BDGP Sequence Production Resources |
Search the DGRC for AT15442
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 154 |
Well: | 42 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG12446-RA |
Protein status: | AT15442.pep: gold |
Preliminary Size: | 2130 |
Sequenced Size: | 2696 |
Gene | Date | Evidence |
---|---|---|
CG12446 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12446 | 2002-05-18 | Blastp of sequenced clone |
CG12446 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12446 | 2008-04-29 | Release 5.5 accounting |
CG12446 | 2008-08-15 | Release 5.9 accounting |
CG12446 | 2008-12-18 | 5.12 accounting |
2696 bp (2696 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118688
> AT15442.complete GAACTATCGAAACTGAACAATCCCATTTCTTTCCGTTTCACACTCCCATA CTACATTCCGAATGTAAAGCTGAGGAGGACTTCAGATTTGAAGTGAGTCT AAAAACGAACAGCTGCATATAGGACCCCTTCAAATGTGCGCCGCCGTCTG CGTGATGGTCACGGTGCCCACGGAAGCCGAGGAACTGAAACTGTGCCCCA AGCCGCTGGTTGGCGCATCATATTGCTCCAGCTGCGGTGGATGTGTAAGG AGCAGGTGCACTGAGGAACCCAGTGGCGAGGTGTGCGAACGCTGTTGGCG CTTGAGTCAAATAGCCGGGAGCAGTGTGCATAGAGATGCCGTTCCAATGG CCAATACTCTCCAATACAGCACTACGTCTGCACCTATGTCCCAGGGGAGG GCCCTGCAGCTGCTCAATCTTAAGGGGGATGCCTCTTTGGAGAAACTGCT ACGGGCCATTGCCAAAGAGCTGCGATTGGAGAACGTCTTTTGGACGCACG ACATCAGCGGGAGGCAGGTCCAGGCACGCTTCGACCTTCTGCAGGACGAG CGATACGAGAGACTGCTGTGCACGTTGCAAGATTGGGGCGTCGGTGATCG ACCCGGCACCCATGTGTCTGCCCTAACCTGCCTGGAAACCCGGGCTAAGC CCTGCCTGCAGGTACCCAGACAAGACCATGACAATTTCGTGGATCAGCAT CAGGAACATGGAGAGGGTCAGGGCCAGGGTCAGGGCCAGGCCCAGGGCCA GGGCTGGCAGAGCTTCATGGACTCGGTAAGATGCAGGCTGAATGTCAACC AGGTCGTGCGCCAAGTTCGGCGGGATGCCACCCTAACCTTTGACTTCGTG GTGCTGCTTATTGCTGCCGCTCTGCTATCGTGCGTGGGTCTTGTCGAGAA TAGTTTTCTTTTTCTCTCCAGCTCCATGCTGATTTCCCCTTTGATGGGCC CAATCATAGCGGCCATATTCGGTTCAGTGATCGGCGATCGGGACCTGCGA TGGTTGGGTCTGAAGAACGAACTCCTGGGTATAGCTGCGTCTGTGGCTAT TGGATTCTTCTTTGGGGCCATGGTCTGTGGTTTCGGTCACTTTTTCGCGA TTTCCAAGGGACTCACGGAGGAAATCGTCTCACGATGCGACACGCATTCC CTTGCCATCGGAGTATGCACAGCCTTGGCTTCGGGAGCTGCGGGCGCCAT AGCGGTTTTGGGTGGCAATACGGGGTCTCTGGTGGGCGTGGCCATCTCAG CCTCCCTGCTGCCGCCTGCTGTTAATGCCGGACTTCTGTGGGCCCTGGCC GTCGGAGTCCACGTACTGCCGGACGACCATGAGCCCCTGGCCAGCATGGT GAAGCACAGGTCGTACTCCTCTCAACTTTCCGTTGAGCTACTGGTTTGTG CAGCTGTCAGCATGGCCCTCACCCTCCTTAACATAATTTGCGTTTGGCTG ATGGGAACGGTTGTTTTGAGGATTAAGGAAGTGGCTCCAGCGGTTCAGCG ACACCAGAAGTTTTGGCATCATGACATCCGCACAGCACGCGAGGTGGCGC TAGATCCAGTCCTGCAGAGTGCCATAGATCGCCTGGACAAGTCTCAACTG GATTCGGACGCGTCACCTTACCAGCGCGCCTGGTCGCCAGGGCTAGATCG TCAGACCGCCTCGCACACAGGAATTGGAAGCTACGACATTAACCTGTCCT GCAGCAAGGATCAGCCGAACAACTATCACACGGTGCATGGCTTCCAGGAG TTCTGCATCACGCTGCATCGACTTAAGTCTGCACATAAGGTCGCCCCACC ACCGACTATAATGGAGCTGTTTACGCGCGCGCCTCCAAACTCCGACCAGA CCAATATTGGGGGCAGTGACTTCAGCAGCTGCCGCAGTCTGCCGGACATC AGCAGCCATTCCCGTCTCTGGCCACATAAACCACCCAGTGCTATGAGCAT CCAAGGCCTGATCTTTGGTGCAGCCAAGAGCGGGGAACCTGGACCCGCTG TCCCTATGGCAACAAGTTCGAATAGGGAACGCGAGAAGATGAATGTCCAC TGGCGGGAGGAGGAACTGCAGGAGGACCTCGTCCTGAGAAGGGAAATCCT GAACAGCAGGGAGAGCAGTCCGCTCAGAAGGCCCGGACAAGTTCTGATAC CCCTGCCCAGGCTAGAAGGCAATTTCCTGATGAATCGGCCTCTCAGCCTG TTGCCCTACGGCAGGTCAGAGGGAGCGAGCCCCGGGGAAAAGCAAGACGA GTTCCAGGCTTAGCAATGTGCTCAGCTCCAAGTCATATCCTTAAACCTAA