Clone AT14535 Report

Search the DGRC for AT14535

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:145
Well:35
Vector:pOTB7
Associated Gene/Transcriptbrv2-RA
Protein status:AT14535.pep: gold
Preliminary Size:2124
Sequenced Size:2387

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16793 2002-01-01 Sim4 clustering to Release 2
CG16793 2002-01-11 Blastp of sequenced clone
CG16793 2003-01-01 Sim4 clustering to Release 3
CG16793 2008-04-29 Release 5.5 accounting
CG16793 2008-08-15 Release 5.9 accounting
CG16793 2008-12-18 5.12 accounting

Clone Sequence Records

AT14535.complete Sequence

2387 bp (2387 high quality bases) assembled on 2002-01-11

GenBank Submission: AY075208

> AT14535.complete
CAGCAATTTCAAAGAACGCCAGTTAAAATGAATCTCTCAAGTATTAGCCG
GAAGGACTTGACGTGTTTCGGAGTGACCACATGTGTCGTTATGGTGTGCT
TCGTTCTGGTCTCAATCTTCTCCGGATTCATGCACGAGCCCCAGAGATTC
AAGACGATGTTGGTAACCATCGTCCTGGTCTTCTTTTTCCAATATCTTAT
CCTGGAGCCCATTCGTTTCTTCATTCAGAGCATCGATTATGCCACCTGGC
CGCAGGAGGATCCGCCCTATAGAGCGGAGGAGGGAGGGCCCACTATGGAC
CACATTGGCTACTTGAAGATCCGGCTACGCAGTCTGCGCTCCGAGCTCCT
GATCTCCGAGGGCCACACGAACGAGATGCTAAACCAGAAATACAAGCATA
TTGCCGGGGACCTGTTGCTCTATGGTTCCTACTTTATTGCCCTGATGCTG
ATGGTGGTGTTGCAGGAGGATCATACTAATTACTACAATACCAACAACAT
GCAGCGCCTCTTCTGGGACAATACCTCGGTCACCTTCGGCCTGTCGCAGG
TGTACTTTATATACCAGGTACACAGCTATATGAAGATCACCCTAGTCGAG
GCCTTCTACGCGCAGAAAACCAACGGCTACGAGGGCTGGTGGGCCATGGA
ACAGTGGCAGAAGATCGGTGTGGTTCGCCTGCGCCAAATGCGCCCAGTGG
ACTGCCATATTGGACTGGGCAAGCCAGAGTGGGACAAGAAAACGTATGCG
CCCGAGTGGCGTCTTCCTTATCACCGGATGCATTATACGGAGAAGTTCTG
GCGTATCTACGACCCCTTTGTACCGGCCGAGTTCGAGCCCAGTTTTCTGA
ATGGCCTGCTACTCAACTACGATCATTATGGCTATTTGCTCAACTACCCG
GAAGTGGCCGGCTACGTAGTGCTCATGATGAGCACAAAGATAAACTGCTT
GAAGCAGATCGAATACCTGAGAGACTACAGCTGGCTGGATAAAAATACTT
CGGCTTTGTTTATCGACTTGACGATGTACAACGCCGATGCCAACCTTTTC
ACGTTGATCACTCTGCGTGTGGAGAACAGCCCATTCGGGATCCAGTTGCC
CCGTGTGCATGTGGATTCTGTGTCAATGCTGGGAAATGTGGAGACGAGAA
GCAACTCTGAGCTTCTCATACTGTTCGTGTACACAGTCTTGGTCATCTTG
TTCGCCCGCGGTGTGTTCACGAAGATCTGGCACCATCCGGCCGCTGCCCA
CGAGGCTTGGACTATGGTGGATCTGGCCATATATATACTGAACGTCTTCC
TGACCGTTCTGGCAATAATGCGCGACATCGAGACGGATGCCCTGCTGCAG
ATTATCGAGACGGCCACCAAGGGGCAGTATCTCGACTTCCAGCGTCCACT
GCGCCTCCACCAAATGCTGTTCATCGTAAAGGGCTTCCTGGTGTGCATCA
CCACTCTGCGGCTGTGGAAGGTGCTCCAGTTTGCCTCCGTCTTCCAGCAC
TTCACGCAGACCCTCTTCTCTGCCTGGCGGGCAGTGGCCAGTCTGGGTGT
AATTATTCTGGTAGTCCTCATGGCCATTGGCATTACTTTGGCGGTGCCGA
ATGGAAACAACGCAGTGGTCTTCAGTCACATGGTTCAGTCCGTGGTCACC
TGCATGTGGTACTCAATGGGTTTTAACGGTGACATTCATCCTGCGGATTT
CTTCCACGGAGGTCGTATTCTAGGGATCTTGCTCTACCTAGCACTGGTCT
TCCTCCTGGCGATTATCTTGATGAACGTCTTCGCCTCCGTCATCTATGAC
TACTTCAACGAGACGAGCAGGATCCTAAAGGAGCATTCGAATCGGTCGTC
TATCACCTTCCTGGAATTTCTGCACGTGGAGTATGCGGATCTTTTTGGCG
ATGCCTTTCGATGCCTGCGAAAGACGTACGAATCCCGTGGACATACTGTT
GCCGAGAATGTGGAACTAGAGCTAAATAGGCGGGAACTGATTAAGTTCAA
AAGGGACCTCATAAAGAGCCCGCAGGAGTTGAAAAGGGCACTCCTGACGG
AAGAGCAGCGAAGTGCCGACTACCGGTTGCGCGGAGAGAAGTTGTTCAAG
CTGATGGCTATCCTGAACCTCCAGGTTGAGATCCTCGAGCGAATGGTATT
GGGCGACAAAGATGGCAAACTGCCCACACCACCTGCATCCGACTCCGATC
CCGACGACATGCCGGAAATGTATCGGAAGCGCCGTTGATGATCGCCGTGA
TCGAATGGCAAGTTGATAACCACAAAGGCTTTTCATATTCACGAACTTTG
CTATGTATTATTAACTACTTTGTTTTATGCCGCACGGCATTAATAAATGC
GTTCCAGTCTAAGAAAGAAAAAAAAAAAAAAAAAAAA

