BDGP Sequence Production Resources |
Search the DGRC for AT13922
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 139 |
Well: | 22 |
Vector: | pOTB7 |
Associated Gene/Transcript | Kr-h2-RA |
Protein status: | AT13922.pep: gold |
Preliminary Size: | 1058 |
Sequenced Size: | 1605 |
Gene | Date | Evidence |
---|---|---|
CG9159 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9159 | 2002-05-31 | Blastp of sequenced clone |
CG9159 | 2003-01-01 | Sim4 clustering to Release 3 |
Kr-h2 | 2008-04-29 | Release 5.5 accounting |
Kr-h2 | 2008-08-15 | Release 5.9 accounting |
Kr-h2 | 2008-12-18 | 5.12 accounting |
1605 bp (1605 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118281
> AT13922.complete AGAAAGCAGTGCGATACAAATCGGTGGCAGCCCTGTGTCAGTTCGTTTTT ATCGAACTAGATCAACTTTGCCCGTCCATCTCTAGTTCGCACGGGAGCCC CGACCAAACTGATACGTATTAATTTACGAGAAAAACTTGCGTTTAATTCG AAGTCACATCATATCGCAGGCTGGAACGTACCTGCTGCTAAGTAAGAGAC TGAATACTGAACGGAAAGCGAGCACGAAAGCTACTTCATCATGAGCGCAC CCACCGACCAACCACCGCGCTCCGAGGGCGCTCAGACCAACAGCTCCGAG AGATCCTCACAGCAGCAGGAGCAACCGCAGCAATCTCAATCACAGAACGT ACCGGCCAAGCTCCTGCAGCATTTTCAGACAAATCGCATAGATTCCGCGC TATGGGCACTACGTCTGCTGGTCATCTTCTTCACCGTCAGCTACGTGCTG CCCATCTTTACCTCACAACAGAGCGCATTCAGCAAGGTTATGCTGGCTAA TGCCGCCATCTCTGCCTTGCGTTTGCACCAGAGATTGCCCGCGTTCGCGT TCAGTCGGGAGTTCCTTGCTCGACTGTTTGCCGAGGACTCGTGTCATTAC ATGATGTACTCCCTGATCTTCTTCAACATCCGCCCATCGCTGCTGGTTCT GATTCCCGTGCTGCTGTACTCAGTTCTGCACGCCTCAAGCTACTCGCTTA AGCTGCTGGATCTGATTGGCCAGAACTCGTGGTGGGGTGCCCGTTTCATC ATCTCCATTGTAGAGTTTCAGGCGGCGAATATCCTGAAGGCAACTGCATT CTGCGAGATCTTCATCATGCCTTACGCCATTGTGCTGGCCTTCATGAACC ACGCTGGATTGATGACGCCCGTTATTTACTACCACTATCTGGTGATGCGC TACAGCTCGCGACGAAATCCCTATCCGCGCAACGCTTTCGCTGAGCTGCG TATAACCTTCGAGGCGCTGGCCGCCCGCTCACCGCCCGCCTTTGCCAAGA TCATCCGTGGAGGCATTGGGTTCGTCAACCGCTTGGCGCCGCAGCTACAG CCGGCTGCAGCGCAAGAGTAGACACGACAAGCAGCTAACGGAAAACAACA ATCAAATGACATATGAATAAGGCTATTTAAATACCAGTTCACTTGCATAG ATGTTCACACAGGAGATTGGGGTTCATCCGTTTTATTTGTTAGCCGAAAT TCGTTGCACCTTTTCGAAGCGAAACTAGTTGTTTTACACCAGATTGTTTC GGCATTTAAGTTTAAATTTATCTATATATTATTGTAGTTTTTTTTGAGTA CATCATCATGCTTTTTTCAACAACACACAATGTGGCAACGCACGAATTCC GCCATGGAGGATCAACGGCGCGTATTACTATATTTATATCCCAAAAACAA ATTATTTCAATTTGTTTTGCTTTAACTTATATGTTCAAAATACTGATCAA ACGAAAAACATGGACAGCTAACGCTGTTAGTAATTATTTACATATATTTT GTATGAGTGTGTAAAGATTCGAAGAACCAAACAAAGTAAAGTAAAGTTAA ATAAAACATTTTGAGAAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6072288..6073012 | 846..1570 | 3625 | 100 | Plus |
chr2L | 23010047 | chr2L | 6071463..6071727 | 197..461 | 1325 | 100 | Plus |
chr2L | 23010047 | chr2L | 6071785..6072034 | 462..711 | 1250 | 100 | Plus |
chr2L | 23010047 | chr2L | 6070041..6070238 | 1..198 | 990 | 100 | Plus |
chr2L | 23010047 | chr2L | 6072091..6072225 | 712..846 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6073237..6073962 | 846..1571 | 3630 | 100 | Plus |
2L | 23513712 | 2L | 6072412..6072676 | 197..461 | 1325 | 100 | Plus |
2L | 23513712 | 2L | 6072734..6072983 | 462..711 | 1250 | 100 | Plus |
2L | 23513712 | 2L | 6070990..6071187 | 1..198 | 990 | 100 | Plus |
2L | 23513712 | 2L | 6073040..6073174 | 712..846 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6073237..6073962 | 846..1571 | 3630 | 100 | Plus |
2L | 23513712 | 2L | 6072412..6072676 | 197..461 | 1325 | 100 | Plus |
2L | 23513712 | 2L | 6072734..6072983 | 462..711 | 1250 | 100 | Plus |
2L | 23513712 | 2L | 6070990..6071187 | 1..198 | 990 | 100 | Plus |
2L | 23513712 | 2L | 6073040..6073174 | 712..846 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 53..139 | 1254..1341 | 113 | 63.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6070041..6070238 | 1..198 | 100 | -> | Plus |
chr2L | 6071465..6071727 | 199..461 | 100 | -> | Plus |
chr2L | 6071785..6072034 | 462..711 | 100 | -> | Plus |
chr2L | 6072091..6072224 | 712..845 | 100 | -> | Plus |
