BDGP Sequence Production Resources |
Search the DGRC for AT14373
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 143 |
Well: | 73 |
Vector: | pOTB7 |
Associated Gene/Transcript | CLS-RA |
Protein status: | AT14373.pep: gold |
Preliminary Size: | 1150 |
Sequenced Size: | 1455 |
Gene | Date | Evidence |
---|---|---|
CG4774 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4774 | 2002-04-21 | Blastp of sequenced clone |
CG4774 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4774 | 2008-04-29 | Release 5.5 accounting |
CG4774 | 2008-08-15 | Release 5.9 accounting |
CG4774 | 2008-12-18 | 5.12 accounting |
1455 bp (1455 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113254
> AT14373.complete GTTTTTTATCTCTCATTCCTATGACCTCAGTATTGCATATAATTTTATAA ACATTTGAATAAAAGAAACGTCATTTCATTTTGCAATCACAATTGAATAG TATACACTTTCTTATATAAGGTGCCATCAGTGAACAAGGATTTCCGACCA ATGGTGCGTGTTTGAGCTGGTGATAACAGATGGCCAAGGGTCGGTGGTCG ATCAATTTGGAACCAAGGTTACGAATCTCAATAAATTGAAACTGATTGGG CATTTTGTGTGATTACAGTGCTCGCGAAAGAGTCTGGACTTGAGACAGGG ATCGAACGTCAATTAACCTATGCTGCCCGCCATCATTTTCCGGCAGGTGC AGCGCCCACTGCACCATGGAGCCGCCACATTGGAGCACGTTTTGGGAGTC GGCGGAAGCAGCTTCGTGAACTGCCTGAATCGCTATGCGGCCGCCACGGG ATTCATTCGGATCTCGTTTCTGGACATTAAGCGGCGCAGGAACTACGAGT TAGCCAGACTTCGCCTCTATGCCGATGAGAAGAAGCAGTCGCTCCATTTG CGCACCTTGCAGGGACGCCATCTCCTGCAGGGTGTCATCGAAAGGAAGAA CTTCCTGGTGGATGACATCCGGGAGGCCAGGCACAAAGTCCAGGAGCGGG TGCGCGAGAAGATCGACGAGATACGCGAAGAGCGAGAGAACATTATGACC ATACCCAACATGCTGACCATCAGTCGTGCCGTCCTCTCACCCTACATCGG ATATGTTATAGTCCAGGGCGATTTCACCCTGGGCATGAGCCTTCTAGCGT TCGCCGGCATCACAGATCTGTTGGATGGACAGATCGCACGACGGTGGCCT TCGCAGGCGAGCAAGTTCGGTTCCTTCCTGGACCCCATGGCTGATAAGTT GCTGATGGGCTCGCTGGTCATCTCGCTGTGCTACACGGACCTGCTGCCCA TGTGGCTCATGGGCATCGTGGTGTTCCGGGATGTCTTTCTTCTAGGAGCT GGATTTGTTATACGCTACATAAGTCTGCCACCGCCGAAAACCTTTTCGCG CTACTTCGACGCCACCCATGTTACTGCCCAACTGGAGCCCACGCTGCTCA GCAAGATCAACACGGGCGTCCAGTTGGCCACCATTGGACTGAGCCTGGGA GCTCCCATTTGGAACTATTTGGATCACCCAGCTTTGCAGGGACTTTGGTA TCTGACTGGCCTGACTACGGCTGCCACTGCCCTCAGCTACGTCATGAATC GGCATAATACCTTTAAGATTATCCAAAAAAAGACGTAGGGCCGGGCATTT CCGCTAAATATCTGAGTACTATGAAGGAGTAGTATCTCTCCTTAAGCAAT GATTAGTATGTACCATGTTTTCTAAATGATTAACATATTAAATTTAAAAA AATCTATTTTGTTAATAAATTTTAAGTGTTTTTCCACAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4774-RB | 1439 | CG4774-RB | 1..1439 | 1..1439 | 7195 | 100 | Plus |
CG4774-RC | 1408 | CG4774-RC | 207..1378 | 268..1439 | 5860 | 100 | Plus |
CG4774-RA | 1397 | CG4774-RA | 196..1367 | 268..1439 | 5860 | 100 | Plus |
CG4774-RC | 1408 | CG4774-RC | 137..207 | 119..189 | 355 | 100 | Plus |
CG4774-RA | 1397 | CG4774-RA | 162..196 | 119..153 | 175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21509349..21510050 | 820..119 | 3510 | 100 | Minus |
chr3R | 27901430 | chr3R | 21508270..21508535 | 1437..1172 | 1330 | 100 | Minus |
chr3R | 27901430 | chr3R | 21508802..21509018 | 1036..820 | 1085 | 100 | Minus |
chr3R | 27901430 | chr3R | 21508601..21508737 | 1172..1036 | 685 | 100 | Minus |
chr3R | 27901430 | chr3R | 21510283..21510404 | 122..1 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25686315..25687016 | 820..119 | 3510 | 100 | Minus |
3R | 32079331 | 3R | 25685234..25685501 | 1439..1172 | 1340 | 100 | Minus |
3R | 32079331 | 3R | 25685768..25685984 | 1036..820 | 1085 | 100 | Minus |
3R | 32079331 | 3R | 25685567..25685703 | 1172..1036 | 685 | 100 | Minus |
3R | 32079331 | 3R | 25687249..25687370 | 122..1 | 610 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25427146..25427847 | 820..119 | 3510 | 100 | Minus |
3R | 31820162 | 3R | 25426065..25426332 | 1439..1172 | 1340 | 100 | Minus |
3R | 31820162 | 3R | 25426599..25426815 | 1036..820 | 1085 | 100 | Minus |
3R | 31820162 | 3R | 25426398..25426534 | 1172..1036 | 685 | 100 | Minus |
3R | 31820162 | 3R | 25428080..25428201 | 122..1 | 610 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21508601..21508736 | 1037..1172 | 100 | <- | Minus |
chr3R | 21508802..21509017 | 821..1036 | 100 | <- | Minus |
chr3R | 21509349..21510048 | 121..820 | 100 | <- | Minus |
chr3R | 21510285..21510404 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RC | 1..969 | 320..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RC | 1..969 | 320..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CLS-RA | 1..969 | 320..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RC | 1..969 | 320..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CLS-RA | 1..969 | 320..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RB | 1..1437 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RB | 1..1437 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CLS-RB | 1..1437 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4774-RB | 1..1437 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CLS-RB | 1..1437 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25685236..25685500 | 1173..1437 | 100 | <- | Minus |