CATCACCAGACACCATCAAGAGCTCCGCAAATATCCAAGATGAAGCCTCG AGCTTCGTGTCCAGCTTTGATTACTCGCCGATCCGGCGGCAGTGTCCTTA TTTGCCAACCACTTCAAGCCGCAAGCTCTGACGGTCGTGAAATATCAAAA AAGATGTTTATACGATGAAATATGTATAAGCCAAAGAACAAAATTGTAAC AACCATGGATGGAAAAAAATACATATAAGCCTTAACAGCACGTAAAAGCT GATTTTGCGATGCAGTTCAGTCCAGTTAATTGCCTAATCCCAATAGATAA ACTACCCTATAAAATAAAATGCTTTCCCCGTCAAATCTCAAAATAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 22205307..22207938 | 1..2644 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2130 | 134..2263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2130 | 134..2263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2130 | 134..2263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2130 | 134..2263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2130 | 134..2263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2644 | 1..2644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2644 | 1..2644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2644 | 1..2644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2644 | 1..2644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12446-RA | 1..2644 | 1..2644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22809292..22811935 | 1..2644 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22809292..22811935 | 1..2644 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22809292..22811935 | 1..2644 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 22211128..22213771 | 1..2644 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22794384..22797027 | 1..2644 | 100 | Minus |
Translation from 133 to 2262
> AT15442.hyp MCAAVCVMVTVPTEAEELKLCPKPLVGASYCSSCGGCVRSRCTEEPSGEV CERCWRLSQIAGSSVHRDAVPMANTLQYSTTSAPMSQGRALQLLNLKGDA SLEKLLRAIAKELRLENVFWTHDISGRQVQARFDLLQDERYERLLCTLQD WGVGDRPGTHVSALTCLETRAKPCLQVPRQDHDNFVDQHQEHGEGQGQGQ GQAQGQGWQSFMDSVRCRLNVNQVVRQVRRDATLTFDFVVLLIAAALLSC VGLVENSFLFLSSSMLISPLMGPIIAAIFGSVIGDRDLRWLGLKNELLGI AASVAIGFFFGAMVCGFGHFFAISKGLTEEIVSRCDTHSLAIGVCTALAS GAAGAIAVLGGNTGSLVGVAISASLLPPAVNAGLLWALAVGVHVLPDDHE PLASMVKHRSYSSQLSVELLVCAAVSMALTLLNIICVWLMGTVVLRIKEV APAVQRHQKFWHHDIRTAREVALDPVLQSAIDRLDKSQLDSDASPYQRAW SPGLDRQTASHTGIGSYDINLSCSKDQPNNYHTVHGFQEFCITLHRLKSA HKVAPPPTIMELFTRAPPNSDQTNIGGSDFSSCRSLPDISSHSRLWPHKP PSAMSIQGLIFGAAKSGEPGPAVPMATSSNREREKMNVHWREEELQEDLV LRREILNSRESSPLRRPGQVLIPLPRLEGNFLMNRPLSLLPYGRSEGASP GEKQDEFQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12446-PA | 709 | CG12446-PA | 1..709 | 1..709 | 3695 | 100 | Plus |
CG7384-PA | 605 | CG7384-PA | 5..506 | 3..510 | 971 | 44 | Plus |
CG34109-PC | 800 | CG34109-PC | 156..520 | 102..470 | 508 | 34.6 | Plus |
Translation from 133 to 2262
> AT15442.pep MCAAVCVMVTVPTEAEELKLCPKPLVGASYCSSCGGCVRSRCTEEPSGEV CERCWRLSQIAGSSVHRDAVPMANTLQYSTTSAPMSQGRALQLLNLKGDA SLEKLLRAIAKELRLENVFWTHDISGRQVQARFDLLQDERYERLLCTLQD WGVGDRPGTHVSALTCLETRAKPCLQVPRQDHDNFVDQHQEHGEGQGQGQ GQAQGQGWQSFMDSVRCRLNVNQVVRQVRRDATLTFDFVVLLIAAALLSC VGLVENSFLFLSSSMLISPLMGPIIAAIFGSVIGDRDLRWLGLKNELLGI AASVAIGFFFGAMVCGFGHFFAISKGLTEEIVSRCDTHSLAIGVCTALAS GAAGAIAVLGGNTGSLVGVAISASLLPPAVNAGLLWALAVGVHVLPDDHE PLASMVKHRSYSSQLSVELLVCAAVSMALTLLNIICVWLMGTVVLRIKEV APAVQRHQKFWHHDIRTAREVALDPVLQSAIDRLDKSQLDSDASPYQRAW SPGLDRQTASHTGIGSYDINLSCSKDQPNNYHTVHGFQEFCITLHRLKSA HKVAPPPTIMELFTRAPPNSDQTNIGGSDFSSCRSLPDISSHSRLWPHKP PSAMSIQGLIFGAAKSGEPGPAVPMATSSNREREKMNVHWREEELQEDLV LRREILNSRESSPLRRPGQVLIPLPRLEGNFLMNRPLSLLPYGRSEGASP GEKQDEFQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22161-PA | 707 | GF22161-PA | 12..706 | 12..708 | 2121 | 62.6 | Plus |
