Clone AT15655 Report

Search the DGRC for AT15655

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:156
Well:55
Vector:pOTB7
Associated Gene/TranscriptMul1-RA
Protein status:AT15655.pep: gold
Preliminary Size:1086
Sequenced Size:1243

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1134 2002-01-01 Sim4 clustering to Release 2
CG1134 2002-04-21 Blastp of sequenced clone
CG1134 2003-01-01 Sim4 clustering to Release 3
CG1134 2008-04-29 Release 5.5 accounting
CG1134 2008-08-15 Release 5.9 accounting
CG1134 2008-12-18 5.12 accounting

Clone Sequence Records

AT15655.complete Sequence

1243 bp (1243 high quality bases) assembled on 2002-04-21

GenBank Submission: AY113263

> AT15655.complete
GTATTTGTAGCCGTTACGAGCAGCGGGAAACACAGCAACACTGAGTAAAC
ATATGTTTTTGTAGCGTAATATAAATAAAATAGCATAACACAAAATGGAA
TTTTTACACGAATCCGTTGCACTGGGCGTGGATCTGCTAATACTTGGCCT
GTGTGCGCGCGAGTACGTGCACTACAAGCGAACTGCCAAGGTGCTGAAGG
CGGCACCACAATACAACATCGATGGAGACCTAAAATCGGTGGTGGAGCGG
CAGCGCGACAAGAAGATACCATATGCGGTAATCCGGGGCACAGTGACGCC
CATCGGGGTGCCACTGAGGAGCTCCCTGGTGCCCAGTGTGAGTGGAGTGC
TGCAGATTGTGAAGCTGCATGAGCACAGGGTAACGCGCGGATTCGCCGGC
TTCTGGACGGAACAACACAAGTTGCTGCACGAATCCGCCAACGAGATGCC
CTTCGAGTTGCGTAACCAGAGCCATGGTGTGGAGATTGTGGACGCCTTGA
GTGCCGCCGTCTTGGACGTGGACGTGGTCTACGACAACTACGAGCCCTCC
AATCTGTCCCTCTTCGACCATGTGTTTGGTTTCTTCTCTGGCGTCCGTCA
GAGGGGATTGCAAACGACGGAGGAGGTGCTCAGAGAAGGCAGCTTCCTGA
CCGCTATTGGTGAACTGGAGTTGGATGGCGATACTCTGCGCATGCAGCCC
TCCAATGAGGGACCGCTCTTCCTGACCACTGCCACCAAGTCCACGCTTAT
TAAGCGGTTCGAAGATGCCAAGACAACGACGATACTCAAGCTGGTTGTGT
GCAGCACCATCTCTGCCATCCTGGTTGCCTTCATTGCCAAGAAACTCTAC
CGAAAACGAAAGCAGGAGCGGGAGGAGGCCAAAATTCGCGAACGCCTGGA
TACGGAGCGTCGGGAGCGGAGGGCGAGGAGTCGTCCTCACACTCTGTCCC
AGGATCAACTCTGCGTGGTGTGCTCCACCAATCCCAAGGAGATTATCCTA
CTGCCATGTGGTCATGTGTGTCTCTGCGAGGACTGTGCCCAGAAAATCTC
CGTCACCTGCCCCGTGTGTCGTGGTAGCATCGTCTCCAAGGCAGCCGCCT
TCATCGCCTAGGAACCAACGAAGATGCCAACAAGATCACCTTGTACCTGT
GTGCGCCAAACTTTTTATTTGTTACAATGCTCATGTACGGCATTTATTTA
AAATTATTGAAAGTCTTGACATCGGAATGAAAAAAAAAAAAAA

AT15655.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG1134-RA 1364 CG1134-RA 33..1269 1..1237 6185 100 Plus
CG11594-RC 2065 CG11594-RC 1922..2065 1237..1094 720 100 Minus
CG11594-RA 2670 CG11594-RA 2527..2670 1237..1094 720 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4021088..4021673 198..783 2930 100 Plus
chr3L 24539361 chr3L 4022205..4022444 990..1229 1200 100 Plus
chr3L 24539361 chr3L 4021732..4021939 784..991 1040 100 Plus
chr3L 24539361 chr3L 4020827..4021026 1..200 1000 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:50:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:49:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4021702..4022287 198..783 2930 100 Plus
3L 28110227 3L 4022819..4023066 990..1237 1240 100 Plus
3L 28110227 3L 4022346..4022553 784..991 1040 100 Plus
3L 28110227 3L 4021441..4021640 1..200 1000 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4021702..4022287 198..783 2930 100 Plus
3L 28103327 3L 4022819..4023066 990..1237 1240 100 Plus
3L 28103327 3L 4022346..4022553 784..991 1040 100 Plus
3L 28103327 3L 4021441..4021640 1..200 1000 100 Plus
Blast to na_te.dros performed on 2019-03-16 15:49:53 has no hits.

