BDGP Sequence Production Resources |
Search the DGRC for AT16061
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 160 |
Well: | 61 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15450-RA |
Protein status: | AT16061.pep: gold |
Preliminary Size: | 1224 |
Sequenced Size: | 1508 |
Gene | Date | Evidence |
---|---|---|
CG15450 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15450 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15450 | 2003-08-12 | Blastp of sequenced clone |
CG15450 | 2008-04-29 | Release 5.5 accounting |
CG15450 | 2008-08-15 | Release 5.9 accounting |
CG15450 | 2008-12-18 | 5.12 accounting |
1508 bp (1508 high quality bases) assembled on 2003-08-12
GenBank Submission: BT011163
> AT16061.complete GAAACGTCAAAGTCAATAAGCACAAAAATTTCGAAGGCAGTAGGTTTTTT CGCTTCCTTTACCGAGCCATTACAACATACAATCAGGCGGATCAGACAGA CGACGACATCGAAATCGAAACGTGGCTACAACAGCTAGCCATGTTAATTC AACTGGTCTTCCTGGGCATCCTATTGTGGGCGTCCTTCTTTTGGCTGCAG TGCCGCTACCTGGATGTCCTGGAACTCCTCTTCGCCTGGATAGGCAATCA GTTGGCGGAAACTCGCAGGAGGCGAGCTCGCGAAGAACGGTGCCGCCTGG GCAAAAAGTGGGCGGTCGGAAATAAGGGCGATGGCATGGAGAAGCTGCTC TCGCCGCCGATCAAGAATCGTCTCAATATCCGAGTGGAGCAGTGCTGCGA CTTCATAACCGCCGGCTTGGGCTTGGTGCTCGAGGACGACGTGACCCAGA GGTTTGTGGCCCCACCTTCGCCAGCTGGGGAATGGAATCTGCTGACCCGC AACCTTCGTCAGAGGAATCGATACCTCAGCTGGCGTTTAAGGACGGTCTG GCTGCTGGGCTGGGTTGTACGCTACGGACTGCTTTTGCCCTTCAGGACCA TTGGCTGCTGGCTGTGCCTGTTCATGATCAGTGGAGTCTCAATGCTGCTG GGTCACATTCCCGACTGGTGCTTCAAGAAAAAGTTGGTGGAGCTGGTATT GCGGCAGTGCTTCCGAATCACGGCCGCCTGCCTGCCGATGATCCGCAGAT TCCACAACACGGAGTATCGGCCCACCAAGGGCATCTGTGTGTGCAATCAC ACGAGCCCCTTAGACGTCCTGGTGCTGATGTGCGATGCCAACTACTCGCT GACGGGCCAGGTTCACACCGGCATCCTGGGCGTCCTGCAGCGCGCCCTGT CGAGGGTCTCCCACCACATGTGGTTCGACCGCAAGGAACTGGCCGATCGT GAGGCTCTGGGTCTGGTGCTCCGCCTACACTGCTCCATGAAGGATCGGCC GCCGGTCCTGCTCTTCCCCGAGGGCACTTGCATCAACAACACCGCCGTAA TGCAGTTCAAAAAGGGTAGCTTCGCGGTCAGCGACGTCGTTCATCCAGTG GCCATTCGATACGATCGCCGATTCGGCGAGGCCTATTGGGACAGCACCCG TTACTCTATGCTCAGATACATGCTGATGGTGGTCAGCTCGTGGTGCATTT GCTGCGATGTTTGGTACATGCCGGCACTCAGCCGGTGCAACGACGAGTCC CCAGTAGAGTTTTCGAATCGAGTGAAGGCCGCAATCGCCGCCCAGGCGAA TATCGATGATCTGCCCTGGGACGGAAACCTAAAACGCTGGAGTCCCGTCA GGGACTGGCAATAGTTCAAGCATAGCTTAGGTTCTTACCTTGGCTATTTC ATATCGCCGTTTGCAATACCGTACGCTGTTGGTATATTGATTGTATGACC CTTTTGATACTAGTAAATCGATCGATATATTTTAGAGAGCAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15450-RA | 1756 | CG15450-RA | 73..1566 | 1..1494 | 7470 | 100 | Plus |
CG3209-RB | 2043 | CG3209-RB | 1410..1553 | 1002..1145 | 240 | 77.7 | Plus |
CG3209-RC | 2089 | CG3209-RC | 1413..1556 | 1002..1145 | 240 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20689607..20690960 | 137..1490 | 6770 | 100 | Plus |
chrX | 22417052 | chrX | 20687458..20687595 | 1..138 | 690 | 100 | Plus |
chr2R | 21145070 | chr2R | 19958860..19958964 | 1002..1106 | 210 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3522..3620 | 1466..1365 | 115 | 59.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20687458..20687595 | 1..138 | 100 | -> | Plus |
