Clone AT14148 Report

Search the DGRC for AT14148

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:141
Well:48
Vector:pOTB7
Associated Gene/TranscriptCG2604-RA
Protein status:AT14148.pep: gold
Preliminary Size:3313
Sequenced Size:1710

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2604 2002-01-01 Sim4 clustering to Release 2
CG2604 2002-01-11 Blastp of sequenced clone
CG2604 2003-01-01 Sim4 clustering to Release 3
CG2604 2008-04-29 Release 5.5 accounting
CG2604 2008-08-15 Release 5.9 accounting
CG2604 2008-12-18 5.12 accounting

Clone Sequence Records

AT14148.complete Sequence

1710 bp (1710 high quality bases) assembled on 2002-01-11

GenBank Submission: AY075205

> AT14148.complete
CTCAAACAAATTTCAGACGGTGAAAACACTCCTTCAATCCTTAGAATCAG
TGAAGTCGGGCCATTAGACGCTTGCAGGAATACCCCTAACTCCATTCAGA
AGAGCTTCGACTTTGGCCGGTTGGATTTTCCACCTACATACGTACACGAT
GCATGTGTATTTGAATTAACTGAATAAGAACGCCGATTAGCAGCTCAGTA
GGCGGAATCAGTAGACAGCGATACAGTGATATCGCAATATCGCGCAATCT
GACATCGAATCTTTGAAGGCGACTTACGGCGAAATGTCTGGCGATCGACT
GGATGTGATTATCTTTGGGGCCAGTGGCTTCACCGGCAAGTACACGGTCT
TCGAGGCGGTCACGGTGCTGCGCGGCTTGCGATGGGGCATCGCTGGCAGG
AACCGCGAGAAGCTGGAGGCGGTGTTGAAGGAGATGGGCGCCAAGGCCAA
GAAGGACCTCTCGCAGGTGCCCATCTTCATCGCGGACGTCAACGACCAGG
CCTCCCTGCTTGAGATGGCGAAAAAGTGCCGGATTGTGGTGAACACGGCA
GGACCCTACCGCTTTCACGGCGAAAACGTCGTGAAGTGCTGCATCGAATC
GGGCACGCACCATGTGGACGTTAGCGGCGAGCCCCAGTACATGGAGACCA
TGCAGCTGAGGTACGATCAGCTGGCCAGGGAAAAGGGCGTGTACGTGGTC
AGCGCCTGCGGCTTTGACTCCATACCCGCCGACATGGGCGTCGTCTTTGT
GGAAAAAAACTTCGACGGCGTGGTGAACTCCGTGGAGACCTTCCTGGAGA
CCGGAATCAAAGAAGGCGGCAGTGGCGGAGGCACTGCCGGCCTCAACTAC
GGAACCTGGGAGAGCGCCGTTTACGGGCTAGCTCACTCTGACGAGCTGCG
CGGCATCCGGAAGCAGATCTATCCCCAGAGACTGCCAAGATTCTATCCCT
TTCTCAAGCCACGACCGCTGGTCTTCCGCTCTACCGAGGTTGACAAGGTG
TGTCTACCTTTTCCCGGCTCCGACCGCTCGGTGGTAATGAGGTCCCAGCG
CTTCCTCTACGACCAGGACAAGAAACGTCCGGTCCAGATGCAGGCCTACG
TGGGATTTTCGTCTTGGCTGGTCGCCGGCGGTGTCATCTTTTTTGCCACC
ATCTTCGGTCTGCTGTCAAAGTTCAAGCTGGGACGTACGCTGCTGCTCAA
TTACCCCGGTCTCTTCTCCGGCGGATTGGCCTCTCGTTCCGGCCCAAGTG
AGGAGTCAATGGAGCGCACCTATTTCAAGATGACTTTTAAGGCCAGTGGC
TGGCTTAAGAGCGATCGCCTGGCCGAGAGTTCAAACCAATACACGGAGTC
CCCGACCAAGACGCTGATGGTCCGCGTATCGGGCATGAATCCCGGATATG
GAGCCACCTGCGTGGCTGTGCTCTCAGCGGCACTGACCATTCTTCGTGAG
TCGGACAAGATGCCCAGCACAGGCGGAGTGCTGCCTCCAGCTGCCGCCTT
CTCTAAGACCGGACTAATTAGCGAGTTGGAGAAGCACGACCACGGCATCA
AGTTTGAGATTCTGGCCAACAAGTAATGTCCAGAATCGCACTTCTCCCTC
CCAGCGGCTCTCTTTTAATCACCTTACTTGGCTGTTTGTTACTCGCGGTT
TGAACTGTAATTATATAAGCACTTATTAAACTAACCCCCACAAAAAAAAA
AAAAAAAAAA

AT14148.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-RA 1939 CG2604-RA 89..1780 1..1692 8445 99.9 Plus
CG2604-RB 1648 CG2604-RB 82..1550 224..1692 7330 99.9 Plus
CG2604-RC 1895 CG2604-RC 313..1738 267..1692 7115 99.9 Plus
CG2604-RC 1895 CG2604-RC 89..314 1..226 1130 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1047388..1048855 1691..224 7325 99.9 Minus
chr3R 27901430 chr3R 1048914..1049139 226..1 1130 100 Minus
chr3R 27901430 chr3R 8232127..8232621 298..792 840 78 Plus
chr3R 27901430 chr3R 8232857..8233412 1025..1580 320 70.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:48:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5221723..5223191 1692..224 7330 99.9 Minus
3R 32079331 3R 5223250..5223475 226..1 1130 100 Minus
3R 32079331 3R 12406738..12407232 298..792 840 78 Plus
3R 32079331 3R 12407468..12408023 1025..1580 320 70.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4962554..4964022 1692..224 7330 99.9 Minus
3R 31820162 3R 4964081..4964306 226..1 1130 100 Minus
3R 31820162 3R 12147861..12148063 590..792 490 82.7 Plus
3R 31820162 3R 12147569..12147826 298..555 420 77.5 Plus
3R 31820162 3R 12148728..12148854 1454..1580 230 78.7 Plus
3R 31820162 3R 12148299..12148373 1025..1099 180 82.6 Plus
Blast to na_te.dros performed on 2019-03-16 16:47:04 has no hits.

