BDGP Sequence Production Resources |
Search the DGRC for AT14009
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 140 |
Well: | 9 |
Vector: | pOTB7 |
Associated Gene/Transcript | Vha13-RA |
Protein status: | AT14009.pep: gold |
Preliminary Size: | 678 |
Sequenced Size: | 740 |
Gene | Date | Evidence |
---|---|---|
CG6213 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6213 | 2002-01-11 | Blastp of sequenced clone |
CG6213 | 2003-01-01 | Sim4 clustering to Release 3 |
Vha13 | 2008-04-29 | Release 5.5 accounting |
Vha13 | 2008-08-15 | Release 5.9 accounting |
Vha13 | 2008-12-18 | 5.12 accounting |
740 bp (740 high quality bases) assembled on 2002-01-11
GenBank Submission: AY075202
> AT14009.complete GTGACTTCGTCATATGACATTTTTCATAGTTCGTCGTCGATTGTGATTCT GTCGCACTTGCTTTTTTCGACTTGCACAGTATACACCACGGCGAGGAATT AGAGAAGTTTGGAAATTATGGCCAGCCAGACGCAGGGAATCCAGCAGTTG CTCGCTGCCGAGAAAAAGGCAGCCGAGAAGGTCGCCGAGGCTCGTAAACG CAAGGCAAGGAGGTTGAAGCAAGCCAAGGACGAGGCTACCGAGGAGATCG AGAAGTTCCGCCAGGAGCGCGAGCGCGCCTTCAAGGAGTTCGAGGCCAAG CACATGGGAAGTCGCGAGGGCGTGGCGGCCAAGATCGATGCGGATATCCG CGTTAAGCTGGCCGACATGGACCGGGCCATCCAGACCCGCAAGGACCCGT TCATCCTGGAGATCCTGCAGTACGTGTACAACATCTCGCCCGAGGTGCAC AAAAACTACAACCACAAGTAAAGAGGTGGCCCCCCAAACTGTGCGCTGTA AATTCAATGTCCACGTTCAACTCTAATCCATAATTTAGACCCGTAATAAT AGTGGTTAATCTAACTGGAAACACTGCTGTATTATTATTCCATACATTAA AGTGAAAATTCGTTGTTGTTCCATGTAGAAAAAAGCGAGCATATTAGTTT GCCTCCCACTCGCGCGGGATTGTATTATCATTGTTTTGTGTTCTGCCCAA TACACGTTGTTGTTTTATCCGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha13-RA | 1098 | Vha13-RA | 138..862 | 1..725 | 3595 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15467113..15467535 | 721..299 | 2100 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 15468034..15468237 | 204..1 | 1005 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 15467593..15467693 | 300..200 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19643254..19643680 | 725..299 | 2120 | 99.8 | Minus |
3R | 32079331 | 3R | 19644201..19644404 | 204..1 | 990 | 99 | Minus |
3R | 32079331 | 3R | 19643738..19643838 | 300..200 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19384085..19384511 | 725..299 | 2120 | 99.7 | Minus |
3R | 31820162 | 3R | 19385032..19385235 | 204..1 | 990 | 99 | Minus |
3R | 31820162 | 3R | 19384569..19384669 | 300..200 | 505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15467113..15467533 | 301..721 | 99 | <- | Minus |
chr3R | 15467593..15467693 | 200..300 | 100 | <- | Minus |
chr3R | 15468039..15468237 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..354 | 118..471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..354 | 118..471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..354 | 118..471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..354 | 118..471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..354 | 118..471 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 9..729 | 1..721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..721 | 1..721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..703 | 19..721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 9..729 | 1..721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha13-RA | 1..703 | 19..721 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19643258..19643678 | 301..721 | 99 | <- | Minus |
3R | 19643738..19643838 | 200..300 | 100 | <- | Minus |
3R | 19644206..19644404 | 1..199 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19643258..19643678 | 301..721 | 99 | <- | Minus |
3R | 19643738..19643838 | 200..300 | 100 | <- | Minus |
3R | 19644206..19644404 | 1..199 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19643258..19643678 | 301..721 | 99 | <- | Minus |
3R | 19643738..19643838 | 200..300 | 100 | <- | Minus |
3R | 19644206..19644404 | 1..199 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15468980..15469400 | 301..721 | 99 | <- | Minus |
arm_3R | 15469460..15469560 | 200..300 | 100 | <- | Minus |
arm_3R | 15469928..15470126 | 1..199 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19384089..19384509 | 301..721 | 99 | <- | Minus |
3R | 19384569..19384669 | 200..300 | 100 | <- | Minus |
3R | 19385037..19385235 | 1..199 | 99 | Minus |
Translation from 117 to 470
> AT14009.hyp MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQE RERAFKEFEAKHMGSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEIL QYVYNISPEVHKNYNHK*
Translation from 117 to 470
> AT14009.pep MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQE RERAFKEFEAKHMGSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEIL QYVYNISPEVHKNYNHK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17364-PA | 117 | GF17364-PA | 1..117 | 1..117 | 565 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15897-PA | 117 | GG15897-PA | 1..117 | 1..117 | 589 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22384-PA | 118 | GH22384-PA | 1..117 | 1..117 | 540 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha13-PB | 117 | CG6213-PB | 1..117 | 1..117 | 581 | 100 | Plus |
Vha13-PA | 117 | CG6213-PA | 1..117 | 1..117 | 581 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24620-PA | 117 | GI24620-PA | 1..117 | 1..117 | 543 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11956-PA | 117 | GL11956-PA | 1..117 | 1..117 | 542 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19444-PA | 117 | GA19444-PA | 1..117 | 1..117 | 542 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26899-PA | 117 | GM26899-PA | 1..117 | 1..117 | 597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20107-PA | 117 | GD20107-PA | 1..117 | 1..117 | 597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24533-PA | 117 | GJ24533-PA | 1..117 | 1..117 | 540 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22514-PA | 117 | GK22514-PA | 1..117 | 1..117 | 558 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Vha13-PA | 117 | GE25119-PA | 1..117 | 1..117 | 589 | 99.1 | Plus |