BDGP Sequence Production Resources |
Search the DGRC for AT14053
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 140 |
Well: | 53 |
Vector: | pOTB7 |
Associated Gene/Transcript | Rpn10-RA |
Protein status: | AT14053.pep: gold |
Preliminary Size: | 1359 |
Sequenced Size: | 1456 |
Gene | Date | Evidence |
---|---|---|
CG7619 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7619 | 2003-01-22 | Blastp of sequenced clone |
Pros54 | 2008-04-29 | Release 5.5 accounting |
Pros54 | 2008-08-15 | Release 5.9 accounting |
Pros54 | 2008-12-18 | 5.12 accounting |
1456 bp (1456 high quality bases) assembled on 2003-01-22
GenBank Submission: AY089333
> AT14053.complete GCACAACGGTCATACAAATCCGATATTTTAATGCCGATAGTTCAGGCAGC ACAGCACCTGGCAACCCTGGGGAATTACAGTTCAGTGGCAAAGTGACAAG CAAAAATACGAAAATGGTTCTGGAGAGTACTATGATATGCTTTGATAACA GCGACTTCCAGCGCAACGGAGACTACTTTCCAACTCGTCTCATCGTCCAG AGAGATGGCATCAATCTGGTCTGCCTGACCAAGCTGCGTTCCAATCCCGA GAACAATGTGGGCCTGATGACTCTGTCCAACACCGTTGAAGTGCTGGCCA CTCTTACTAGCGATGCAGGACGGATTTTCTCAAAGATGCATCTGGTTCAG CCGAAGGGCGAGATAAACCTCCTGACCGGAATCCGAATTGCCCATCTGGT GCTGAAGCATCGCCAAGGCAAGAACCACAAAATGCGCATCGTGGTCTTTG TGGGCTCCCCCATCAATCACGAGGAGGGCGATCTAGTGAAGCAGGCCAAG CGCCTCAAGAAGGAGAAGGTCAACGTAGACATAGTTAGCTTCGGTGATCA TGGCAACAACAACGAGATTCTCACAGCATTCATCAACGCGCTTAATGGCA AGGACGGCACCGGCTCCCATTTGGTCAGCGTGCCTCGGGGATCAGTTTTG TCGGATGCCCTGCTGTCGTCACCCATCATTCAGGGCGAGGACGGCATGGG CGGAGCTGGCCTGGGCGGCAACGTCTTCGAATTCGGTGTAGATCCCAACG AGGACCCCGAACTGGCTCTCGCCTTGCGTGTGTCTATGGAGGAGCAACGG CAGCGCCAGGAGAGCGAGCAACGTCGCGCCAATCCCGATGGGGCTCCACC GACTGGCGGAGATGCTGGTGGCGGAGGCGGCGTTTCGGGATCTGGACCTG GAAACGAAGAAAGTGCCGGAGCAGAGAACGAAGCCAACACCGAGGAGGCC ATGCTGCAGCGTGCCCTGGCCCTGTCCACCGAAACACCCGAGGACAACTT GCCGGACTTTGCTAACATGACTGAGGAGGAACAGATTGCCTTCGCTATGC AGATGTCCATGCAGGACGCTCCCGACGACTCTGTTACCCAGCAAGCAAAG CGCCCAAAGACGGACGAGGCAAACGCTCCCATGGACGTGGACGAGGATTA CTCGGAGGTGATCGGAGACCCGGCCTTCTTGCAGAGCGTGCTGGAGAATC TGCCTGGTGTTGATCCCCAGTCGGAGGCGGTGCGCGATGCTGTCGGTTCA CTCAACAAGGACAAGGACAAAAAGAGCGACGGCAAGGACTCGCAAAAAAA ATAAACCGCATCTATGATTATATCTAATAAGCTCGTTTAAAGCATTTGTA TGCCCATTAAAATCATTTGTAGCCGTCTTTCAAATTATGCTTCAAGTGAA AATATATAAACAAATACACACGAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pros54-RA | 1606 | Pros54-RA | 1..1423 | 1..1423 | 7115 | 100 | Plus |
Pros54.a | 1452 | Pros54.a | 168..1452 | 139..1423 | 6425 | 100 | Plus |
Pros54.b | 1533 | Pros54.b | 234..1518 | 139..1423 | 6425 | 100 | Plus |
Pros54.a | 1452 | Pros54.a | 1..139 | 1..139 | 695 | 100 | Plus |
Pros54.b | 1533 | Pros54.b | 1..133 | 7..139 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21526376..21527517 | 281..1422 | 5710 | 100 | Plus |
chr3L | 24539361 | chr3L | 21526174..21526315 | 139..280 | 710 | 100 | Plus |
chr3L | 24539361 | chr3L | 21525935..21526073 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21537441..21538583 | 281..1423 | 5715 | 100 | Plus |
3L | 28110227 | 3L | 21537239..21537380 | 139..280 | 710 | 100 | Plus |
3L | 28110227 | 3L | 21537000..21537138 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21530541..21531683 | 281..1423 | 5715 | 100 | Plus |
3L | 28103327 | 3L | 21530339..21530480 | 139..280 | 710 | 100 | Plus |
3L | 28103327 | 3L | 21530100..21530238 | 1..139 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
BS4 | 754 | BS4 BS4 754bp | 589..648 | 1200..1141 | 111 | 65 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21525935..21526073 | 1..139 | 100 | -> | Plus |
chr3L | 21526175..21526315 | 140..280 | 100 | -> | Plus |
