Clone AT14166 Report

Search the DGRC for AT14166

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:141
Well:66
Vector:pOTB7
Associated Gene/TranscriptCG4434-RA
Protein status:AT14166.pep: gold
Preliminary Size:1799
Sequenced Size:1870

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4434 2003-01-01 Sim4 clustering to Release 3
CG4434 2004-07-14 Blastp of sequenced clone
CG4434 2008-04-29 Release 5.5 accounting
CG4434 2008-08-15 Release 5.9 accounting
CG4434 2008-12-18 5.12 accounting

Clone Sequence Records

AT14166.complete Sequence

1870 bp (1870 high quality bases) assembled on 2004-07-14

GenBank Submission: BT015308

> AT14166.complete
GGTGGTCAAAATATCAAGTATTTCTCTTATCAGTTGATTTTGTTCCAAAT
TCGAATTAACTTTATAGACGGTTGTGTTTTTTCAAAATGCTTCGTTATAC
GGCACGGATTTTGAATGGGATTTACCCACTTATGCCAAGGCAAGTATTAA
AACGTTCCGCACACCAGGTGCCCGAGAAGCTGAAAAAAGTTGAGACGGAC
AAGGACCCGGAATTCTCGGAAATGGTTCTTTATTATTATCACAAGGCCGC
GCAGACTATGGAGCCTGCATTGCTCAAGGAAATGGAAAAGTATCCGCATA
TGAAGCCGGAGGAGCGTCAGGCTCGTGTCACCGCTATACTGAATCTGCTT
GGGAGCGTCTCCACCTCGGTGGAGGTTAATTTTCCCATTGTCCGCAAAAA
CGGCACCTACGAGATCATCAGCGGTTATCGTTCGCATCATGTACGCCATC
GATTGCCTCTCAAGGGCGGAATCCGATACGCTCTGGACGTGAACGAGAGC
GAAGTTAAAGCCCTTGCCGCCATTATGACGTTCAAGTGCGCTTGCGTGAA
TGTACCTTATGGTGGATCTAAGGGCGGCATTTGTATCGATCCCAAGAAGT
ATACAGTGGATGAGCTGCAGACGATCACACGGCGATACACGATGGAGTTG
CTCAAGCGTAATATGATTGGTCCCGGCATCGATGTACCGGCGCCCGATGT
GAACACTGGTCCGCGTGAGATGAGCTGGATTGTTGATCAGTACCAGAAGA
CATTTGGCTACAAGGATATCAATTCATCGGCTATTGTCACCGGGAAGCCC
GTACACAACGGCGGCATTAATGGTCGACATTCGGCCACGGGCAGAGGCGT
TTGGAAGGCGGGCGATCTCTTTCTGAAGGATAAGGAATGGATGGATCTGC
TCAAGTGGAAGACGGGATGGAAGGACAAGACGGTCATAGTGCAGGGATTT
GGCAATGTGGGCTCCTTTGCCGCTAAGTATGTGCACGAGGCGGGCGCCAA
AGTCATCGGAATAAAAGAGTTTGATGTTTCTCTGGTTAATAAGGACGGCA
TAGATATTAATGATCTTTTTGAATACACTGAGGAAAAGAAGACTATTAAA
GGATATCCAAAAGCTCAGGAGTCTAAGGAGGACTTGTTGGTAGCCGAAAC
CGATATCCTTATGCCGTGTGCCACCCAAAAAGTGATAACCACCGACAATG
CCAAAGACATCAAGGCCAAGCTGATCCTGGAAGGCGCCAACGGGCCGACC
ACACCATCTGGCGAGAAAATCCTATTGGATAAGGGTGTCCTCCTAGTTCC
CGATCTCTATTGCAATGCGGGCGGCGTAACAGTATCCTACTTTGAGTACC
TCAAAAACATTAACCACGTGTCATATGGCAAAATGAACTCTAAATCTACA
TCCGAGCTTATTATCGAACTGATGAACTCCATCAATGAGTCTTTGCATGA
ATGCCCCGATAGTCAACTACCGAACATATGTCCCAATAAGAAACTTAAGA
GGATACAACAATGCACCACAGAGGCGGATATCGTGGACTCGGCTCTCCAA
ACAGTTATGGAATCTGCAGCACGTGGCATCAAGGAGATGGCCCACAAATT
TGAATTGTGTAACGATCTGCGGAGGGCCGCCTACGTTTGGTCTTCATTCA
AAATTTTCCAAGCCATGGAAAGCTCCGGAATTTCCCAACAGTAGTGGTTT
ACCCTCAAGAACAAAAGAAATTCACAGTTTTTCATTGGTTAATTTTTAAT
TCTTAAGTTGAATAAAAGAGTTACTATTTAATTAAAACATAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

