BDGP Sequence Production Resources |
Search the DGRC for AT13927
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 139 |
Well: | 27 |
Vector: | pOTB7 |
Associated Gene/Transcript | Trp1-RC |
Protein status: | AT13927.pep: gold |
Sequenced Size: | 1529 |
Gene | Date | Evidence |
---|---|---|
Trp1-RB | 2009-06-22 | Replacement based on scoring |
1529 bp assembled on 2009-08-05
GenBank Submission: BT089033.1
> AT13927.complete ATGCAACACGTCACGGCTAAGAAAAACTACAACCGCTTCTGGAATAGTTG TTTCTATTTATATAGTTCGCAGTTTTTAAGTTACGCATATTAATTCTCGT AATGAGTGGAGAGGAGGAGTACTTCCAGGAGGAGGAAGAAGAGGAGCAGG AGCAGGATATTTACGACGATGGCACGGAATACACCGAACCGGGTGCCCAG AAGGTAGACAAGCCGTCAAAGGACGAGAAGAACGTGGCCAAGTGGCTGAA GAAGAACGTTAAGACGAAGAAGACCAAATTCCTGAGCCACATCGTCGAAT ACTTCACCTCCAGCAAGGCCATCGATGCTCTGCTAAAGTCCAAATTCACC GAAGGCAGCAATCCGCTTTTCACCACCCGGGAGCAGGTAATCGAGTTTCT AGACGTGATGCTGGAGCACAAGTTCTTCCATCGCGCCAAGAAGGTGCCCG TCACTCTGGAGGAGATCAGAGGAAAGTCTGGAGGCGACAAGAAGGCGGAC AAGGAGAAGACCCAAGATAAGGAAAAGGACAAGGCAAAGGATGAGAAGAA GGATACCGATCCGGAAGGCGATAATGGCCAAGGAGACGGAGGTGCGTCTG GCAACGAAAAAGAGAAGGAGAAAAAGGAGAAGAAAAAGCGCAAGATCCGC CTGGACATGCATCCTGAGCAGATCTTCGTGGACGGCTCCGAGGCATACGT CTGGATCTACGATCCCATACCGCTCCACTACTGGATATTCGGCTTCATCC TGCTACTTGGCGCCGTTGGCATTTGCCTATTCCCTCTGTGGCCTCCACTG CTACGCAAGGGTGTCTACTACTTGTCCATTGCGGCTGCCGGCTTCCTTGT TTTCATCCTGGCTCTGACAATTGTACGTCTAATTGTGTTCATCATCGTGT GGGCATTAACCGGCGGCAAGTTGCACTTCTGGATCTTCCCCAACCTGACT GAGGATGTGAGCTTCTTCGCCTCCTTCTGGCCACTATATGAGAGTAACTA TAACAGTGACCCAAATAATTCGTCCGCCAAGACCGACAAGAAATCGAAAT CGAAGGACAAGAAGAAGGAAAAAGAAAGCGATGCCGAGGACACAGCCGTG GATGCGGATGGAGACGCTGACGGTGATGTGGATGCTGAGGTTTCCACGCT TGAACCAGAGAAAATCGAGCTCATCAAAGAACATGACACCGACATGGAGA TCCGCAAACGTCGCAAAGTGGGTGCCGATGACTACGAGGAAGACGATGTG GATGAAGAAGAAACGAAGGCGCAGCCCAAGGATTCCAAAGCTGGGTAAGA CGGAACCGCTCAGTAATGACCAGGATTCCTGCTTTATTGCTCGAATTTGT ATTTATAATTTCTTTTATTTCCGTCGAACTTTTGGTTGTATGTTTTTCAT ACAGTAAATCATATTGAATAGCGCAAAAGACATACATTAACTTTAGCTTT TAATTGTAAATCCTTTGTTCCTTAATAAATATTATTGTATAATTAAAATA CATTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10009701..10010517 | 176..992 | 4085 | 100 | Plus |
chr2L | 23010047 | chr2L | 10010570..10011083 | 991..1504 | 2555 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 10009347..10009523 | 1..177 | 885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10010736..10011552 | 176..992 | 4085 | 100 | Plus |
2L | 23513712 | 2L | 10011605..10012120 | 991..1506 | 2535 | 99.4 | Plus |
2L | 23513712 | 2L | 10010382..10010558 | 1..177 | 885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10010736..10011552 | 176..992 | 4085 | 100 | Plus |
2L | 23513712 | 2L | 10011605..10012120 | 991..1506 | 2535 | 99.4 | Plus |
2L | 23513712 | 2L | 10010382..10010558 | 1..177 | 885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 6452..6494 | 1036..1077 | 113 | 76.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10009702..10010010 | 177..485 | 100 | == | Plus |
chr2L | 10010164..10010517 | 639..992 | 100 | -> | Plus |
chr2L | 10010572..10011045 | 993..1466 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RB | 1..1197 | 102..1302 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RB | 1..1197 | 102..1302 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RC | 1..1197 | 102..1298 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RC | 1..1197 | 102..1298 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RB | 23..1320 | 1..1302 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RB | 23..1320 | 1..1302 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RC | 29..1532 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trp1-RC | 29..1532 | 1..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10010382..10010557 | 1..176 | 100 | -> | Plus |
2L | 10010737..10011552 | 177..992 | 100 | -> | Plus |
