Clone AT14053 Report

Search the DGRC for AT14053

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:140
Well:53
Vector:pOTB7
Associated Gene/TranscriptRpn10-RA
Protein status:AT14053.pep: gold
Preliminary Size:1359
Sequenced Size:1456

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7619 2002-01-01 Sim4 clustering to Release 2
CG7619 2003-01-22 Blastp of sequenced clone
Pros54 2008-04-29 Release 5.5 accounting
Pros54 2008-08-15 Release 5.9 accounting
Pros54 2008-12-18 5.12 accounting

Clone Sequence Records

AT14053.complete Sequence

1456 bp (1456 high quality bases) assembled on 2003-01-22

GenBank Submission: AY089333

> AT14053.complete
GCACAACGGTCATACAAATCCGATATTTTAATGCCGATAGTTCAGGCAGC
ACAGCACCTGGCAACCCTGGGGAATTACAGTTCAGTGGCAAAGTGACAAG
CAAAAATACGAAAATGGTTCTGGAGAGTACTATGATATGCTTTGATAACA
GCGACTTCCAGCGCAACGGAGACTACTTTCCAACTCGTCTCATCGTCCAG
AGAGATGGCATCAATCTGGTCTGCCTGACCAAGCTGCGTTCCAATCCCGA
GAACAATGTGGGCCTGATGACTCTGTCCAACACCGTTGAAGTGCTGGCCA
CTCTTACTAGCGATGCAGGACGGATTTTCTCAAAGATGCATCTGGTTCAG
CCGAAGGGCGAGATAAACCTCCTGACCGGAATCCGAATTGCCCATCTGGT
GCTGAAGCATCGCCAAGGCAAGAACCACAAAATGCGCATCGTGGTCTTTG
TGGGCTCCCCCATCAATCACGAGGAGGGCGATCTAGTGAAGCAGGCCAAG
CGCCTCAAGAAGGAGAAGGTCAACGTAGACATAGTTAGCTTCGGTGATCA
TGGCAACAACAACGAGATTCTCACAGCATTCATCAACGCGCTTAATGGCA
AGGACGGCACCGGCTCCCATTTGGTCAGCGTGCCTCGGGGATCAGTTTTG
TCGGATGCCCTGCTGTCGTCACCCATCATTCAGGGCGAGGACGGCATGGG
CGGAGCTGGCCTGGGCGGCAACGTCTTCGAATTCGGTGTAGATCCCAACG
AGGACCCCGAACTGGCTCTCGCCTTGCGTGTGTCTATGGAGGAGCAACGG
CAGCGCCAGGAGAGCGAGCAACGTCGCGCCAATCCCGATGGGGCTCCACC
GACTGGCGGAGATGCTGGTGGCGGAGGCGGCGTTTCGGGATCTGGACCTG
GAAACGAAGAAAGTGCCGGAGCAGAGAACGAAGCCAACACCGAGGAGGCC
ATGCTGCAGCGTGCCCTGGCCCTGTCCACCGAAACACCCGAGGACAACTT
GCCGGACTTTGCTAACATGACTGAGGAGGAACAGATTGCCTTCGCTATGC
AGATGTCCATGCAGGACGCTCCCGACGACTCTGTTACCCAGCAAGCAAAG
CGCCCAAAGACGGACGAGGCAAACGCTCCCATGGACGTGGACGAGGATTA
CTCGGAGGTGATCGGAGACCCGGCCTTCTTGCAGAGCGTGCTGGAGAATC
TGCCTGGTGTTGATCCCCAGTCGGAGGCGGTGCGCGATGCTGTCGGTTCA
CTCAACAAGGACAAGGACAAAAAGAGCGACGGCAAGGACTCGCAAAAAAA
ATAAACCGCATCTATGATTATATCTAATAAGCTCGTTTAAAGCATTTGTA
TGCCCATTAAAATCATTTGTAGCCGTCTTTCAAATTATGCTTCAAGTGAA
AATATATAAACAAATACACACGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

AT14053.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Pros54-RA 1606 Pros54-RA 1..1423 1..1423 7115 100 Plus
Pros54.a 1452 Pros54.a 168..1452 139..1423 6425 100 Plus
Pros54.b 1533 Pros54.b 234..1518 139..1423 6425 100 Plus
Pros54.a 1452 Pros54.a 1..139 1..139 695 100 Plus
Pros54.b 1533 Pros54.b 1..133 7..139 665 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21526376..21527517 281..1422 5710 100 Plus
chr3L 24539361 chr3L 21526174..21526315 139..280 710 100 Plus
chr3L 24539361 chr3L 21525935..21526073 1..139 695 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:48:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21537441..21538583 281..1423 5715 100 Plus
3L 28110227 3L 21537239..21537380 139..280 710 100 Plus
3L 28110227 3L 21537000..21537138 1..139 695 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21530541..21531683 281..1423 5715 100 Plus
3L 28103327 3L 21530339..21530480 139..280 710 100 Plus
3L 28103327 3L 21530100..21530238 1..139 695 100 Plus
Blast to na_te.dros performed 2019-03-15 17:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
BS4 754 BS4 BS4 754bp 589..648 1200..1141 111 65 Minus