AT14166.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:00:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG4434-RA 1828 CG4434-RA 34..1827 1..1794 8970 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19112478..19113072 1062..468 2975 100 Minus
chr3R 27901430 chr3R 19113128..19113596 469..1 2345 100 Minus
chr3R 27901430 chr3R 19112011..19112418 1469..1062 2040 100 Minus
chr3R 27901430 chr3R 19111629..19111949 1790..1470 1605 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:49:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23289066..23289660 1062..468 2975 100 Minus
3R 32079331 3R 23289716..23290184 469..1 2345 100 Minus
3R 32079331 3R 23288599..23289006 1469..1062 2040 100 Minus
3R 32079331 3R 23288213..23288537 1794..1470 1625 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23029897..23030491 1062..468 2975 100 Minus
3R 31820162 3R 23030547..23031015 469..1 2345 100 Minus
3R 31820162 3R 23029430..23029837 1469..1062 2040 100 Minus
3R 31820162 3R 23029044..23029368 1794..1470 1625 100 Minus
Blast to na_te.dros performed 2019-03-15 11:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
invader3 5484 invader3 INVADER3 5484bp 3807..3913 110..213 113 62.7 Plus

AT14166.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:25:53 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19111629..19111949 1470..1790 100 <- Minus
chr3R 19112011..19112418 1062..1469 100 <- Minus
chr3R 19112479..19113071 469..1061 100 <- Minus
chr3R 19113129..19113596 1..468 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:36 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 1..1608 87..1694 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:34:58 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 1..1608 87..1694 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:28:28 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 1..1608 87..1694 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:18:51 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 1..1608 87..1694 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:32:47 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 1..1608 87..1694 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:41:32 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 6..1795 1..1790 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:34:58 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 6..1795 1..1790 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:28:28 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 6..1795 1..1790 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:18:51 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 6..1795 1..1790 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:47 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
CG4434-RA 6..1795 1..1790 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:25:53 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23288217..23288537 1470..1790 100 <- Minus
3R 23288599..23289006 1062..1469 100 <- Minus
3R 23289067..23289659 469..1061 100 <- Minus
3R 23289717..23290184 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:25:53 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23288217..23288537 1470..1790 100 <- Minus
3R 23288599..23289006 1062..1469 100 <- Minus
3R 23289067..23289659 469..1061 100 <- Minus
3R 23289717..23290184 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:25:53 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23288217..23288537 1470..1790 100 <- Minus
3R 23288599..23289006 1062..1469 100 <- Minus
3R 23289067..23289659 469..1061 100 <- Minus
3R 23289717..23290184 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:28:28 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19113939..19114259 1470..1790 100 <- Minus
arm_3R 19114321..19114728 1062..1469 100 <- Minus
arm_3R 19114789..19115381 469..1061 100 <- Minus
arm_3R 19115439..19115906 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:56:02 Download gff for AT14166.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23029048..23029368 1470..1790 100 <- Minus
3R 23029430..23029837 1062..1469 100 <- Minus
3R 23029898..23030490 469..1061 100 <- Minus
3R 23030548..23031015 1..468 100   Minus

AT14166.pep Sequence

Translation from 86 to 1693

> AT14166.pep
MLRYTARILNGIYPLMPRQVLKRSAHQVPEKLKKVETDKDPEFSEMVLYY
YHKAAQTMEPALLKEMEKYPHMKPEERQARVTAILNLLGSVSTSVEVNFP
IVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFK
CACVNVPYGGSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDV
PAPDVNTGPREMSWIVDQYQKTFGYKDINSSAIVTGKPVHNGGINGRHSA
TGRGVWKAGDLFLKDKEWMDLLKWKTGWKDKTVIVQGFGNVGSFAAKYVH
EAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKGYPKAQESKEDL
LVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKG
VLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSIN
ESLHECPDSQLPNICPNKKLKRIQQCTTEADIVDSALQTVMESAARGIKE
MAHKFELCNDLRRAAYVWSSFKIFQAMESSGISQQ*

