Clone AT15826 Report

Search the DGRC for AT15826

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:158
Well:26
Vector:pOTB7
Associated Gene/TranscriptCG30393-RA
Protein status:AT15826.pep: gold
Preliminary Size:1993
Sequenced Size:1237

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15662 2002-01-01 Sim4 clustering to Release 2
CG30393 2002-01-09 Blastp of sequenced clone
CG30393 2003-01-01 Sim4 clustering to Release 3
CG30393 2008-04-29 Release 5.5 accounting
CG30393 2008-08-15 Release 5.9 accounting
CG30393 2008-12-18 5.12 accounting

Clone Sequence Records

AT15826.complete Sequence

1237 bp (1237 high quality bases) assembled on 2002-01-09

GenBank Submission: AY075215

> AT15826.complete
CGAATAAGTCGGACGGGTTCGTCGTTATTAGAGAAGGAGGTATATATATA
CACACTAGTTAATCATGGAAACAACCGCTCAGCTGCAGCAATTGAAACCC
CAACAGAGCGTCATGTCGCACGTCACGGTCACCGAGAGTGATGCCGAGTT
TGCGATCTTGAATCTGGATTGCAACGAAGGTTTGGAGAGCTCGGTGACCA
AGATTCTGGTGGCCATCGAAGAGATGTTCTGCAGTTACTTTGAGGATCTC
AAGAAGGAGCTGGAACTGCAGAAGATGGCGGCACTGACCTTGAATCAGCT
GACCCAACGTTACAGGATCAACACGAAGGTGGACACGAGCTGCACGTGTC
CGCAGATCTATGAGATCGAATCGGATGATGCGATCATTAACAAATACTAC
ATCTACTACCAGGTGATAGCCTGTTCCAACAATAACCAGGGTTGGGTCAT
CCACAACATGCGCCCCTATGTTCTCCTCTTTCGTCGAGAGTGCGCCAAGT
TGAATCTGAACGAGGATAGTCCCTTCATCATGGGTGACGCTTTCCACAAG
CCAATCAAGTTCTTCATCGACTTGGTGGAGGAGCTCTTCGCCTACTTCTA
CAGTGGACACGTACAGTTCGACTGCGCTGCCCACATGTTGGATCCCTTGG
ACTTGAACAGCATCGAGTACTATCAGAAGCTATTGGAACCCAATGAGGAT
TTCGCAAATTACTTCAAGTACAACATGAGCTTCTGCAAGTGCCTGCGTAT
GCCGCGCCGTTGTCCTGCCCACGAGTATCCGCAGGTGAAAGAGGACTTTA
ACGCCACCTTTGTCAATCAGGCCAAGAAGAAGCGGTGTGCCAGGCGATGC
GAAAAGATGGCCGAGGCCGAGAGCAATTTACTGGATCGAAAGAAGTCCAT
AGTTAGACTCCAACGTCCCAGTGAGATGTCTGGCATAAGCACCGGTCAGG
AATTAGACCAGGACAACGAAAGGGAACTGAAGAGGATCTCTAGACACCAA
CGTCGCAGTGAGAGGTCTATAATAAGTATTACTAAGGAAGATTACCATAC
TCCTCTGCCCGACAACCGACACGAGCTAACTGTAAAGGATTCAGTAATCA
GATGGTCGGTGAACCCACAAATTCTCTGAAAGTATGATAAGTTTTTAAAT
TTTGTAAGCAGTTACGTTTATTTTATATGAGGTGTATAGAATTTAATAAA
TTGCCTACTGATTTCCAAAAAAAAAAAAAAAAAAAAA

AT15826.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-RA 1216 CG30393-RA 1..1216 1..1216 6080 100 Plus
CG30391-RA 1504 CG30391-RA 286..780 253..747 1020 80.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17152858..17154073 1216..1 5960 99.3 Minus
chr2R 21145070 chr2R 17152057..17152610 747..194 1045 79.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:50:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21266363..21267579 1217..1 6085 100 Minus
2R 25286936 2R 21265563..21266116 747..194 1030 79.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21267562..21268778 1217..1 6085 100 Minus
2R 25260384 2R 21266762..21267256 747..253 1020 80.4 Minus
Blast to na_te.dros performed on 2019-03-16 04:51:41 has no hits.