chrX | 20689609..20690960 | 139..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1224 | 141..1364 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1224 | 141..1364 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1224 | 141..1364 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1224 | 141..1364 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1224 | 141..1364 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1490 | 1..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1490 | 1..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1490 | 1..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1490 | 1..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15450-RA | 1..1490 | 1..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20822146..20822283 | 1..138 | 100 | -> | Plus |
X | 20824290..20825641 | 139..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20822146..20822283 | 1..138 | 100 | -> | Plus |
X | 20824290..20825641 | 139..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20822146..20822283 | 1..138 | 100 | -> | Plus |
X | 20824290..20825641 | 139..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20693173..20693310 | 1..138 | 100 | -> | Plus |
arm_X | 20695317..20696668 | 139..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20809382..20810733 | 139..1490 | 100 | Plus | |
X | 20807238..20807375 | 1..138 | 100 | -> | Plus |
Translation from 2 to 1363
> AT16061.hyp NVKVNKHKNFEGSRFFRFLYRAITTYNQADQTDDDIEIETWLQQLAMLIQ LVFLGILLWASFFWLQCRYLDVLELLFAWIGNQLAETRRRRAREERCRLG KKWAVGNKGDGMEKLLSPPIKNRLNIRVEQCCDFITAGLGLVLEDDVTQR FVAPPSPAGEWNLLTRNLRQRNRYLSWRLRTVWLLGWVVRYGLLLPFRTI GCWLCLFMISGVSMLLGHIPDWCFKKKLVELVLRQCFRITAACLPMIRRF HNTEYRPTKGICVCNHTSPLDVLVLMCDANYSLTGQVHTGILGVLQRALS RVSHHMWFDRKELADREALGLVLRLHCSMKDRPPVLLFPEGTCINNTAVM QFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYSMLRYMLMVVSSWCIC CDVWYMPALSRCNDESPVEFSNRVKAAIAAQANIDDLPWDGNLKRWSPVR DWQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15450-PA | 407 | CG15450-PA | 1..407 | 47..453 | 2215 | 100 | Plus |
CG3209-PB | 458 | CG3209-PB | 113..442 | 121..453 | 909 | 47.7 | Plus |
CG3209-PC | 459 | CG3209-PC | 113..443 | 121..453 | 848 | 45.8 | Plus |
CG3209-PD | 537 | CG3209-PD | 284..521 | 216..453 | 739 | 54.2 | Plus |
CG3209-PE | 380 | CG3209-PE | 185..364 | 269..453 | 548 | 54.1 | Plus |
CG3209-PD | 537 | CG3209-PD | 113..273 | 121..283 | 302 | 35.4 | Plus |
Translation from 140 to 1363
> AT16061.pep MLIQLVFLGILLWASFFWLQCRYLDVLELLFAWIGNQLAETRRRRAREER CRLGKKWAVGNKGDGMEKLLSPPIKNRLNIRVEQCCDFITAGLGLVLEDD VTQRFVAPPSPAGEWNLLTRNLRQRNRYLSWRLRTVWLLGWVVRYGLLLP FRTIGCWLCLFMISGVSMLLGHIPDWCFKKKLVELVLRQCFRITAACLPM IRRFHNTEYRPTKGICVCNHTSPLDVLVLMCDANYSLTGQVHTGILGVLQ RALSRVSHHMWFDRKELADREALGLVLRLHCSMKDRPPVLLFPEGTCINN TAVMQFKKGSFAVSDVVHPVAIRYDRRFGEAYWDSTRYSMLRYMLMVVSS WCICCDVWYMPALSRCNDESPVEFSNRVKAAIAAQANIDDLPWDGNLKRW SPVRDWQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21703-PA | 440 | GF21703-PA | 1..440 | 1..407 | 1608 | 70 | Plus |
Dana\GF11367-PA | 539 | GF11367-PA | 286..523 | 170..407 | 759 | 53.8 | Plus |
Dana\GF22630-PA | 558 | GF22630-PA | 102..346 | 152..383 | 177 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19698-PA | 439 | GG19698-PA | 1..439 | 1..407 | 1862 | 83.6 | Plus |
Dere\GG22933-PA | 537 | GG22933-PA | 284..521 | 170..407 | 755 | 54.2 | Plus |
