BDGP Sequence Production Resources |
Search the DGRC for AT16129
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 161 |
Well: | 29 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG17300-RA |
Protein status: | AT16129.pep: gold |
Sequenced Size: | 723 |
Gene | Date | Evidence |
---|---|---|
CG11262 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17300 | 2004-07-27 | Blastp of sequenced clone |
CG17300 | 2008-04-29 | Release 5.5 accounting |
CG17300 | 2008-08-15 | Release 5.9 accounting |
CG17300 | 2008-12-18 | 5.12 accounting |
723 bp (723 high quality bases) assembled on 2004-07-27
GenBank Submission: BT015306
> AT16129.complete TTTTTTTTTTCTGTCACTTTTCTAAACTTTCACTTGCAAAATTACTATCA TTCAATTCATCCTTAATCCATATACTTACCATTTTACGGCAGTTAATTAA ACAAAAATTCAATACAACTTTCTTTAGAATGTTCTCGAGATTAGCCTTAC GTCCTTTGACTGTGGCCACATCTCGTTCGGCTACCACCCATTCCGCCCAA GGACTAAGTAGGCTCCCTGGGCATGGAAGTCCCGGAAAGGTTCGCCCGGG TTTCCCGTCCGACAATTGGGTTAAAGGACCCATGGGCGTCGGCCTGTTGG CATATATCTGTTCCGGAGACTGTTGCGCCATTAAGCACGAGCACAGCGGC CTATCCTTGGGCATCATGGAAGATGGCTACTACAGCAGTGGAATCACCAT CGGTATCCTGACCACATTTGCTGTGATTAGGCTTCTTCCAGCGATTGTAA AGTGGGCTGATAGCGAGATTATTAAAATTGAGTCCGAGTACGAAAAGAGT CGTGAAACTAAGATCAAGGTCCTATCAATCTCGCCCTCGAACGGAAATAA GGATCCTAGCAAGGATAATGCCGATCAAAACGTGTAGTCGATTTGTTGTA TTACTTATTTCAATTTGTGAACACATGTCCGTGTAAAAAATAAAAATTTG GGTGTAAGAGGAGCTCTGGTTGAAGATGTAATTAAACAACTATGAACAAA CAACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17300-RA | 720 | CG17300-RA | 23..720 | 7..704 | 3490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 13077032..13077363 | 473..142 | 1660 | 100 | Minus |
chr3L | 24539361 | chr3L | 13076675..13076905 | 704..474 | 1155 | 100 | Minus |
chr3L | 24539361 | chr3L | 13077439..13077576 | 144..7 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 13086744..13087075 | 473..142 | 1660 | 100 | Minus |
3L | 28110227 | 3L | 13086386..13086617 | 705..474 | 1160 | 100 | Minus |
3L | 28110227 | 3L | 13087151..13087288 | 144..7 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 13079844..13080175 | 473..142 | 1660 | 100 | Minus |
3L | 28103327 | 3L | 13079486..13079717 | 705..474 | 1160 | 100 | Minus |
3L | 28103327 | 3L | 13080251..13080388 | 144..7 | 690 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 13076675..13076905 | 474..704 | 100 | <- | Minus |
chr3L | 13077032..13077360 | 145..473 | 100 | <- | Minus |
chr3L | 13077439..13077572 | 11..144 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 1..459 | 129..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 1..459 | 129..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 1..459 | 129..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 1..459 | 129..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 1..459 | 129..587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 6..699 | 11..704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 6..699 | 11..704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 6..699 | 11..704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 6..699 | 11..704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17300-RA | 6..699 | 11..704 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13086387..13086617 | 474..704 | 100 | <- | Minus |
3L | 13086744..13087072 | 145..473 | 100 | <- | Minus |
3L | 13087151..13087284 | 11..144 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13086387..13086617 | 474..704 | 100 | <- | Minus |
3L | 13086744..13087072 | 145..473 | 100 | <- | Minus |
3L | 13087151..13087284 | 11..144 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13086387..13086617 | 474..704 | 100 | <- | Minus |
3L | 13086744..13087072 | 145..473 | 100 | <- | Minus |
3L | 13087151..13087284 | 11..144 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 13079844..13080172 | 145..473 | 100 | <- | Minus |
arm_3L | 13080251..13080384 | 11..144 | 100 | Minus | |
arm_3L | 13079487..13079717 | 474..704 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13079487..13079717 | 474..704 | 100 | <- | Minus |
3L | 13079844..13080172 | 145..473 | 100 | <- | Minus |
3L | 13080251..13080384 | 11..144 | 100 | Minus |
Translation from 11 to 586
> AT16129.hyp CHFSKLSLAKLLSFNSSLIHILTILRQLIKQKFNTTFFRMFSRLALRPLT VATSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNWVKGPMGVGLLAYIC SGDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVIRLLPAIVKWAD SEIIKIESEYEKSRETKIKVLSISPSNGNKDPSKDNADQNV*
Translation from 128 to 586
> AT16129.pep MFSRLALRPLTVATSRSATTHSAQGLSRLPGHGSPGKVRPGFPSDNWVKG PMGVGLLAYICSGDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVI RLLPAIVKWADSEIIKIESEYEKSRETKIKVLSISPSNGNKDPSKDNADQ NV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24674-PA | 245 | GF24674-PA | 1..139 | 1..133 | 217 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13783-PA | 151 | GG13783-PA | 1..142 | 1..142 | 604 | 81.7 | Plus |
Dere\GG15409-PA | 243 | GG15409-PA | 1..137 | 1..133 | 222 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15429-PA | 246 | GH15429-PA | 1..149 | 1..142 | 211 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17300-PA | 152 | CG17300-PA | 1..152 | 1..152 | 789 | 100 | Plus |
ATPsynB-PA | 243 | CG8189-PA | 1..137 | 1..133 | 245 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13031-PA | 245 | GI13031-PA | 1..148 | 1..142 | 222 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16292-PA | 245 | GL16292-PA | 1..139 | 1..133 | 210 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20881-PA | 245 | GA20881-PA | 1..139 | 1..133 | 210 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24609-PA | 152 | GM24609-PA | 1..152 | 1..152 | 753 | 93.4 | Plus |
Dsec\GM25183-PA | 243 | GM25183-PA | 1..137 | 1..133 | 222 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12675-PA | 141 | GD12675-PA | 1..141 | 12..152 | 709 | 95.7 | Plus |
Dsim\GD14214-PA | 243 | GD14214-PA | 1..137 | 1..133 | 222 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12126-PA | 246 | GJ12126-PA | 1..139 | 1..133 | 204 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10957-PA | 243 | GK10957-PA | 38..137 | 30..133 | 195 | 40 | Plus |