Dana\GF14088-PA | 617 | GF14088-PA | 4..515 | 2..510 | 1014 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17508-PA | 697 | GG17508-PA | 14..697 | 14..709 | 2714 | 78.8 | Plus |
Dere\GG10378-PA | 607 | GG10378-PA | 4..506 | 2..510 | 1002 | 43.6 | Plus |
Dere\GG10085-PA | 493 | GG10085-PA | 125..482 | 79..451 | 498 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12868-PA | 648 | GH12868-PA | 45..617 | 89..648 | 1457 | 55.8 | Plus |
Dgri\GH10106-PA | 605 | GH10106-PA | 99..516 | 92..510 | 967 | 47.4 | Plus |
Dgri\GH11075-PA | 138 | GH11075-PA | 1..127 | 332..451 | 236 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12446-PA | 709 | CG12446-PA | 1..709 | 1..709 | 3695 | 100 | Plus |
CG7384-PA | 605 | CG7384-PA | 5..506 | 3..510 | 971 | 44 | Plus |
CG34109-PC | 800 | CG34109-PC | 156..520 | 102..470 | 508 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14964-PA | 714 | GI14964-PA | 63..531 | 87..549 | 1506 | 63.5 | Plus |
Dmoj\GI14424-PA | 626 | GI14424-PA | 117..533 | 92..510 | 954 | 46 | Plus |
Dmoj\GI17594-PA | 288 | GI17594-PA | 153..277 | 334..451 | 224 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26408-PA | 613 | GL26408-PA | 4..534 | 2..540 | 921 | 40.6 | Plus |
Dper\GL16451-PA | 203 | GL16451-PA | 1..139 | 427..563 | 333 | 47.1 | Plus |
Dper\GL16364-PA | 337 | GL16364-PA | 106..321 | 232..445 | 293 | 34.1 | Plus |
Dper\GL16449-PA | 209 | GL16449-PA | 120..203 | 193..276 | 272 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22580-PA | 556 | GA22580-PA | 127..492 | 200..563 | 1127 | 63.2 | Plus |
Dpse\GA20313-PA | 613 | GA20313-PA | 4..534 | 2..540 | 920 | 40.6 | Plus |
Dpse\GA27728-PA | 337 | GA27728-PA | 106..321 | 232..445 | 291 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10058-PA | 695 | GM10058-PA | 1..695 | 1..709 | 3233 | 90.4 | Plus |
Dsec\GM11619-PA | 605 | GM11619-PA | 4..506 | 2..510 | 1006 | 44 | Plus |
Dsec\GM17938-PA | 608 | GM17938-PA | 145..524 | 79..470 | 526 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22247-PA | 605 | GD22247-PA | 4..506 | 2..510 | 999 | 43.8 | Plus |
Dsim\GD24426-PA | 171 | GD24426-PA | 1..171 | 539..709 | 766 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18929-PA | 700 | GJ18929-PA | 1..700 | 1..709 | 1529 | 50.8 | Plus |
Dvir\GJ16264-PA | 596 | GJ16264-PA | 88..507 | 92..510 | 989 | 47 | Plus |
Dvir\GJ17939-PA | 402 | GJ17939-PA | 1..140 | 342..471 | 246 | 41.4 | Plus |
Dvir\GJ17938-PA | 334 | GJ17938-PA | 207..313 | 208..314 | 229 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19837-PA | 775 | GK19837-PA | 1..765 | 1..706 | 1807 | 52.4 | Plus |
Dwil\GK15562-PA | 593 | GK15562-PA | 38..523 | 69..540 | 998 | 41.3 | Plus |
Dwil\GK24010-PA | 317 | GK24010-PA | 140..311 | 102..288 | 266 | 32.6 | Plus |