chr3L | 21526376..21527517 | 281..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1180 | 114..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1180 | 114..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn10-RA | 1..1191 | 114..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1180 | 114..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn10-RA | 1..1191 | 114..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn10-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pros54-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpn10-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21537000..21537138 | 1..139 | 100 | -> | Plus |
3L | 21537240..21537380 | 140..280 | 100 | -> | Plus |
3L | 21537441..21538582 | 281..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21537000..21537138 | 1..139 | 100 | -> | Plus |
3L | 21537240..21537380 | 140..280 | 100 | -> | Plus |
3L | 21537441..21538582 | 281..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21537000..21537138 | 1..139 | 100 | -> | Plus |
3L | 21537240..21537380 | 140..280 | 100 | -> | Plus |
3L | 21537441..21538582 | 281..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21530100..21530238 | 1..139 | 100 | -> | Plus |
arm_3L | 21530340..21530480 | 140..280 | 100 | -> | Plus |
arm_3L | 21530541..21531682 | 281..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21530541..21531682 | 281..1422 | 100 | Plus | |
3L | 21530100..21530238 | 1..139 | 100 | -> | Plus |
3L | 21530340..21530480 | 140..280 | 100 | -> | Plus |
Translation from 2 to 1303
> AT14053.hyp TTVIQIRYFNADSSGSTAPGNPGELQFSGKVTSKNTKMVLESTMICFDNS DFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLAT LTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFV GSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGK DGTGSHLVSVPRGSVLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNE DPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGDAGGGGGVSGSGPG NEESAGAENEANTEEAMLQRALALSTETPEDNLPDFANMTEEEQIAFAMQ MSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQSVLENL PGVDPQSEAVRDAVGSLNKDKDKKSDGKDSQKK*
Translation from 113 to 1303
> AT14053.pep MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVG LMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHR QGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNN EILTAFINALNGKDGTGSHLVSVPRGSVLSDALLSSPIIQGEDGMGGAGL GGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGD AGGGGGVSGSGPGNEESAGAENEANTEEAMLQRALALSTETPEDNLPDFA NMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVI GDPAFLQSVLENLPGVDPQSEAVRDAVGSLNKDKDKKSDGKDSQKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23724-PA | 392 | GF23724-PA | 1..392 | 1..396 | 1787 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16198-PA | 396 | GG16198-PA | 1..396 | 1..396 | 2035 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16741-PA | 394 | GH16741-PA | 1..394 | 1..396 | 1677 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpn10-PB | 396 | CG7619-PB | 1..396 | 1..396 | 2026 | 100 | Plus |
Rpn10-PA | 396 | CG7619-PA | 1..396 | 1..396 | 2026 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13465-PA | 393 | GI13465-PA | 1..393 | 1..396 | 1697 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11890-PA | 391 | GL11890-PA | 1..391 | 1..396 | 1738 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20484-PA | 391 | GA20484-PA | 1..391 | 1..396 | 1736 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22380-PA | 396 | GM22380-PA | 1..396 | 1..396 | 2046 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14970-PA | 393 | GD14970-PA | 1..393 | 1..396 | 2018 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11829-PA | 391 | GJ11829-PA | 1..391 | 1..396 | 1674 | 88.2 | Plus |