chr2L | 6072288..6073012 | 846..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..831 | 241..1071 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RB | 1..831 | 241..1071 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..831 | 241..1071 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..831 | 241..1071 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..831 | 241..1071 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 2..1571 | 1..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..1570 | 1..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..1570 | 1..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 2..1571 | 1..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kr-h2-RA | 1..1570 | 1..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6072414..6072676 | 199..461 | 100 | -> | Plus |
2L | 6072734..6072983 | 462..711 | 100 | -> | Plus |
2L | 6073040..6073173 | 712..845 | 100 | -> | Plus |
2L | 6070990..6071187 | 1..198 | 100 | -> | Plus |
2L | 6073237..6073961 | 846..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6072414..6072676 | 199..461 | 100 | -> | Plus |
2L | 6072734..6072983 | 462..711 | 100 | -> | Plus |
2L | 6073040..6073173 | 712..845 | 100 | -> | Plus |
2L | 6070990..6071187 | 1..198 | 100 | -> | Plus |
2L | 6073237..6073961 | 846..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6072414..6072676 | 199..461 | 100 | -> | Plus |
2L | 6072734..6072983 | 462..711 | 100 | -> | Plus |
2L | 6073040..6073173 | 712..845 | 100 | -> | Plus |
2L | 6070990..6071187 | 1..198 | 100 | -> | Plus |
2L | 6073237..6073961 | 846..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6070990..6071187 | 1..198 | 100 | -> | Plus |
arm_2L | 6072414..6072676 | 199..461 | 100 | -> | Plus |
arm_2L | 6072734..6072983 | 462..711 | 100 | -> | Plus |
arm_2L | 6073040..6073173 | 712..845 | 100 | -> | Plus |
arm_2L | 6073237..6073961 | 846..1570 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6072414..6072676 | 199..461 | 100 | -> | Plus |
2L | 6072734..6072983 | 462..711 | 100 | -> | Plus |
2L | 6073040..6073173 | 712..845 | 100 | -> | Plus |
2L | 6073237..6073961 | 846..1570 | 100 | Plus | |
2L | 6070990..6071187 | 1..198 | 100 | -> | Plus |
Translation from 240 to 1070
> AT13922.pep MSAPTDQPPRSEGAQTNSSERSSQQQEQPQQSQSQNVPAKLLQHFQTNRI DSALWALRLLVIFFTVSYVLPIFTSQQSAFSKVMLANAAISALRLHQRLP AFAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIPVLLYSVLHASS YSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMPYAIVLA FMNHAGLMTPVIYYHYLVMRYSSRRNPYPRNAFAELRITFEALAARSPPA FAKIIRGGIGFVNRLAPQLQPAAAQE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14503-PA | 277 | GF14503-PA | 1..266 | 1..265 | 1141 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23928-PA | 276 | GG23928-PA | 1..265 | 1..265 | 1252 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10802-PA | 292 | GH10802-PA | 53..281 | 36..264 | 1103 | 90 | Plus |
Dgri\GH24936-PA | 593 | GH24936-PA | 1..46 | 121..166 | 178 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Kr-h2-PC | 276 | CG9159-PC | 1..276 | 1..276 | 1396 | 100 | Plus |
Kr-h2-PB | 276 | CG9159-PB | 1..276 | 1..276 | 1396 | 100 | Plus |
Kr-h2-PA | 276 | CG9159-PA | 1..276 | 1..276 | 1396 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17312-PA | 285 | GI17312-PA | 46..275 | 36..265 | 1070 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19063-PA | 279 | GL19063-PA | 1..279 | 1..275 | 1092 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21582-PA | 279 | GA21582-PA | 1..279 | 1..275 | 1092 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18601-PA | 276 | GM18601-PA | 1..276 | 1..276 | 1409 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23385-PA | 276 | GD23385-PA | 1..276 | 1..276 | 1409 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15800-PA | 293 | GJ15800-PA | 54..283 | 36..265 | 1101 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14725-PA | 282 | GK14725-PA | 1..272 | 1..265 | 1127 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25910-PA | 276 | GE25910-PA | 1..265 | 1..265 | 1252 | 95.1 | Plus |
Translation from 240 to 1070
> AT13922.hyp MSAPTDQPPRSEGAQTNSSERSSQQQEQPQQSQSQNVPAKLLQHFQTNRI DSALWALRLLVIFFTVSYVLPIFTSQQSAFSKVMLANAAISALRLHQRLP AFAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIPVLLYSVLHASS YSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMPYAIVLA FMNHAGLMTPVIYYHYLVMRYSSRRNPYPRNAFAELRITFEALAARSPPA FAKIIRGGIGFVNRLAPQLQPAAAQE*