complete CACAACTGTTGTGCATATTAGCTTACAGATTATTGTTATGCTCTTTTCAA ATCAAAGGTTTTCTTTCACAAGAGATCATTGTTTTAAATTTATATAAATT TCTTAAATGGTGAAACTCAATTTTTAAATTAATGATAACCTAGAACGGTA AATAGTCGTCCGATAACAATGCTTGGGTTGATGATGTGCGAAAAACTGGC AGTTATCGCAATGCTCCCATCTCTATGAGATCCCTGGCCAACCAGGAGGA TGGCGCCATAAAGGACGAGCCGCCGAGCGACGACGAGCCCGCACAGCCCG CCAGAGATCGCGTCCCGCCAATTTCCCGCGGAGCAGCGCCCGCTAGCTCA TCCTCCGTATCCGCGGGCCTGGGCGCAGGCGAGACTGACTTCAAGGAGCG CTACAAGAACCTCAAGAAGAAGCTGAAGTTCCTCATCTATGAGAACGAGT ACTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAAGTTTCC CGGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAAGCCGGC CAAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGGAGCCAG CTTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGACGCCATT CGGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGTGCCTCC GCACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAATCCTAA CCGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCGAAAAAA CAACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACTACAGAC TGCACCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTGCCCGCC AGCTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCGGAATGC ACTTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAAGCCCCTCTAA GTGTTATCCCAATGAAAGCCTGCAGCATCTGATGGAGGACGACTCTCACT CGCACGAGGTGGCCGCCGAGGAGTGCGTGCCCATGGAGTACACAAGTTAA TATTCTTTACTGAGCTAAATATGAAAATACGAAAATAAATTAACTAGATC CAGCTGGATTGATATATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18004-RB | 1168 | CG18004-RB | 1..1168 | 1..1168 | 5825 | 99.9 | Plus |
CG18004-RA | 1250 | CG18004-RA | 201..1142 | 228..1169 | 4695 | 99.8 | Plus |
CG18004.a | 1133 | CG18004.a | 315..1025 | 459..1169 | 3540 | 99.8 | Plus |
CG18004.a | 1133 | CG18004.a | 102..316 | 228..442 | 1075 | 100 | Plus |
CG18004-RA | 1250 | CG18004-RA | 1..128 | 102..229 | 640 | 100 | Plus |
CG18004.a | 1133 | CG18004.a | 1..29 | 201..229 | 145 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 6773181..6773743 | 441..1003 | 2800 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 6772610..6772838 | 1..229 | 1145 | 100 | Plus |
chr2R | 21145070 | chr2R | 6772911..6773124 | 228..441 | 1070 | 100 | Plus |
chr2R | 21145070 | chr2R | 6773801..6773966 | 1003..1168 | 830 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10885590..10886152 | 441..1003 | 2800 | 99.8 | Plus |
2R | 25286936 | 2R | 10885019..10885247 | 1..229 | 1145 | 100 | Plus |
2R | 25286936 | 2R | 10885320..10885533 | 228..441 | 1070 | 100 | Plus |
2R | 25286936 | 2R | 10886210..10886376 | 1003..1169 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10886789..10887351 | 441..1003 | 2800 | 99.8 | Plus |
2R | 25260384 | 2R | 10886218..10886446 | 1..229 | 1145 | 100 | Plus |
2R | 25260384 | 2R | 10886519..10886732 | 228..441 | 1070 | 100 | Plus |
2R | 25260384 | 2R | 10887409..10887575 | 1003..1169 | 835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 6772610..6772838 | 1..229 | 100 | -> | Plus |
chr2R | 6772913..6773123 | 230..440 | 100 | -> | Plus |
chr2R | 6773181..6773743 | 441..1003 | 99 | -> | Plus |
chr2R | 6773802..6773966 | 1004..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..876 | 225..1100 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..876 | 225..1100 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..876 | 225..1100 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..876 | 225..1100 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..1168 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..1168 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..1168 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18004-RB | 1..1168 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10886211..10886375 | 1004..1168 | 100 | Plus | |
2R | 10885019..10885247 | 1..229 | 100 | -> | Plus |
2R | 10885322..10885532 | 230..440 | 100 | -> | Plus |
2R | 10885590..10886152 | 441..1003 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10886211..10886375 | 1004..1168 | 100 | Plus | |
2R | 10885019..10885247 | 1..229 | 100 | -> | Plus |
2R | 10885322..10885532 | 230..440 | 100 | -> | Plus |
2R | 10885590..10886152 | 441..1003 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10886211..10886375 | 1004..1168 | 100 | Plus | |
2R | 10885019..10885247 | 1..229 | 100 | -> | Plus |
2R | 10885322..10885532 | 230..440 | 100 | -> | Plus |
2R | 10885590..10886152 | 441..1003 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 6773716..6773880 | 1004..1168 | 100 | Plus | |
arm_2R | 6772524..6772752 | 1..229 | 100 | -> | Plus |
arm_2R | 6772827..6773037 | 230..440 | 100 | -> | Plus |
arm_2R | 6773095..6773657 | 441..1003 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10887410..10887574 | 1004..1168 | 100 | Plus | |
2R | 10886218..10886446 | 1..229 | 100 | -> | Plus |
2R | 10886521..10886731 | 230..440 | 100 | -> | Plus |
2R | 10886789..10887351 | 441..1003 | 99 | -> | Plus |
Translation from 224 to 1099
> AT13868.hyp MRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSSVSAGLG AGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLD RLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRRKHKDKG APGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQLTATVSP SQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTSATVPTT MLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18004-PB | 291 | CG18004-PB | 1..291 | 1..291 | 1499 | 100 | Plus |
CG18004-PA | 297 | CG18004-PA | 8..297 | 2..291 | 1494 | 100 | Plus |
CG18004-PD | 291 | CG18004-PD | 8..291 | 2..291 | 1443 | 97.9 | Plus |
Translation from 224 to 1099
> AT13868.pep MRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSSVSAGLG AGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLD RLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRRKHKDKG APGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQLTATVSP SQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTSATVPTT MLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13783-PA | 299 | GF13783-PA | 8..299 | 2..291 | 956 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20156-PA | 297 | GG20156-PA | 8..297 | 2..291 | 1239 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20557-PA | 313 | GH20557-PA | 8..313 | 2..291 | 671 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18004-PB | 291 | CG18004-PB | 1..291 | 1..291 | 1499 | 100 | Plus |
CG18004-PA | 297 | CG18004-PA | 8..297 | 2..291 | 1494 | 100 | Plus |
CG18004-PD | 291 | CG18004-PD | 8..291 | 2..291 | 1443 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18826-PA | 305 | GI18826-PA | 67..305 | 55..291 | 701 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20093-PA | 295 | GL20093-PA | 8..295 | 2..291 | 1001 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24928-PA | 295 | GA24928-PA | 8..295 | 2..291 | 995 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21245-PA | 297 | GM21245-PA | 8..297 | 2..291 | 1494 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10763-PA | 252 | GD10763-PA | 8..252 | 2..291 | 1198 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21854-PA | 298 | GJ21854-PA | 8..298 | 2..291 | 724 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20638-PA | 326 | GK20638-PA | 8..326 | 2..291 | 629 | 52.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12846-PA | 297 | GE12846-PA | 8..297 | 2..291 | 1215 | 94.1 | Plus |