AT14535.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG16793-RA 2529 CG16793-RA 160..2527 1..2368 11660 99.4 Plus
CG16793.a 2347 CG16793.a 207..2347 228..2368 10540 99.4 Plus
CG16793.a 2347 CG16793.a 46..207 1..162 795 99.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17332289..17333011 1660..938 3585 99.7 Minus
chr3L 24539361 chr3L 17331500..17332209 2367..1658 3520 99.7 Minus
chr3L 24539361 chr3L 17333579..17334146 568..1 2765 99.1 Minus
chr3L 24539361 chr3L 17333067..17333440 939..566 1825 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:49:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17342839..17343561 1660..938 3585 99.7 Minus
3L 28110227 3L 17342049..17342759 2368..1658 3525 99.7 Minus
3L 28110227 3L 17344129..17344696 568..1 2765 99.1 Minus
3L 28110227 3L 17343617..17343990 939..566 1825 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17335939..17336661 1660..938 3585 99.7 Minus
3L 28103327 3L 17335149..17335859 2368..1658 3525 99.7 Minus
3L 28103327 3L 17337229..17337796 568..1 2765 99.1 Minus
3L 28103327 3L 17336717..17337090 939..566 1825 99.1 Minus
Blast to na_te.dros performed on 2019-03-16 16:47:18 has no hits.

AT14535.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:48:23 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17331500..17332208 1659..2367 99 <- Minus
chr3L 17332291..17333009 940..1658 99 <- Minus
chr3L 17333067..17333438 568..939 99 <- Minus
chr3L 17333580..17334146 1..567 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:05:57 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2211 28..2238 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:49:08 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2211 28..2238 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:46:02 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
brv2-RA 1..2211 28..2238 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:16:17 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2211 28..2238 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:41:39 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
brv2-RA 1..2211 28..2238 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:13:05 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2366 1..2366 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:49:08 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2366 1..2366 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:46:02 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
brv2-RA 1..2367 1..2367 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:16:18 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
CG16793-RA 1..2366 1..2366 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:41:39 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
brv2-RA 1..2367 1..2367 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:23 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17342050..17342758 1659..2367 99 <- Minus
3L 17342841..17343559 940..1658 99 <- Minus
3L 17343617..17343988 568..939 99 <- Minus
3L 17344130..17344696 1..567 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:23 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17342050..17342758 1659..2367 99 <- Minus
3L 17342841..17343559 940..1658 99 <- Minus
3L 17343617..17343988 568..939 99 <- Minus
3L 17344130..17344696 1..567 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:48:23 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17342050..17342758 1659..2367 99 <- Minus
3L 17342841..17343559 940..1658 99 <- Minus
3L 17343617..17343988 568..939 99 <- Minus
3L 17344130..17344696 1..567 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:46:02 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17337230..17337796 1..567 99   Minus
arm_3L 17335150..17335858 1659..2367 99 <- Minus
arm_3L 17335941..17336659 940..1658 99 <- Minus
arm_3L 17336717..17337088 568..939 99 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:50:15 Download gff for AT14535.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17335150..17335858 1659..2367 99 <- Minus
3L 17335941..17336659 940..1658 99 <- Minus
3L 17336717..17337088 568..939 99 <- Minus
3L 17337230..17337796 1..567 99   Minus