2L | 10011607..10012118 | 993..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10010382..10010557 | 1..176 | 100 | -> | Plus |
2L | 10010737..10011552 | 177..992 | 100 | -> | Plus |
2L | 10011607..10012118 | 993..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10010382..10010557 | 1..176 | 100 | -> | Plus |
2L | 10010737..10011552 | 177..992 | 100 | -> | Plus |
2L | 10011607..10012118 | 993..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10010737..10011552 | 177..992 | 100 | -> | Plus |
arm_2L | 10010382..10010557 | 1..176 | 100 | -> | Plus |
arm_2L | 10011607..10012118 | 993..1504 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10010737..10011552 | 177..992 | 100 | -> | Plus |
2L | 10011607..10012118 | 993..1504 | 99 | Plus | |
2L | 10010382..10010557 | 1..176 | 100 | -> | Plus |
Translation from 101 to 1297
> AT13927.pep MSGEEEYFQEEEEEEQEQDIYDDGTEYTEPGAQKVDKPSKDEKNVAKWLK KNVKTKKTKFLSHIVEYFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL DVMLEHKFFHRAKKVPVTLEEIRGKSGGDKKADKEKTQDKEKDKAKDEKK DTDPEGDNGQGDGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYV WIYDPIPLHYWIFGFILLLGAVGICLFPLWPPLLRKGVYYLSIAAAGFLV FILALTIVRLIVFIIVWALTGGKLHFWIFPNLTEDVSFFASFWPLYESNY NSDPNNSSAKTDKKSKSKDKKKEKESDAEDTAVDADGDADGDVDAEVSTL EPEKIELIKEHDTDMEIRKRRKVGADDYEEDDVDEEETKAQPKDSKAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15737-PA | 422 | GF15737-PA | 18..392 | 22..398 | 1352 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10077-PA | 423 | GG10077-PA | 13..393 | 26..398 | 1392 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11069-PA | 453 | GH11069-PA | 24..423 | 21..398 | 1184 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trp1-PC | 398 | CG4758-PC | 1..398 | 1..398 | 2088 | 100 | Plus |
Trp1-PB | 428 | CG4758-PB | 1..398 | 1..398 | 2088 | 100 | Plus |
Trp1-PD | 385 | CG4758-PD | 13..385 | 26..398 | 1955 | 100 | Plus |
Trp1-PA | 415 | CG4758-PA | 13..385 | 26..398 | 1955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17586-PA | 427 | GI17586-PA | 13..397 | 26..398 | 1210 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18954-PA | 413 | GL18954-PA | 1..383 | 1..398 | 1350 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18410-PA | 413 | GA18410-PA | 1..383 | 1..398 | 1350 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17862-PA | 409 | GM17862-PA | 17..379 | 19..398 | 1337 | 89.3 | Plus |
Dsec\GM18782-PA | 268 | GM18782-PA | 1..268 | 1..268 | 1323 | 95.2 | Plus |
Dsec\GM11063-PA | 326 | GM11063-PA | 2..296 | 106..398 | 1066 | 92.2 | Plus |
Dsec\GM11065-PA | 256 | GM11065-PA | 2..256 | 106..398 | 787 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23649-PA | 447 | GD23649-PA | 36..417 | 19..398 | 1464 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17928-PA | 438 | GJ17928-PA | 13..408 | 26..398 | 1188 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12718-PA | 427 | GK12718-PA | 13..397 | 26..398 | 1291 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18890-PA | 417 | GE18890-PA | 13..387 | 26..398 | 1870 | 95.7 | Plus |
Translation from 101 to 1297
> AT13927.hyp MSGEEEYFQEEEEEEQEQDIYDDGTEYTEPGAQKVDKPSKDEKNVAKWLK KNVKTKKTKFLSHIVEYFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL DVMLEHKFFHRAKKVPVTLEEIRGKSGGDKKADKEKTQDKEKDKAKDEKK DTDPEGDNGQGDGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYV WIYDPIPLHYWIFGFILLLGAVGICLFPLWPPLLRKGVYYLSIAAAGFLV FILALTIVRLIVFIIVWALTGGKLHFWIFPNLTEDVSFFASFWPLYESNY NSDPNNSSAKTDKKSKSKDKKKEKESDAEDTAVDADGDADGDVDAEVSTL EPEKIELIKEHDTDMEIRKRRKVGADDYEEDDVDEEETKAQPKDSKAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trp1-PC | 398 | CG4758-PC | 1..398 | 1..398 | 2088 | 100 | Plus |
Trp1-PB | 428 | CG4758-PB | 1..398 | 1..398 | 2088 | 100 | Plus |
Trp1-PD | 385 | CG4758-PD | 13..385 | 26..398 | 1955 | 100 | Plus |
Trp1-PA | 415 | CG4758-PA | 13..385 | 26..398 | 1955 | 100 | Plus |