Clone AT13932 Report

Search the DGRC for AT13932

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:139
Well:32
Vector:pOTB7
Associated Gene/TranscriptCG30461-RI
Protein status:AT13932.pep: gold
Sequenced Size:929

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9010 2002-01-01 Sim4 clustering to Release 2
CG33142 2002-05-31 Blastp of sequenced clone
CG33142 2003-01-01 Sim4 clustering to Release 3
CG30461 2008-04-29 Release 5.5 accounting
CG30461 2008-08-15 Release 5.9 accounting
CG9002 2008-08-15 Release 5.9 accounting
CG30461 2008-12-18 5.12 accounting
CG9002 2008-12-18 5.12 accounting

Clone Sequence Records

AT13932.complete Sequence

929 bp (929 high quality bases) assembled on 2002-05-31

GenBank Submission: AY118282

> AT13932.complete
CCGACCTATACATTCGTTTGATTTTGTACGTTTTTCGAGATATCCTGTAA
AATTGACCGTGTTACCATGACTCGAAAACAAATTGCTACGCCCCGCTGTG
AAACTATCTCCAAATTGGTGGTCAGCGTCGGCAGTGGCGAAACTTTTCTT
ACTTATGCAGATGCTACAACACGATCCTTCTGCGCGAATCCCTCGTGGCT
GAACTTTCAAAATGGCATGATGGAAGTGGGGCCGATTAGTAAACCGAATC
CCCATGATTCTCAAAAGGAGGCAACCTCATTTCTGGAGCGACATTTCGGA
AGCAAGCGTCTGGACTCCGAGCAAATGAACGCGGAATTTAAGAACAGGAA
GACGATTATCTGGCACACTTGGCTGGTGGAGAAGGTGCGGTTTCCTCCAG
CTCAGTGTGCGGTCATCAAGGAATGGAAGGATCCAATCACGGAGACTCTG
GGCATTTGCTATTGTTCCTGGCACTTGCAGAGCTGCATGGCCTGGCAGCT
TATTCTCAGTAATCGAATGACGGATGCCAAGTGCTTCTGTTCGCGAATCA
AGAAAACGATGGACATTGTCAACTGTCTCGTTGACTCGGAAGTGGAACAG
GAGAAAACATTTAAGGATTGTTCTTCCCCCTTAGCCGTGTTAACCGAGAA
AGTGCTTGATGCCACTGATATGCTGAAGAAACTGAATGATCTTCTAGAGC
TCCAGGAGAAACTCAATCGGAAATACAAACGCCTGTGTGTATAGAAAAAA
AAATAAGGAAATCAAAAGACTACTTTTGGAGTGCTGACCCCTTGATGTCT
GCATAGATTGTATTGTATTTATTTTATTAAAACATTTCTGCTGTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

AT13932.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG30461-RD 846 CG30461-RD 1..845 1..845 4195 99.7 Plus
CG30461-RC 823 CG30461-RC 138..822 161..845 3395 99.7 Plus
ste24c-RA 2226 ste24c-RA 1544..2226 160..842 3385 99.7 Plus
ste24c-RA 2226 ste24c-RA 1408..1544 1..137 685 100 Plus
CG30461-RC 823 CG30461-RC 5..137 1..133 665 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12883585..12883981 533..137 1970 99.7 Minus
chr2R 21145070 chr2R 12883220..12883531 844..533 1560 100 Minus
chr2R 21145070 chr2R 12884221..12884357 137..1 685 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:48:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16996356..16996752 533..137 1955 99.5 Minus
2R 25286936 2R 16995990..16996302 845..533 1565 100 Minus
2R 25286936 2R 16996992..16997128 137..1 685 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16997555..16997951 533..137 1955 99.4 Minus
2R 25260384 2R 16997189..16997501 845..533 1565 100 Minus
2R 25260384 2R 16998191..16998327 137..1 685 100 Minus
Blast to na_te.dros performed on 2019-03-16 22:26:11 has no hits.