3R | 25685567..25685702 | 1037..1172 | 100 | <- | Minus |
3R | 25685768..25685983 | 821..1036 | 100 | <- | Minus |
3R | 25686315..25687014 | 121..820 | 100 | <- | Minus |
3R | 25687251..25687370 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25685236..25685500 | 1173..1437 | 100 | <- | Minus |
3R | 25685567..25685702 | 1037..1172 | 100 | <- | Minus |
3R | 25685768..25685983 | 821..1036 | 100 | <- | Minus |
3R | 25686315..25687014 | 121..820 | 100 | <- | Minus |
3R | 25687251..25687370 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25685236..25685500 | 1173..1437 | 100 | <- | Minus |
3R | 25685567..25685702 | 1037..1172 | 100 | <- | Minus |
3R | 25685768..25685983 | 821..1036 | 100 | <- | Minus |
3R | 25686315..25687014 | 121..820 | 100 | <- | Minus |
3R | 25687251..25687370 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21510958..21511222 | 1173..1437 | 100 | <- | Minus |
arm_3R | 21511289..21511424 | 1037..1172 | 100 | <- | Minus |
arm_3R | 21511490..21511705 | 821..1036 | 100 | <- | Minus |
arm_3R | 21512037..21512736 | 121..820 | 100 | <- | Minus |
arm_3R | 21512973..21513092 | 1..120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25426067..25426331 | 1173..1437 | 100 | <- | Minus |
3R | 25426398..25426533 | 1037..1172 | 100 | <- | Minus |
3R | 25426599..25426814 | 821..1036 | 100 | <- | Minus |
3R | 25427146..25427845 | 121..820 | 100 | <- | Minus |
3R | 25428082..25428201 | 1..120 | 100 | Minus |
Translation from 319 to 1287
> AT14373.pep MLPAIIFRQVQRPLHHGAATLEHVLGVGGSSFVNCLNRYAAATGFIRISF LDIKRRRNYELARLRLYADEKKQSLHLRTLQGRHLLQGVIERKNFLVDDI REARHKVQERVREKIDEIREERENIMTIPNMLTISRAVLSPYIGYVIVQG DFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLV ISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATH VTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHPALQGLWYLTGLTT AATALSYVMNRHNTFKIIQKKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18236-PA | 329 | GF18236-PA | 1..328 | 1..320 | 1625 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12226-PA | 322 | GG12226-PA | 1..322 | 1..322 | 1697 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18601-PA | 331 | GH18601-PA | 1..331 | 1..322 | 1443 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CLS-PD | 322 | CG4774-PD | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PC | 322 | CG4774-PC | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PA | 322 | CG4774-PA | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PB | 322 | CG4774-PB | 1..322 | 1..322 | 1648 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10348-PA | 336 | GI10348-PA | 1..336 | 1..322 | 1499 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22301-PA | 133 | GL22301-PA | 1..133 | 190..322 | 685 | 97 | Plus |
Dper\GL22300-PA | 121 | GL22300-PA | 1..115 | 1..110 | 465 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18422-PA | 327 | GA18422-PA | 1..327 | 1..322 | 1545 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10226-PA | 322 | GM10226-PA | 1..322 | 1..322 | 1702 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18179-PA | 322 | GD18179-PA | 1..322 | 1..322 | 1706 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10200-PA | 336 | GJ10200-PA | 1..335 | 1..321 | 1509 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14391-PA | 336 | GK14391-PA | 1..336 | 1..322 | 1482 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10674-PA | 322 | GE10674-PA | 1..322 | 1..322 | 1697 | 99.4 | Plus |
Translation from 319 to 1287
> AT14373.hyp MLPAIIFRQVQRPLHHGAATLEHVLGVGGSSFVNCLNRYAAATGFIRISF LDIKRRRNYELARLRLYADEKKQSLHLRTLQGRHLLQGVIERKNFLVDDI REARHKVQERVREKIDEIREERENIMTIPNMLTISRAVLSPYIGYVIVQG DFTLGMSLLAFAGITDLLDGQIARRWPSQASKFGSFLDPMADKLLMGSLV ISLCYTDLLPMWLMGIVVFRDVFLLGAGFVIRYISLPPPKTFSRYFDATH VTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHPALQGLWYLTGLTT AATALSYVMNRHNTFKIIQKKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CLS-PD | 322 | CG4774-PD | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PC | 322 | CG4774-PC | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PA | 322 | CG4774-PA | 1..322 | 1..322 | 1648 | 100 | Plus |
CLS-PB | 322 | CG4774-PB | 1..322 | 1..322 | 1648 | 100 | Plus |