AT13932.complete Sequence
929 bp (929 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118282
> AT13932.complete
CCGACCTATACATTCGTTTGATTTTGTACGTTTTTCGAGATATCCTGTAA
AATTGACCGTGTTACCATGACTCGAAAACAAATTGCTACGCCCCGCTGTG
AAACTATCTCCAAATTGGTGGTCAGCGTCGGCAGTGGCGAAACTTTTCTT
ACTTATGCAGATGCTACAACACGATCCTTCTGCGCGAATCCCTCGTGGCT
GAACTTTCAAAATGGCATGATGGAAGTGGGGCCGATTAGTAAACCGAATC
CCCATGATTCTCAAAAGGAGGCAACCTCATTTCTGGAGCGACATTTCGGA
AGCAAGCGTCTGGACTCCGAGCAAATGAACGCGGAATTTAAGAACAGGAA
GACGATTATCTGGCACACTTGGCTGGTGGAGAAGGTGCGGTTTCCTCCAG
CTCAGTGTGCGGTCATCAAGGAATGGAAGGATCCAATCACGGAGACTCTG
GGCATTTGCTATTGTTCCTGGCACTTGCAGAGCTGCATGGCCTGGCAGCT
TATTCTCAGTAATCGAATGACGGATGCCAAGTGCTTCTGTTCGCGAATCA
AGAAAACGATGGACATTGTCAACTGTCTCGTTGACTCGGAAGTGGAACAG
GAGAAAACATTTAAGGATTGTTCTTCCCCCTTAGCCGTGTTAACCGAGAA
AGTGCTTGATGCCACTGATATGCTGAAGAAACTGAATGATCTTCTAGAGC
TCCAGGAGAAACTCAATCGGAAATACAAACGCCTGTGTGTATAGAAAAAA
AAATAAGGAAATCAAAAGACTACTTTTGGAGTGCTGACCCCTTGATGTCT
GCATAGATTGTATTGTATTTATTTTATTAAAACATTTCTGCTGTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AT13932.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:56:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30461-RD | 846 | CG30461-RD | 1..845 | 1..845 | 4195 | 99.7 | Plus |
CG30461-RC | 823 | CG30461-RC | 138..822 | 161..845 | 3395 | 99.7 | Plus |
ste24c-RA | 2226 | ste24c-RA | 1544..2226 | 160..842 | 3385 | 99.7 | Plus |
ste24c-RA | 2226 | ste24c-RA | 1408..1544 | 1..137 | 685 | 100 | Plus |
CG30461-RC | 823 | CG30461-RC | 5..137 | 1..133 | 665 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:26:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 12883585..12883981 | 533..137 | 1970 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 12883220..12883531 | 844..533 | 1560 | 100 | Minus |
chr2R | 21145070 | chr2R | 12884221..12884357 | 137..1 | 685 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:48:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:26:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16996356..16996752 | 533..137 | 1955 | 99.5 | Minus |
2R | 25286936 | 2R | 16995990..16996302 | 845..533 | 1565 | 100 | Minus |
2R | 25286936 | 2R | 16996992..16997128 | 137..1 | 685 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:28:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 16997555..16997951 | 533..137 | 1955 | 99.4 | Minus |
2R | 25260384 | 2R | 16997189..16997501 | 845..533 | 1565 | 100 | Minus |
2R | 25260384 | 2R | 16998191..16998327 | 137..1 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 22:26:11 has no hits.