AT15655.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:50:41 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4020827..4021025 1..199 100 -> Plus
chr3L 4021090..4021673 200..783 100 -> Plus
chr3L 4021732..4021939 784..991 100 -> Plus
chr3L 4022207..4022444 992..1229 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:07:21 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 1..1017 95..1111 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:01:23 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 1..1017 95..1111 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:55:30 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 1..1017 95..1111 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:54:45 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 1..1017 95..1111 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:55:12 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 1..1017 95..1111 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:42:45 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 3..1231 1..1229 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:01:23 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 3..1231 1..1229 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:55:30 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 1..1213 17..1229 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:54:45 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG1134-RA 3..1231 1..1229 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:55:12 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
Mul1-RA 1..1213 17..1229 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:50:41 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022346..4022553 784..991 100 -> Plus
3L 4022821..4023058 992..1229 100   Plus
3L 4021441..4021639 1..199 100 -> Plus
3L 4021704..4022287 200..783 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:50:41 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022346..4022553 784..991 100 -> Plus
3L 4022821..4023058 992..1229 100   Plus
3L 4021441..4021639 1..199 100 -> Plus
3L 4021704..4022287 200..783 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:50:41 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4022346..4022553 784..991 100 -> Plus
3L 4022821..4023058 992..1229 100   Plus
3L 4021441..4021639 1..199 100 -> Plus
3L 4021704..4022287 200..783 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:55:30 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4021441..4021639 1..199 100 -> Plus
arm_3L 4021704..4022287 200..783 100 -> Plus
arm_3L 4022346..4022553 784..991 100 -> Plus
arm_3L 4022821..4023058 992..1229 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:26:58 Download gff for AT15655.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4021704..4022287 200..783 100 -> Plus
3L 4022346..4022553 784..991 100 -> Plus
3L 4022821..4023058 992..1229 100   Plus
3L 4021441..4021639 1..199 100 -> Plus

AT15655.pep Sequence

Translation from 94 to 1110

> AT15655.pep
MEFLHESVALGVDLLILGLCAREYVHYKRTAKVLKAAPQYNIDGDLKSVV
ERQRDKKIPYAVIRGTVTPIGVPLRSSLVPSVSGVLQIVKLHEHRVTRGF
AGFWTEQHKLLHESANEMPFELRNQSHGVEIVDALSAAVLDVDVVYDNYE
PSNLSLFDHVFGFFSGVRQRGLQTTEEVLREGSFLTAIGELELDGDTLRM
QPSNEGPLFLTTATKSTLIKRFEDAKTTTILKLVVCSTISAILVAFIAKK
LYRKRKQEREEAKIRERLDTERRERRARSRPHTLSQDQLCVVCSTNPKEI
ILLPCGHVCLCEDCAQKISVTCPVCRGSIVSKAAAFIA*

AT15655.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25023-PA 338 GF25023-PA 1..338 1..338 1498 85.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15177-PA 338 GG15177-PA 1..338 1..338 1621 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15008-PA 338 GH15008-PA 1..338 1..338 1454 82.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-PB 338 CG1134-PB 1..338 1..338 1723 100 Plus
Mul1-PA 338 CG1134-PA 1..338 1..338 1723 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13170-PA 338 GI13170-PA 1..338 1..338 1467 82.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16061-PA 338 GL16061-PA 1..338 1..338 1384 77.8 Plus
Dper\GL15650-PA 340 GL15650-PA 1..340 1..338 1183 67.4 Plus
Dper\GL22321-PA 221 GL22321-PA 1..206 1..206 921 81.6 Plus
Dper\GL22322-PA 197 GL22322-PA 1..182 25..206 822 82.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10932-PA 338 GA10932-PA 1..338 1..338 1387 77.5 Plus
Dpse\GA26072-PA 340 GA26072-PA 1..340 1..338 1208 70 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14608-PA 338 GM14608-PA 1..338 1..338 1739 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13798-PA 338 GD13798-PA 1..338 1..338 1749 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11946-PA 338 GJ11946-PA 1..338 1..338 1467 82 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20428-PA 338 GK20428-PA 1..338 1..338 1517 85.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21396-PA 338 GE21396-PA 1..338 1..338 1644 95.6 Plus

AT15655.hyp Sequence

Translation from 94 to 1110

> AT15655.hyp
MEFLHESVALGVDLLILGLCAREYVHYKRTAKVLKAAPQYNIDGDLKSVV
ERQRDKKIPYAVIRGTVTPIGVPLRSSLVPSVSGVLQIVKLHEHRVTRGF
AGFWTEQHKLLHESANEMPFELRNQSHGVEIVDALSAAVLDVDVVYDNYE
PSNLSLFDHVFGFFSGVRQRGLQTTEEVLREGSFLTAIGELELDGDTLRM
QPSNEGPLFLTTATKSTLIKRFEDAKTTTILKLVVCSTISAILVAFIAKK
LYRKRKQEREEAKIRERLDTERRERRARSRPHTLSQDQLCVVCSTNPKEI
ILLPCGHVCLCEDCAQKISVTCPVCRGSIVSKAAAFIA*

AT15655.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Mul1-PB 338 CG1134-PB 1..338 1..338 1723 100 Plus
Mul1-PA 338 CG1134-PA 1..338 1..338 1723 100 Plus