AT15826.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:52:19 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17152858..17154073 1..1216 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:07:35 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 65..1129 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:53:59 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 65..1129 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:44:01 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 65..1129 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:19:08 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 65..1129 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:52:41 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1065 65..1129 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:17:21 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1216 1..1216 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:53:59 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1216 1..1216 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:01 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1216 1..1216 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:19:08 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1216 1..1216 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:52:41 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
CG30393-RA 1..1216 1..1216 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:19 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21266364..21267579 1..1216 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:19 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21266364..21267579 1..1216 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:52:19 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21266364..21267579 1..1216 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:01 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17153869..17155084 1..1216 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:53:26 Download gff for AT15826.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21267563..21268778 1..1216 100   Minus

AT15826.hyp Sequence

Translation from 64 to 1128

> AT15826.hyp
METTAQLQQLKPQQSVMSHVTVTESDAEFAILNLDCNEGLESSVTKILVA
IEEMFCSYFEDLKKELELQKMAALTLNQLTQRYRINTKVDTSCTCPQIYE
IESDDAIINKYYIYYQVIACSNNNQGWVIHNMRPYVLLFRRECAKLNLNE
DSPFIMGDAFHKPIKFFIDLVEELFAYFYSGHVQFDCAAHMLDPLDLNSI
EYYQKLLEPNEDFANYFKYNMSFCKCLRMPRRCPAHEYPQVKEDFNATFV
NQAKKKRCARRCEKMAEAESNLLDRKKSIVRLQRPSEMSGISTGQELDQD
NERELKRISRHQRRSERSIISITKEDYHTPLPDNRHELTVKDSVIRWSVN
PQIL*

AT15826.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 354 CG30393-PA 1..354 1..354 1864 100 Plus
CG30391-PA 338 CG30391-PA 1..333 1..328 927 55.2 Plus
CG31910-PA 262 CG31910-PA 44..242 39..234 300 31.7 Plus

AT15826.pep Sequence

Translation from 64 to 1128

> AT15826.pep
METTAQLQQLKPQQSVMSHVTVTESDAEFAILNLDCNEGLESSVTKILVA
IEEMFCSYFEDLKKELELQKMAALTLNQLTQRYRINTKVDTSCTCPQIYE
IESDDAIINKYYIYYQVIACSNNNQGWVIHNMRPYVLLFRRECAKLNLNE
DSPFIMGDAFHKPIKFFIDLVEELFAYFYSGHVQFDCAAHMLDPLDLNSI
EYYQKLLEPNEDFANYFKYNMSFCKCLRMPRRCPAHEYPQVKEDFNATFV
NQAKKKRCARRCEKMAEAESNLLDRKKSIVRLQRPSEMSGISTGQELDQD
NERELKRISRHQRRSERSIISITKEDYHTPLPDNRHELTVKDSVIRWSVN
PQIL*

AT15826.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12111-PA 349 GF12111-PA 13..275 6..266 816 56.7 Plus
Dana\GF14483-PA 249 GF14483-PA 47..229 55..234 234 30.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:30:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20790-PA 365 GG20790-PA 1..360 1..354 1479 78.1 Plus
Dere\GG20791-PA 323 GG20791-PA 1..311 1..305 883 55.9 Plus
Dere\GG23587-PA 262 GG23587-PA 44..242 39..234 279 31.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:30:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20032-PA 333 GH20032-PA 17..262 21..266 520 41.9 Plus
Dgri\GH10791-PA 235 GH10791-PA 19..216 40..234 279 31.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG30393-PA 354 CG30393-PA 1..354 1..354 1864 100 Plus
CG30391-PA 338 CG30391-PA 1..333 1..328 927 55.2 Plus
CG31910-PA 262 CG31910-PA 44..242 39..234 300 31.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:30:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19210-PA 339 GI19210-PA 39..260 37..264 445 38.2 Plus
Dmoj\GI17302-PA 236 GI17302-PA 20..216 41..234 291 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10759-PA 341 GL10759-PA 18..329 14..314 681 46.1 Plus
Dper\GL15157-PA 226 GL15157-PA 4..208 90..292 535 50.5 Plus
Dper\GL25964-PA 254 GL25964-PA 38..235 41..235 249 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15812-PA 341 GA15812-PA 18..329 14..314 676 45.7 Plus
Dpse\GA22788-PA 248 GA22788-PA 21..237 18..233 643 56.2 Plus
Dpse\GA16557-PA 254 GA16557-PA 38..235 41..235 255 29.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15736-PA 360 GM15736-PA 1..355 1..354 1791 93.2 Plus
Dsec\GM15737-PA 365 GM15737-PA 1..330 1..352 946 53.8 Plus
Dsec\GM13880-PA 262 GM13880-PA 44..242 39..234 288 31.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25213-PA 360 GD25213-PA 1..355 1..354 1804 93.8 Plus
Dsim\GD25214-PA 365 GD25214-PA 1..343 1..338 950 54.8 Plus
Dsim\GD22546-PA 262 GD22546-PA 44..242 39..234 279 30.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20280-PA 358 GJ20280-PA 44..272 36..266 517 45.9 Plus
Dvir\GJ15702-PA 236 GJ15702-PA 20..216 41..234 295 35 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15800-PA 313 GK15800-PA 12..250 22..261 587 47.1 Plus
Dwil\GK24215-PA 239 GK24215-PA 23..239 41..253 266 30 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13728-PA 367 GE13728-PA 1..362 1..354 1474 76.5 Plus
Dyak\GE13729-PA 327 GE13729-PA 1..296 1..289 904 57.8 Plus
Dyak\GE18408-PA 261 GE18408-PA 43..241 39..234 269 30.2 Plus