AT14053.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:40:23 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21525935..21526073 1..139 100 -> Plus
chr3L 21526175..21526315 140..280 100 -> Plus
chr3L 21526376..21527517 281..1422 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:19 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1180 114..1293 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:55:37 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1180 114..1293 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:42:16 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn10-RA 1..1191 114..1304 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:46:35 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1180 114..1293 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:11 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn10-RA 1..1191 114..1304 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:11:02 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1422 1..1422 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:55:37 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1422 1..1422 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:42:16 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn10-RA 1..1422 1..1422 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:46:35 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Pros54-RA 1..1422 1..1422 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:11 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
Rpn10-RA 1..1422 1..1422 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:23 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21537000..21537138 1..139 100 -> Plus
3L 21537240..21537380 140..280 100 -> Plus
3L 21537441..21538582 281..1422 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:23 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21537000..21537138 1..139 100 -> Plus
3L 21537240..21537380 140..280 100 -> Plus
3L 21537441..21538582 281..1422 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:40:23 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21537000..21537138 1..139 100 -> Plus
3L 21537240..21537380 140..280 100 -> Plus
3L 21537441..21538582 281..1422 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:42:16 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21530100..21530238 1..139 100 -> Plus
arm_3L 21530340..21530480 140..280 100 -> Plus
arm_3L 21530541..21531682 281..1422 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:17:45 Download gff for AT14053.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21530541..21531682 281..1422 100   Plus
3L 21530100..21530238 1..139 100 -> Plus
3L 21530340..21530480 140..280 100 -> Plus

AT14053.hyp Sequence

Translation from 2 to 1303

> AT14053.hyp
TTVIQIRYFNADSSGSTAPGNPGELQFSGKVTSKNTKMVLESTMICFDNS
DFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLAT
LTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFV
GSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGK
DGTGSHLVSVPRGSVLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNE
DPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGDAGGGGGVSGSGPG
NEESAGAENEANTEEAMLQRALALSTETPEDNLPDFANMTEEEQIAFAMQ
MSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQSVLENL
PGVDPQSEAVRDAVGSLNKDKDKKSDGKDSQKK*

AT14053.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Rpn10-PB 396 CG7619-PB 1..396 38..433 2026 100 Plus
Rpn10-PA 396 CG7619-PA 1..396 38..433 2026 100 Plus

AT14053.pep Sequence

Translation from 113 to 1303

> AT14053.pep
MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVG
LMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHR
QGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNN
EILTAFINALNGKDGTGSHLVSVPRGSVLSDALLSSPIIQGEDGMGGAGL
GGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGD
AGGGGGVSGSGPGNEESAGAENEANTEEAMLQRALALSTETPEDNLPDFA
NMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVI
GDPAFLQSVLENLPGVDPQSEAVRDAVGSLNKDKDKKSDGKDSQKK*

AT14053.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23724-PA 392 GF23724-PA 1..392 1..396 1787 92.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16198-PA 396 GG16198-PA 1..396 1..396 2035 97.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16741-PA 394 GH16741-PA 1..394 1..396 1677 87.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
Rpn10-PB 396 CG7619-PB 1..396 1..396 2026 100 Plus
Rpn10-PA 396 CG7619-PA 1..396 1..396 2026 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:31:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13465-PA 393 GI13465-PA 1..393 1..396 1697 87.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11890-PA 391 GL11890-PA 1..391 1..396 1738 89.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20484-PA 391 GA20484-PA 1..391 1..396 1736 89.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22380-PA 396 GM22380-PA 1..396 1..396 2046 98 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14970-PA 393 GD14970-PA 1..393 1..396 2018 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11829-PA 391 GJ11829-PA 1..391 1..396 1674 88.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17731-PA 394 GK17731-PA 1..379 1..381 1665 85.2 Plus
Dwil\GK24574-PA 394 GK24574-PA 1..379 1..381 1609 83.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:31:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19770-PA 396 GE19770-PA 1..396 1..396 2032 97.2 Plus
Dyak\GE19767-PA 396 GE19767-PA 1..396 1..396 2032 97.2 Plus