Dere\GG18969-PA | 474 | GG18969-PA | 77..326 | 147..383 | 182 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17744-PA | 405 | GH17744-PA | 27..405 | 23..407 | 1169 | 59.5 | Plus |
Dgri\GH21717-PA | 537 | GH21717-PA | 286..523 | 170..407 | 755 | 54.2 | Plus |
Dgri\GH12406-PA | 556 | GH12406-PA | 95..344 | 147..383 | 173 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15450-PA | 407 | CG15450-PA | 1..407 | 1..407 | 2215 | 100 | Plus |
Gpat4-PB | 458 | CG3209-PB | 113..442 | 75..407 | 909 | 47.7 | Plus |
Gpat4-PC | 459 | CG3209-PC | 113..443 | 75..407 | 848 | 45.8 | Plus |
Gpat4-PD | 537 | CG3209-PD | 284..521 | 170..407 | 739 | 54.2 | Plus |
Gpat4-PE | 380 | CG3209-PE | 185..364 | 223..407 | 548 | 54.1 | Plus |
Gpat4-PD | 537 | CG3209-PD | 113..273 | 75..237 | 302 | 35.4 | Plus |
LPCAT-PB | 533 | CG32699-PB | 74..307 | 147..369 | 182 | 24.5 | Plus |
Gpat4-PE | 380 | CG3209-PE | 113..193 | 75..158 | 176 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18864-PA | 538 | GI18864-PA | 279..524 | 163..407 | 733 | 52 | Plus |
Dmoj\GI18864-PA | 538 | GI18864-PA | 115..275 | 75..237 | 286 | 34.1 | Plus |
Dmoj\GI15857-PA | 554 | GI15857-PA | 95..349 | 147..388 | 176 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15809-PA | 417 | GL15809-PA | 1..417 | 1..406 | 1254 | 57.2 | Plus |
Dper\GL11661-PA | 531 | GL11661-PA | 280..517 | 170..407 | 750 | 53.8 | Plus |
Dper\GL13112-PA | 512 | GL13112-PA | 88..313 | 147..361 | 170 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13739-PA | 417 | GA13739-PA | 1..417 | 1..406 | 1254 | 57.4 | Plus |
Dpse\GA16670-PA | 531 | GA16670-PA | 280..517 | 170..407 | 750 | 53.8 | Plus |
Dpse\GA23062-PA | 512 | GA23062-PA | 88..313 | 147..361 | 170 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18300-PA | 537 | GM18300-PA | 284..521 | 170..407 | 755 | 54.2 | Plus |
Dsec\GM23052-PA | 281 | GM23052-PA | 1..211 | 1..213 | 707 | 73.9 | Plus |
Dsec\GM23052-PA | 281 | GM23052-PA | 144..281 | 270..407 | 650 | 89.1 | Plus |
Dsec\GM11357-PA | 452 | GM11357-PA | 74..323 | 147..383 | 182 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24693-PA | 435 | GD24693-PA | 29..435 | 1..407 | 2096 | 96.6 | Plus |
Dsim\GD11832-PA | 537 | GD11832-PA | 284..521 | 170..407 | 756 | 54.2 | Plus |
Dsim\GD16057-PA | 361 | GD16057-PA | 28..232 | 189..383 | 164 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19255-PA | 425 | GJ19255-PA | 5..425 | 2..407 | 1203 | 59.1 | Plus |
Dvir\GJ20434-PA | 537 | GJ20434-PA | 279..523 | 163..407 | 754 | 52.2 | Plus |
Dvir\GJ19019-PA | 439 | GJ19019-PA | 52..301 | 147..383 | 157 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19819-PA | 326 | GK19819-PA | 1..326 | 82..407 | 1199 | 70.9 | Plus |
Dwil\GK21924-PA | 536 | GK21924-PA | 285..522 | 170..407 | 754 | 53.4 | Plus |
Dwil\GK10139-PA | 552 | GK10139-PA | 69..294 | 147..361 | 171 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17896-PA | 407 | GE17896-PA | 1..407 | 1..407 | 1957 | 89.7 | Plus |
Dyak\GE14370-PA | 537 | GE14370-PA | 284..521 | 170..407 | 756 | 54.2 | Plus |
Dyak\GE15443-PA | 455 | GE15443-PA | 77..326 | 147..383 | 182 | 24.1 | Plus |