AT14535.hyp Sequence

Translation from 1 to 2237

> AT14535.hyp
QQFQRTPVKMNLSSISRKDLTCFGVTTCVVMVCFVLVSIFSGFMHEPQRF
KTMLVTIVLVFFFQYLILEPIRFFIQSIDYATWPQEDPPYRAEEGGPTMD
HIGYLKIRLRSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSYFIALML
MVVLQEDHTNYYNTNNMQRLFWDNTSVTFGLSQVYFIYQVHSYMKITLVE
AFYAQKTNGYEGWWAMEQWQKIGVVRLRQMRPVDCHIGLGKPEWDKKTYA
PEWRLPYHRMHYTEKFWRIYDPFVPAEFEPSFLNGLLLNYDHYGYLLNYP
EVAGYVVLMMSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLF
TLITLRVENSPFGIQLPRVHVDSVSMLGNVETRSNSELLILFVYTVLVIL
FARGVFTKIWHHPAAAHEAWTMVDLAIYILNVFLTVLAIMRDIETDALLQ
IIETATKGQYLDFQRPLRLHQMLFIVKGFLVCITTLRLWKVLQFASVFQH
FTQTLFSAWRAVASLGVIILVVLMAIGITLAVPNGNNAVVFSHMVQSVVT
CMWYSMGFNGDIHPADFFHGGRILGILLYLALVFLLAIILMNVFASVIYD
YFNETSRILKEHSNRSSITFLEFLHVEYADLFGDAFRCLRKTYESRGHTV
AENVELELNRRELIKFKRDLIKSPQELKRALLTEEQRSADYRLRGEKLFK
LMAILNLQVEILERMVLGDKDGKLPTPPASDSDPDDMPEMYRKRR*

AT14535.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
brv2-PA 736 CG16793-PA 1..736 10..745 3855 100 Plus
brv2-PB 714 CG16793-PB 1..714 10..745 3713 97 Plus
brv3-PC 750 CG13762-PC 11..736 23..739 1483 40.9 Plus
brv3-PB 719 CG13762-PB 11..661 23..668 1425 42.6 Plus
brv1-PA 728 CG9472-PA 10..724 23..739 1154 34.9 Plus

AT14535.pep Sequence

Translation from 27 to 2237

> AT14535.pep
MNLSSISRKDLTCFGVTTCVVMVCFVLVSIFSGFMHEPQRFKTMLVTIVL
VFFFQYLILEPIRFFIQSIDYATWPQEDPPYRAEEGGPTMDHIGYLKIRL
RSLRSELLISEGHTNEMLNQKYKHIAGDLLLYGSYFIALMLMVVLQEDHT
NYYNTNNMQRLFWDNTSVTFGLSQVYFIYQVHSYMKITLVEAFYAQKTNG
YEGWWAMEQWQKIGVVRLRQMRPVDCHIGLGKPEWDKKTYAPEWRLPYHR
MHYTEKFWRIYDPFVPAEFEPSFLNGLLLNYDHYGYLLNYPEVAGYVVLM
MSTKINCLKQIEYLRDYSWLDKNTSALFIDLTMYNADANLFTLITLRVEN
SPFGIQLPRVHVDSVSMLGNVETRSNSELLILFVYTVLVILFARGVFTKI
WHHPAAAHEAWTMVDLAIYILNVFLTVLAIMRDIETDALLQIIETATKGQ
YLDFQRPLRLHQMLFIVKGFLVCITTLRLWKVLQFASVFQHFTQTLFSAW
RAVASLGVIILVVLMAIGITLAVPNGNNAVVFSHMVQSVVTCMWYSMGFN
GDIHPADFFHGGRILGILLYLALVFLLAIILMNVFASVIYDYFNETSRIL
KEHSNRSSITFLEFLHVEYADLFGDAFRCLRKTYESRGHTVAENVELELN
RRELIKFKRDLIKSPQELKRALLTEEQRSADYRLRGEKLFKLMAILNLQV
EILERMVLGDKDGKLPTPPASDSDPDDMPEMYRKRR*

