Clone AT16211 Report

Search the DGRC for AT16211

Clone and Library Details

Library:AT
Tissue Source:Drosophila melanogaster adult testes
Created by:Ling Hong
Date Registered:2000-06-08
Comments:Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7
Original Plate Number:162
Well:11
Vector:pOTB7
Associated Gene/TranscriptCG31773-RA
Protein status:AT16211.pep: gold
Sequenced Size:2518

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31773 2003-01-01 Sim4 clustering to Release 3
CG31773 2008-04-29 Release 5.5 accounting
CG31773 2008-08-15 Release 5.9 accounting
CG31773 2008-12-18 5.12 accounting

Clone Sequence Records

AT16211.complete Sequence

2518 bp (2518 high quality bases) assembled on 2005-07-22

GenBank Submission: BT023801

> AT16211.complete
AATAAAAATTCTCAGATACAGATACATATACCGGAAATTCCGTCAACAAA
TTTCCATGATCAAAATTCACATATTTCGTTGGCATTTTAGTTAAACTTCT
TTACAAAAATGCATTCAGTGTTGCCGTTGATGTATCGTAGAAGGAGTTCC
CATCTGAAGGCCCTCCAATGGACGATCCAGTCGAGCCAGAATTTCTTCAA
GATGAGCTTCAAAGCGCCATCGATAAAAGTGCCTAAGGCTGCCGCCATTA
AGGAATTGGCCAATAAACCAACGCAACCCCAGTCTCAGCCCTCGCAATCG
CAGTCTTCGGCAACACAACCAACTCAACCGCCTCAGCAAGCGGAAATCAA
AAAGAATCCTTTGACAATGGGCGCCATTAGCCCCGCACCACCCACTCCCA
TTAGCCCAAAACCCTCAGTTCAACCAAAAATCCCAGATCAGCGGGCCAAG
TGGATGGCCAAGGTTTCTCCGGAATCGCAGAGAAAAGCGAAATTGGCAGC
TGCAGGAGGTTCTCCGCCTTCCGGTCCACCAAAGAACCAGTTTAGCCAAG
CAAATAATCCCAGTTTCGCGATGCCCGGTCAAAGTTCGCCTGCAAACTTT
AGTGCTGCACCTAAAACTCAAGCCTCCTGGCAGCAAAAGGTGGAAAAATC
TGCGGAAAATGAAGATTCCGGTGCATTCAAGGGTGCCTCTTCTGAGTCTC
AACGAAAAAACTGGATGAACCGCATGCAGGGATCGCAACAAAGGAAACAG
AATCAGTGGCTGAAAGAGATGCAGGCCAAACAGCAGGCTGGCAAGGATAT
TCAGGCACAGAAGATGCAGAAAATGGAGTCTCAAAAGGCCACGACGACCC
CAGCTGCACCACCTAAAGAAGCGGCTCCATCCACTCCACAACCGGCCGAA
AAGCCCGAAGAAAAGAGTCCAGAACATTTGGCATACTTAGATGCGATCAA
GCAACTGAATAGCTATCAGGTTTTGGAACCCACTTCCGGCAGAGCCACCA
CCAAGAGCAGTAGAAAGGAACAGGATCCGGTTATCGAGCAAACTTTGGAG
TGCCTGGAAAAGTCGGGTCTTACGAAAAAGGATCTGAAGGCCATACCCGT
AATACAGGTAGCCGGTTCCAAAGGACGGGGCTCAACGTGTGCCATCGTGG
AGAGTATTCTTCGGTGTCATGGGGTGAAAACTGGTGTTCTCTCCTCGCCG
CACCTGTTTTTAACCAGCGAAAGGATAAGGATCGACGGTGAACCCCTGAG
CGATGTTCAGTTTACGGAACTCTTTTGGAAAATCAACACTGATCTAGCGA
ATATGCAACCCACACCTTCCTATAACAAAATCATGACGGTCATGGCTTTC
CACGCTTTCCATCAAGCCGGCGTTGAGGTGGCCATTTTAGAAGTGGGAAA
TGCAGGCGCCAGTGATGCCACCAACATAGCCTCGCATGCCCAGACCATAG
GGATAACAACATTGGGATGGGAGCAGAGCTCGAATTTGGGAAATTCTTTA
AGGGATATAGCCTGGGCGAAGGCGTCCATTATGAAGCCGGAGGCCAATAT
CTATACGAATGTCACCCAAACGGAATGCTGTGAGGTTTTGGCCCAAAAGG
CCAAACAAATTGGCGCCCAACTTCGCCGTGTGCCAACATTTAACGACTAT
GTCGAAGGTGATATGAACAACAAGCTGCTGATGAACAAGGCAAACTACTC
TATGAGATTGAACGGATCCCTGGCCGTACAATTGGCCTACGATTTTTTGA
AGCGACACAAGCCCGAATATGTGGTAGGATTGGAACATAATTCTACTCTG
CTAACACCGGGAGCTAGTCGCGGAATCGAGATCTTTGAACAGCCCGGACA
CTTTGACTTCATGCGACACGACATGTTTAATGTCTATTTGGATAGCGCCG
ATACCTTTGAGTCGATGATGGCCTGCCGGGATTGGTTTTACACCAGAACA
CGTGCAAATCGACAGCCAAAAATCCTGCTGTTTAACAAGGTCAACGAGTT
CAATGCCAAGGATCTTCTGACTATTATACGCAGTAATTTGCGCTTCGAAG
AGGCCTGTTTTGTGCCCAATCCCAACTACTTCGAGGGCGAAATCCTGGCC
GAGGAGGATGGTAAGGCGATGGTATGGCACGGCATGGAGGAGCTGCAAAG
GGCCAAGAGGAATGCCGGAAATTGGAGAGCTCTCTGCGAGGAGAATGGCA
AAAGGGACAACTCGCAACTTTCCATATCCATCAATGCCTTCTTCGAGTAC
CTGACCAATAAGTACGGCAAACAGAAGTACGGAATGAAGAACGAACTGGA
TGTCCTGGTCACCGGCTCCCGGCAATTGGTGGCCGCCACCATATCGTGTC
TACGAAAAATGAAGTCATCGAATCCTTGGCAATGAAAATATAGGCTTAGA
GAATTTTCCTATGTTTTATTCGCCTTAAATTTCGTCGTGGTTTACGTTTA
CTTGTCTCTTTTTTTGTATATAAATACAATTGTAAAAATGTTTAAAAAAA
AAAAAAAAAAAAAAAAAA