AT14148.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:48:16 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1047388..1048852 227..1691 99 <- Minus
chr3R 1048914..1049139 1..226 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:31 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 1..1293 284..1576 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:49:22 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 1..1293 284..1576 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:45:39 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1293 284..1576 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:16:26 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RB 1..1293 284..1576 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:41:25 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1293 284..1576 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:13:17 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1691 1..1691 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:49:22 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1691 1..1691 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:45:39 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1581 111..1691 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:16:26 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1691 1..1691 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:41:25 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
CG2604-RA 1..1581 111..1691 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:16 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5221724..5223188 227..1691 99 <- Minus
3R 5223250..5223475 1..226 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:16 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5221724..5223188 227..1691 99 <- Minus
3R 5223250..5223475 1..226 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:16 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5221724..5223188 227..1691 99 <- Minus
3R 5223250..5223475 1..226 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:45:39 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1047446..1048910 227..1691 99 <- Minus
arm_3R 1048972..1049197 1..226 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:50:24 Download gff for AT14148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4962555..4964019 227..1691 99 <- Minus
3R 4964081..4964306 1..226 100   Minus

AT14148.pep Sequence

Translation from 283 to 1575

> AT14148.pep
MSGDRLDVIIFGASGFTGKYTVFEAVTVLRGLRWGIAGRNREKLEAVLKE
MGAKAKKDLSQVPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVV
KCCIESGTHHVDVSGEPQYMETMQLRYDQLAREKGVYVVSACGFDSIPAD
MGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWESAVYGLA
HSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSV
VMRSQRFLYDQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLG
RTLLLNYPGLFSGGLASRSGPSEESMERTYFKMTFKASGWLKSDRLAESS
NQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRESDKMPSTGGVL
PPAAAFSKTGLISELEKHDHGIKFEILANK*

AT14148.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17500-PA 430 GF17500-PA 2..430 3..430 1974 84.6 Plus
Dana\GF17952-PA 433 GF17952-PA 1..430 1..429 1550 66.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11166-PA 430 GG11166-PA 1..430 1..430 2165 93 Plus
Dere\GG18861-PA 431 GG18861-PA 1..431 1..430 1636 70.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13859-PA 431 GH13859-PA 6..431 5..430 1772 74.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:19
Subject Length Description Subject Range Query Range Score Percent Strand
Sccpdh1-PB 430 CG2604-PB 1..430 1..430 2224 100 Plus
Sccpdh1-PC 430 CG2604-PC 1..430 1..430 2224 100 Plus
Sccpdh1-PA 430 CG2604-PA 1..430 1..430 2224 100 Plus
Sccpdh2-PA 431 CG5167-PA 1..431 1..430 1604 70.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24823-PA 431 GI24823-PA 1..431 1..430 1844 77.7 Plus
Dmoj\GI20982-PA 435 GI20982-PA 9..431 5..430 1411 60.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24001-PA 430 GL24001-PA 1..430 1..430 2001 84.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15398-PA 430 GA15398-PA 1..430 1..430 2001 84.4 Plus
Dpse\GA18705-PA 612 GA18705-PA 183..612 1..430 1647 69.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10657-PA 427 GM10657-PA 1..427 1..430 2216 96.5 Plus
Dsec\GM24027-PA 431 GM24027-PA 1..431 1..430 1654 71 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19638-PA 430 GD19638-PA 1..430 1..430 2238 97 Plus
Dsim\GD18827-PA 431 GD18827-PA 1..431 1..430 1654 70.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:45:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24467-PA 430 GJ24467-PA 1..430 1..430 1844 77.4 Plus
Dvir\GJ20702-PA 133 GJ20702-PA 1..131 84..249 351 45.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14366-PA 434 GK14366-PA 5..434 2..430 1885 79.8 Plus
Dwil\GK13975-PA 430 GK13975-PA 1..430 1..430 1677 71.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:45:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25305-PA 430 GE25305-PA 1..430 1..430 2122 91.6 Plus
Dyak\GE26188-PA 431 GE26188-PA 1..431 1..430 1652 70.3 Plus

AT14148.hyp Sequence

Translation from 283 to 1575

> AT14148.hyp
MSGDRLDVIIFGASGFTGKYTVFEAVTVLRGLRWGIAGRNREKLEAVLKE
MGAKAKKDLSQVPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVV
KCCIESGTHHVDVSGEPQYMETMQLRYDQLAREKGVYVVSACGFDSIPAD
MGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWESAVYGLA
HSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSV
VMRSQRFLYDQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLG
RTLLLNYPGLFSGGLASRSGPSEESMERTYFKMTFKASGWLKSDRLAESS
NQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRESDKMPSTGGVL
PPAAAFSKTGLISELEKHDHGIKFEILANK*

AT14148.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:11:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG2604-PB 430 CG2604-PB 1..430 1..430 2224 100 Plus
CG2604-PC 430 CG2604-PC 1..430 1..430 2224 100 Plus
CG2604-PA 430 CG2604-PA 1..430 1..430 2224 100 Plus
CG5167-PA 431 CG5167-PA 1..431 1..430 1604 70.1 Plus