AT14535.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24319-PA 749 GF24319-PA 1..734 1..735 1796 47.4 Plus
Dana\GF21928-PA 770 GF21928-PA 11..753 11..736 1351 39.9 Plus
Dana\GF10757-PA 751 GF10757-PA 11..711 14..715 1108 35 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15821-PA 736 GG15821-PA 1..736 1..736 3341 81.8 Plus
Dere\GG12602-PA 749 GG12602-PA 11..744 14..735 1405 40.2 Plus
Dere\GG13405-PA 727 GG13405-PA 26..724 30..730 1125 35.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14403-PA 700 GH14403-PA 6..699 8..712 1251 38.1 Plus
Dgri\GH14404-PA 672 GH14404-PA 8..640 83..712 1239 40.8 Plus
Dgri\GH14405-PA 355 GH14405-PA 2..353 171..532 611 38.7 Plus
Dgri\GH23908-PA 279 GH23908-PA 2..277 245..532 520 39.9 Plus
Dgri\GH11647-PA 808 GH11647-PA 377..797 288..715 163 20.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
brv2-PA 736 CG16793-PA 1..736 1..736 3855 100 Plus
brv2-PB 714 CG16793-PB 1..714 1..736 3713 97 Plus
brv3-PC 750 CG13762-PC 11..736 14..730 1483 40.9 Plus
brv3-PB 719 CG13762-PB 11..661 14..659 1425 42.6 Plus
brv1-PA 728 CG9472-PA 10..724 14..730 1154 34.9 Plus
Pkd2-PA 924 CG6504-PA 497..801 287..594 193 21.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13528-PA 725 GI13528-PA 13..699 16..710 1284 39.1 Plus
Dmoj\GI13527-PA 749 GI13527-PA 18..749 17..734 1161 34.1 Plus
Dmoj\GI23998-PA 717 GI23998-PA 4..705 8..706 1045 32.9 Plus
Dmoj\GI17948-PA 816 GI17948-PA 386..798 288..707 192 21.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20897-PA 742 GL20897-PA 9..741 16..732 1260 35.2 Plus
Dper\GL15493-PA 494 GL15493-PA 2..493 242..736 1208 45.8 Plus
Dper\GL26193-PA 637 GL26193-PA 30..622 33..623 1005 34.8 Plus
Dper\GL20936-PA 698 GL20936-PA 1..306 6..309 531 38.1 Plus
Dper\GL20936-PA 698 GL20936-PA 297..594 431..727 491 36.2 Plus
Dper\GL14773-PA 1108 GL14773-PA 340..659 287..608 167 21 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14155-PA 733 GA14155-PA 10..732 10..736 1712 44.9 Plus
Dpse\GA28227-PA 742 GA28227-PA 9..741 16..732 1264 35.2 Plus
Dpse\GA28635-PA 745 GA28635-PA 1..744 6..733 1229 35.7 Plus
Dpse\GA23663-PA 724 GA23663-PA 30..685 33..689 1082 34 Plus
Dpse\GA24140-PA 806 GA24140-PA 378..792 287..712 164 20.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24341-PA 736 GM24341-PA 1..736 1..736 3619 92.5 Plus
Dsec\GM18868-PA 741 GM18868-PA 2..730 5..729 1404 40.1 Plus
Dsec\GM18537-PA 728 GM18537-PA 26..727 30..730 1047 35.6 Plus
Dsec\GM26807-PA 869 GM26807-PA 442..746 287..594 169 21.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12415-PA 736 GD12415-PA 1..736 1..736 3596 92.1 Plus
Dsim\GD12280-PA 699 GD12280-PA 26..692 30..695 998 35.5 Plus
Dsim\GD23835-PA 897 GD23835-PA 470..774 287..594 170 21.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:43:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11886-PA 637 GJ11886-PA 1..620 98..711 989 37 Plus
Dvir\GJ11887-PA 448 GJ11887-PA 6..434 9..432 805 38.1 Plus
Dvir\GJ11888-PA 272 GJ11888-PA 1..258 483..726 411 37.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18898-PA 737 GK18898-PA 7..729 9..736 1681 45.9 Plus
Dwil\GK16275-PA 723 GK16275-PA 13..720 16..719 1522 43.2 Plus
Dwil\GK19163-PA 741 GK19163-PA 11..634 14..635 1360 40.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22161-PA 735 GE22161-PA 1..735 1..736 3401 84.9 Plus
Dyak\GE16933-PA 628 GE16933-PA 2..613 125..730 1232 41.7 Plus
Dyak\GE22932-PA 726 GE22932-PA 10..722 14..730 1145 36.5 Plus
Dyak\GE22501-PA 323 GE22501-PA 69..319 479..730 296 32 Plus
Dyak\GE18586-PA 909 GE18586-PA 482..890 287..707 175 20.7 Plus