AT13932.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:27:08 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12883220..12883530 534..844 100 <- Minus
chr2R 12883585..12883980 138..533 99 <- Minus
chr2R 12884221..12884357 1..137 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:08 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..678 67..744 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:34:37 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..678 67..744 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:26:13 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..678 67..744 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:39:20 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RI 1..678 67..744 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:05:53 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..844 1..844 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:34:37 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..844 1..844 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:05 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
ste24c-RC 1408..2251 1..844 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:26:13 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RD 1..844 1..844 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:39:20 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
CG30461-RI 18..861 1..844 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16996992..16997128 1..137 100   Minus
2R 16995991..16996301 534..844 100 <- Minus
2R 16996356..16996751 138..533 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16996992..16997128 1..137 100   Minus
2R 16995991..16996301 534..844 100 <- Minus
2R 16996356..16996751 138..533 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16996992..16997128 1..137 100   Minus
2R 16995991..16996301 534..844 100 <- Minus
2R 16996356..16996751 138..533 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:05 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12883496..12883806 534..844 100 <- Minus
arm_2R 12883861..12884256 138..533 99 <- Minus
arm_2R 12884497..12884633 1..137 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:05 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12883496..12883806 534..844 100 <- Minus
arm_2R 12883861..12884256 138..533 99 <- Minus
arm_2R 12884497..12884633 1..137 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:58:39 Download gff for AT13932.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16997190..16997500 534..844 100 <- Minus
2R 16997555..16997950 138..533 99 <- Minus
2R 16998191..16998327 1..137 100   Minus

AT13932.hyp Sequence

Translation from 66 to 743

> AT13932.hyp
MTRKQIATPRCETISKLVVSVGSGETFLTYADATTRSFCANPSWLNFQNG
MMEVGPISKPNPHDSQKEATSFLERHFGSKRLDSEQMNAEFKNRKTIIWH
TWLVEKVRFPPAQCAVIKEWKDPITETLGICYCSWHLQSCMAWQLILSNR
MTDAKCFCSRIKKTMDIVNCLVDSEVEQEKTFKDCSSPLAVLTEKVLDAT
DMLKKLNDLLELQEKLNRKYKRLCV*

AT13932.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG30461-PJ 225 CG30461-PJ 1..225 1..225 1203 100 Plus
CG30461-PI 225 CG30461-PI 1..225 1..225 1203 100 Plus
CG30461-PK 175 CG30461-PK 1..175 51..225 940 100 Plus

AT13932.pep Sequence

Translation from 66 to 743

> AT13932.pep
MTRKQIATPRCETISKLVVSVGSGETFLTYADATTRSFCANPSWLNFQNG
MMEVGPISKPNPHDSQKEATSFLERHFGSKRLDSEQMNAEFKNRKTIIWH
TWLVEKVRFPPAQCAVIKEWKDPITETLGICYCSWHLQSCMAWQLILSNR
MTDAKCFCSRIKKTMDIVNCLVDSEVEQEKTFKDCSSPLAVLTEKVLDAT
DMLKKLNDLLELQEKLNRKYKRLCV*

AT13932.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13437-PA 240 GF13437-PA 1..238 1..221 547 45 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:12:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22231-PA 230 GG22231-PA 1..228 1..223 976 79.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:12:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22832-PA 287 GH22832-PA 3..184 11..178 157 29.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG30461-PJ 225 CG30461-PJ 1..225 1..225 1203 100 Plus
CG30461-PI 225 CG30461-PI 1..225 1..225 1203 100 Plus
CG30461-PK 175 CG30461-PK 1..175 51..225 940 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10494-PA 231 GL10494-PA 7..218 14..218 350 39.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24389-PA 231 GA24389-PA 7..218 14..218 342 37.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20019-PA 227 GM20019-PA 1..225 1..225 1141 93.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25505-PA 264 GD25505-PA 103..264 64..225 794 90.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:12:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19572-PA 175 GK19572-PA 14..159 69..217 196 35.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:12:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14228-PA 230 GE14228-PA 1..228 1..223 1007 81.6 Plus