AT13932.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:27:08 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 12883220..12883530 | 534..844 | 100 | <- | Minus |
chr2R | 12883585..12883980 | 138..533 | 99 | <- | Minus |
chr2R | 12884221..12884357 | 1..137 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:08 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..678 | 67..744 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:34:37 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..678 | 67..744 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:26:13 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..678 | 67..744 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:39:20 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RI | 1..678 | 67..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:05:53 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..844 | 1..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:34:37 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..844 | 1..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:05 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ste24c-RC | 1408..2251 | 1..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:26:13 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RD | 1..844 | 1..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:39:20 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30461-RI | 18..861 | 1..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16996992..16997128 | 1..137 | 100 | | Minus |
2R | 16995991..16996301 | 534..844 | 100 | <- | Minus |
2R | 16996356..16996751 | 138..533 | 99 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16996992..16997128 | 1..137 | 100 | | Minus |
2R | 16995991..16996301 | 534..844 | 100 | <- | Minus |
2R | 16996356..16996751 | 138..533 | 99 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:27:08 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16996992..16997128 | 1..137 | 100 | | Minus |
2R | 16995991..16996301 | 534..844 | 100 | <- | Minus |
2R | 16996356..16996751 | 138..533 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:05 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12883496..12883806 | 534..844 | 100 | <- | Minus |
arm_2R | 12883861..12884256 | 138..533 | 99 | <- | Minus |
arm_2R | 12884497..12884633 | 1..137 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:05 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12883496..12883806 | 534..844 | 100 | <- | Minus |
arm_2R | 12883861..12884256 | 138..533 | 99 | <- | Minus |
arm_2R | 12884497..12884633 | 1..137 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:58:39 Download gff for
AT13932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16997190..16997500 | 534..844 | 100 | <- | Minus |
2R | 16997555..16997950 | 138..533 | 99 | <- | Minus |
2R | 16998191..16998327 | 1..137 | 100 | | Minus |
AT13932.hyp Sequence
Translation from 66 to 743
> AT13932.hyp
MTRKQIATPRCETISKLVVSVGSGETFLTYADATTRSFCANPSWLNFQNG
MMEVGPISKPNPHDSQKEATSFLERHFGSKRLDSEQMNAEFKNRKTIIWH
TWLVEKVRFPPAQCAVIKEWKDPITETLGICYCSWHLQSCMAWQLILSNR
MTDAKCFCSRIKKTMDIVNCLVDSEVEQEKTFKDCSSPLAVLTEKVLDAT
DMLKKLNDLLELQEKLNRKYKRLCV*
AT13932.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:10:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30461-PJ | 225 | CG30461-PJ | 1..225 | 1..225 | 1203 | 100 | Plus |
CG30461-PI | 225 | CG30461-PI | 1..225 | 1..225 | 1203 | 100 | Plus |
CG30461-PK | 175 | CG30461-PK | 1..175 | 51..225 | 940 | 100 | Plus |
AT13932.pep Sequence
Translation from 66 to 743
> AT13932.pep
MTRKQIATPRCETISKLVVSVGSGETFLTYADATTRSFCANPSWLNFQNG
MMEVGPISKPNPHDSQKEATSFLERHFGSKRLDSEQMNAEFKNRKTIIWH
TWLVEKVRFPPAQCAVIKEWKDPITETLGICYCSWHLQSCMAWQLILSNR
MTDAKCFCSRIKKTMDIVNCLVDSEVEQEKTFKDCSSPLAVLTEKVLDAT
DMLKKLNDLLELQEKLNRKYKRLCV*
AT13932.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13437-PA | 240 | GF13437-PA | 1..238 | 1..221 | 547 | 45 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:12:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22231-PA | 230 | GG22231-PA | 1..228 | 1..223 | 976 | 79.4 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:12:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH22832-PA | 287 | GH22832-PA | 3..184 | 11..178 | 157 | 29.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:26:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30461-PJ | 225 | CG30461-PJ | 1..225 | 1..225 | 1203 | 100 | Plus |
CG30461-PI | 225 | CG30461-PI | 1..225 | 1..225 | 1203 | 100 | Plus |
CG30461-PK | 175 | CG30461-PK | 1..175 | 51..225 | 940 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL10494-PA | 231 | GL10494-PA | 7..218 | 14..218 | 350 | 39.5 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24389-PA | 231 | GA24389-PA | 7..218 | 14..218 | 342 | 37.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:12:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20019-PA | 227 | GM20019-PA | 1..225 | 1..225 | 1141 | 93.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:12:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25505-PA | 264 | GD25505-PA | 103..264 | 64..225 | 794 | 90.7 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19572-PA | 175 | GK19572-PA | 14..159 | 69..217 | 196 | 35.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14228-PA | 230 | GE14228-PA | 1..228 | 1..223 | 1007 | 81.6 | Plus |