BDGP Sequence Production Resources |
Search the DGRC for AT13969
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 139 |
Well: | 69 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG9376-RA |
Protein status: | AT13969.pep: gold |
Preliminary Size: | 630 |
Sequenced Size: | 970 |
Gene | Date | Evidence |
---|---|---|
CG9376 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9376 | 2002-06-10 | Blastp of sequenced clone |
CG9376 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9376 | 2008-04-29 | Release 5.5 accounting |
CG9376 | 2008-08-15 | Release 5.9 accounting |
CG9376 | 2008-12-18 | 5.12 accounting |
970 bp (970 high quality bases) assembled on 2002-06-10
GenBank Submission: AY070790
> AT13969.complete CTGCATTTAATCATGGTTTCCCGATTCGACCAACAAAAGACCAAGCACCA GCTCTTCCACGTGTCCCTCAGCCTCGCCACCATCCTGATCTGCATGGCGT ACATGCAGTATCGCCGGAATTGGGCACATCTCGGCAGCTTCTGGGATTCT CTTGTCGTCCCTATTGTTTTCCTCGGAGAGCTGCTAAAAGTTGTTTTGGC TCGCTTCTACGGGAAGGTTGAGGATGGCGTCCTAACCGCCAAACAGCGCC AGAAAAAGAACTCGTACTTTACGCCGCGGGAGCTCCTCGGAGGATTCACC CTGCAGTTCCTGTGTACACTCCTCTACGCCTTTATCTGCATAATTTTGGG AGCCCCGGTGCTGGGCAACTATGAGCAGACCTTCGTCTTGGCCTTACTGA TGACCTTGTTGACGGTGTCACCCACGGTTTTCCTCCTCGGTGGCGGAGGA GCACTACAAGTGTGCTTCTGCGAGAAACCGGACTTTGTGACCAAGTGCGA GGACACGGCTCTGAATCTGTTCAAGTACAATGCACTGGGCGGTATTCTGG GAGCTTGGGCCGGGAGCGTGGTCGCTCCACTAGACTGGGGACGTGACTGG CAGGCTTATCCCATTCCCAACGTGATCGGAGCACTGCTGGGAAGCGCTCT GGGCAATATATACGCTTGTACGCATGTCCTCTACGCCACAGCTCGAGTTT ACATGACCAAGAAACGCACTTAAATCTAATAATAAAACTCTTCATTCTGC CACCAAGATTATTACGTTGCGCTGCCACTGAAATCCACTCATCCACTAAG AACCACGTCATCATCCCGTCTAGTCAGCAGCTTAGGAACTACCAAAAAGC AATTACCACTTTAATGTTACATGTTTAATCATATTACTAGCGTGTATTAT TAATGAATTCTTTTTAAATCAATCAATAATAAACTAACAAATTATGAATT TAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19601920..19602870 | 1..951 | 4755 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19612539..19613491 | 1..953 | 4750 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19605639..19606591 | 1..953 | 4750 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 4697..4751 | 898..951 | 128 | 72.7 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1062..1106 | 872..916 | 117 | 73.3 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8944..8988 | 872..916 | 117 | 73.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19601920..19602870 | 1..951 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..711 | 13..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..711 | 13..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..711 | 13..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..711 | 13..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..711 | 13..723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..951 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 80..1030 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 85..1035 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 1..951 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9376-RA | 85..1035 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19612539..19613489 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19612539..19613489 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19612539..19613489 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19605639..19606589 | 1..951 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19605639..19606589 | 1..951 | 99 | Plus |
Translation from 1 to 722
> AT13969.hyp LHLIMVSRFDQQKTKHQLFHVSLSLATILICMAYMQYRRNWAHLGSFWDS LVVPIVFLGELLKVVLARFYGKVEDGVLTAKQRQKKNSYFTPRELLGGFT LQFLCTLLYAFICIILGAPVLGNYEQTFVLALLMTLLTVSPTVFLLGGGG ALQVCFCEKPDFVTKCEDTALNLFKYNALGGILGAWAGSVVAPLDWGRDW QAYPIPNVIGALLGSALGNIYACTHVLYATARVYMTKKRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9376-PA | 236 | CG9376-PA | 1..236 | 5..240 | 1241 | 100 | Plus |
Translation from 12 to 722
> AT13969.pep MVSRFDQQKTKHQLFHVSLSLATILICMAYMQYRRNWAHLGSFWDSLVVP IVFLGELLKVVLARFYGKVEDGVLTAKQRQKKNSYFTPRELLGGFTLQFL CTLLYAFICIILGAPVLGNYEQTFVLALLMTLLTVSPTVFLLGGGGALQV CFCEKPDFVTKCEDTALNLFKYNALGGILGAWAGSVVAPLDWGRDWQAYP IPNVIGALLGSALGNIYACTHVLYATARVYMTKKRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23712-PA | 236 | GF23712-PA | 1..236 | 1..236 | 1213 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16049-PA | 236 | GG16049-PA | 1..236 | 1..236 | 1246 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16941-PA | 236 | GH16941-PA | 1..235 | 1..235 | 1176 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-F-PA | 236 | CG9376-PA | 1..236 | 1..236 | 1241 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11801-PA | 236 | GI11801-PA | 1..235 | 1..235 | 1180 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20948-PA | 236 | GL20948-PA | 1..235 | 1..235 | 1170 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21741-PA | 236 | GA21741-PA | 1..235 | 1..235 | 1173 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19613-PA | 236 | GM19613-PA | 1..236 | 1..236 | 1248 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14818-PA | 236 | GD14818-PA | 1..236 | 1..236 | 1248 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13505-PA | 236 | GJ13505-PA | 1..235 | 1..235 | 1177 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19359-PA | 237 | GK19359-PA | 2..236 | 1..235 | 1174 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19615-PA | 236 | GE19615-PA | 1..236 | 1..236 | 1241 | 98.7 | Plus |