AT14166.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18014-PA 535 GF18014-PA 1..535 1..535 2340 78.9 Plus
Dana\GF17976-PA 561 GF17976-PA 37..560 24..533 1271 47 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12444-PA 535 GG12444-PA 1..535 1..535 2758 95.1 Plus
Dere\GG12388-PA 562 GG12388-PA 25..561 16..533 1271 46.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20746-PA 535 GH20746-PA 1..535 1..535 2238 76.3 Plus
Dgri\GH19680-PA 557 GH19680-PA 18..556 9..533 1278 45.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
bb8-PA 535 CG4434-PA 1..535 1..535 2792 100 Plus
Gdh-PF 549 CG5320-PF 40..548 26..533 1238 48.2 Plus
Gdh-PA 562 CG5320-PA 40..561 26..533 1222 46.7 Plus
Gdh-PD 391 CG5320-PD 1..390 147..533 963 49.9 Plus
Gdh-PB 404 CG5320-PB 1..403 147..533 947 47.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23212-PA 507 GI23212-PA 1..507 28..535 2159 77 Plus
Dmoj\GI23213-PA 522 GI23213-PA 12..522 23..535 2146 75.2 Plus
Dmoj\GI22276-PA 557 GI22276-PA 18..556 9..533 1280 45.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23033-PA 533 GL23033-PA 21..533 23..535 2265 80.1 Plus
Dper\GL24163-PA 561 GL24163-PA 37..560 24..533 1262 46.6 Plus
Dper\GL22650-PA 126 GL22650-PA 1..125 407..532 204 39.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18181-PA 533 GA18181-PA 21..533 23..535 2260 79.9 Plus
Dpse\GA23808-PA 529 GA23808-PA 18..528 19..532 1914 67.1 Plus
Dpse\GA18802-PB 548 GA18802-PB 37..547 24..533 1276 47.9 Plus
Dpse\GA18802-PA 561 GA18802-PA 37..560 24..533 1262 46.6 Plus
Dpse\GA18802-PC 404 GA18802-PC 1..403 147..533 971 47.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23576-PA 535 GM23576-PA 1..535 1..535 2866 99.3 Plus
Dsec\GM23525-PA 558 GM23525-PA 25..557 16..533 1271 46.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18391-PA 535 GD18391-PA 1..535 1..535 2866 99.3 Plus
Dsim\GD18335-PA 562 GD18335-PA 25..561 16..533 1269 46.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22872-PA 535 GJ22872-PA 1..535 1..535 2203 75 Plus
Dvir\GJ22871-PA 507 GJ22871-PA 1..507 28..535 2196 77.8 Plus
Dvir\GJ24069-PA 557 GJ24069-PA 18..556 9..533 1285 45.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11580-PA 534 GK11580-PA 25..534 26..535 2269 80.2 Plus
Dwil\GK11603-PA 562 GK11603-PA 25..561 16..533 1271 46.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23967-PA 535 GE23967-PA 1..535 1..535 2782 95.7 Plus
Dyak\GE10843-PA 562 GE10843-PA 25..561 16..533 1271 46.2 Plus

AT14166.hyp Sequence

Translation from 86 to 1693

> AT14166.hyp
MLRYTARILNGIYPLMPRQVLKRSAHQVPEKLKKVETDKDPEFSEMVLYY
YHKAAQTMEPALLKEMEKYPHMKPEERQARVTAILNLLGSVSTSVEVNFP
IVRKNGTYEIISGYRSHHVRHRLPLKGGIRYALDVNESEVKALAAIMTFK
CACVNVPYGGSKGGICIDPKKYTVDELQTITRRYTMELLKRNMIGPGIDV
PAPDVNTGPREMSWIVDQYQKTFGYKDINSSAIVTGKPVHNGGINGRHSA
TGRGVWKAGDLFLKDKEWMDLLKWKTGWKDKTVIVQGFGNVGSFAAKYVH
EAGAKVIGIKEFDVSLVNKDGIDINDLFEYTEEKKTIKGYPKAQESKEDL
LVAETDILMPCATQKVITTDNAKDIKAKLILEGANGPTTPSGEKILLDKG
VLLVPDLYCNAGGVTVSYFEYLKNINHVSYGKMNSKSTSELIIELMNSIN
ESLHECPDSQLPNICPNKKLKRIQQCTTEADIVDSALQTVMESAARGIKE
MAHKFELCNDLRRAAYVWSSFKIFQAMESSGISQQ*

AT14166.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:11:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG4434-PA 535 CG4434-PA 1..535 1..535 2792 100 Plus
Gdh-PF 549 CG5320-PF 40..548 26..533 1238 48.2 Plus
Gdh-PA 562 CG5320-PA 40..561 26..533 1222 46.7 Plus
Gdh-PD 391 CG5320-PD 1..390 147..533 963 49.9 Plus
Gdh-PB 404 CG5320-PB 1..403 147..533 947 47.8 Plus