AT16211.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31773-RA 2499 CG31773-RA 1..2493 1..2493 12465 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3911234..3913726 2493..1 12465 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 15:50:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3911796..3914288 2493..1 12465 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3911796..3914288 2493..1 12465 100 Minus
Blast to na_te.dros performed 2019-03-16 04:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 3428..3515 1755..1842 116 59.1 Plus

AT16211.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:55:50 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3911234..3913726 1..2493 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:08:19 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2277 109..2385 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:56:33 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2277 109..2385 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:44:37 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2277 109..2385 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:37:17 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2277 109..2385 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:53:24 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2277 109..2385 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:34:44 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2493 1..2493 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:56:33 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2493 1..2493 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:44:37 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2493 1..2493 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:37:17 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2493 1..2493 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:53:24 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
CG31773-RA 1..2493 1..2493 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:50 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3911796..3914288 1..2493 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:50 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3911796..3914288 1..2493 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:55:50 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3911796..3914288 1..2493 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:44:37 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3911796..3914288 1..2493 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:15:54 Download gff for AT16211.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3911796..3914288 1..2493 100   Minus

AT16211.pep Sequence

Translation from 108 to 2384

> AT16211.pep
MHSVLPLMYRRRSSHLKALQWTIQSSQNFFKMSFKAPSIKVPKAAAIKEL
ANKPTQPQSQPSQSQSSATQPTQPPQQAEIKKNPLTMGAISPAPPTPISP
KPSVQPKIPDQRAKWMAKVSPESQRKAKLAAAGGSPPSGPPKNQFSQANN
PSFAMPGQSSPANFSAAPKTQASWQQKVEKSAENEDSGAFKGASSESQRK
NWMNRMQGSQQRKQNQWLKEMQAKQQAGKDIQAQKMQKMESQKATTTPAA
PPKEAAPSTPQPAEKPEEKSPEHLAYLDAIKQLNSYQVLEPTSGRATTKS
SRKEQDPVIEQTLECLEKSGLTKKDLKAIPVIQVAGSKGRGSTCAIVESI
LRCHGVKTGVLSSPHLFLTSERIRIDGEPLSDVQFTELFWKINTDLANMQ
PTPSYNKIMTVMAFHAFHQAGVEVAILEVGNAGASDATNIASHAQTIGIT
TLGWEQSSNLGNSLRDIAWAKASIMKPEANIYTNVTQTECCEVLAQKAKQ
IGAQLRRVPTFNDYVEGDMNNKLLMNKANYSMRLNGSLAVQLAYDFLKRH
KPEYVVGLEHNSTLLTPGASRGIEIFEQPGHFDFMRHDMFNVYLDSADTF
ESMMACRDWFYTRTRANRQPKILLFNKVNEFNAKDLLTIIRSNLRFEEAC
FVPNPNYFEGEILAEEDGKAMVWHGMEELQRAKRNAGNWRALCEENGKRD
NSQLSISINAFFEYLTNKYGKQKYGMKNELDVLVTGSRQLVAATISCLRK
MKSSNPWQ*

AT16211.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24611-PA 770 GF24611-PA 1..766 1..758 2644 68.5 Plus
Dana\GF21378-PA 568 GF21378-PA 90..560 275..748 779 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24396-PA 759 GG24396-PA 1..759 1..758 3731 91.8 Plus
Dere\GG17729-PA 566 GG17729-PA 89..554 275..748 732 36.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11872-PA 690 GH11872-PA 33..683 75..753 1943 56.1 Plus
Dgri\GH11527-PA 690 GH11527-PA 33..683 75..753 1938 56 Plus
Dgri\GH24129-PA 557 GH24129-PA 33..511 260..748 709 35 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG31773-PA 758 CG31773-PA 1..758 1..758 3941 100 Plus
Fpgs-PB 542 CG2543-PB 69..530 279..748 743 37.5 Plus
Fpgs-PA 572 CG2543-PA 99..560 279..748 743 37.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15256-PA 769 GI15256-PA 20..764 22..755 1911 52.6 Plus
Dmoj\GI16385-PA 2373 GI16385-PA 1870..2364 248..753 791 35.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15860-PA 821 GL15860-PA 35..708 65..752 1870 54.9 Plus
Dper\GL13134-PA 545 GL13134-PA 76..543 279..754 740 36.1 Plus
Dper\GL15882-PA 334 GL15882-PA 121..330 542..752 738 62.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24212-PA 718 GA24212-PA 24..714 53..752 1863 53.9 Plus
Dpse\GA23032-PA 723 GA23032-PA 29..716 30..754 1739 48.6 Plus
Dpse\GA23521-PA 369 GA23521-PA 43..365 429..752 1149 64 Plus
Dpse\GA15391-PA 545 GA15391-PA 76..543 279..754 738 36.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18113-PA 758 GM18113-PA 1..758 1..758 4001 97.4 Plus
Dsec\GM11572-PA 571 GM11572-PA 94..559 275..748 755 37.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22722-PA 758 GD22722-PA 1..758 1..758 3982 97 Plus
Dsim\GD24795-PA 571 GD24795-PA 94..559 275..748 750 37.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17264-PA 740 GJ17264-PA 44..732 94..752 2027 57.3 Plus
Dvir\GJ16760-PA 568 GJ16760-PA 124..561 309..756 735 37.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23769-PA 697 GK23769-PA 1..694 1..755 2202 58 Plus
Dwil\GK25512-PA 583 GK25512-PA 64..574 240..755 854 37 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14783-PA 762 GE14783-PA 1..762 1..758 3595 91.1 Plus
Dyak\GE17018-PA 571 GE17018-PA 94..566 275..755 748 36.7 Plus

AT16211.hyp Sequence

Translation from 108 to 2384

> AT16211.hyp
MHSVLPLMYRRRSSHLKALQWTIQSSQNFFKMSFKAPSIKVPKAAAIKEL
ANKPTQPQSQPSQSQSSATQPTQPPQQAEIKKNPLTMGAISPAPPTPISP
KPSVQPKIPDQRAKWMAKVSPESQRKAKLAAAGGSPPSGPPKNQFSQANN
PSFAMPGQSSPANFSAAPKTQASWQQKVEKSAENEDSGAFKGASSESQRK
NWMNRMQGSQQRKQNQWLKEMQAKQQAGKDIQAQKMQKMESQKATTTPAA
PPKEAAPSTPQPAEKPEEKSPEHLAYLDAIKQLNSYQVLEPTSGRATTKS
SRKEQDPVIEQTLECLEKSGLTKKDLKAIPVIQVAGSKGRGSTCAIVESI
LRCHGVKTGVLSSPHLFLTSERIRIDGEPLSDVQFTELFWKINTDLANMQ
PTPSYNKIMTVMAFHAFHQAGVEVAILEVGNAGASDATNIASHAQTIGIT
TLGWEQSSNLGNSLRDIAWAKASIMKPEANIYTNVTQTECCEVLAQKAKQ
IGAQLRRVPTFNDYVEGDMNNKLLMNKANYSMRLNGSLAVQLAYDFLKRH
KPEYVVGLEHNSTLLTPGASRGIEIFEQPGHFDFMRHDMFNVYLDSADTF
ESMMACRDWFYTRTRANRQPKILLFNKVNEFNAKDLLTIIRSNLRFEEAC
FVPNPNYFEGEILAEEDGKAMVWHGMEELQRAKRNAGNWRALCEENGKRD
NSQLSISINAFFEYLTNKYGKQKYGMKNELDVLVTGSRQLVAATISCLRK
MKSSNPWQ*

AT16211.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31773-PA 758 CG31773-PA 1..758 1..758 3941 100 Plus
CG2543-PB 542 CG2543-PB 69..530 279..748 743 37.5 Plus
CG2543-PA 572 CG2543-PA 99..560 279..748 743 37.5 Plus