BDGP Sequence Production Resources |
Search the DGRC for AT16233
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 162 |
Well: | 33 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG3809-RA |
Protein status: | AT16233.pep: gold |
Preliminary Size: | 1305 |
Sequenced Size: | 1445 |
Gene | Date | Evidence |
---|---|---|
CG3809 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3809 | 2002-04-21 | Blastp of sequenced clone |
CG3809 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3809 | 2008-04-29 | Release 5.5 accounting |
CG3809 | 2008-08-15 | Release 5.9 accounting |
CG3809 | 2008-12-18 | 5.12 accounting |
1445 bp (1445 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113267
> AT16233.complete GCGAGCTGTTCTCTTCCACTCATAAATTTTGTCACATCAATCAAATTAAA CAGTTCGATACAGTAAAACAGCATGAACGACAAATAGGCGTAGAATCCAT CAGGTGTAGGAGTTCTCAAGAATCGGCGAGGGTCTAATATTGGGAATGTC CAGGCGGGTTTTTGGACTCAGTATAAAATCATTCCGATTGTTCCGAAGAA CTCCGATCCATCCCCCAGCATTCCAGCATTTTTCTGGTGGTGTCTTTCGA ACTTCCTTTAGGAGTTTCTGCGATTGTCAGGAACACCGAAGAATGGATCT ACCAGAGGGAATACTTATGGGCTTTGGCAACCCCCTGCTGGACATCACCT GCACCGTTGAGGATAATGTGATCCTGGAAAAGTACGGATTGGAAGCAAAT GCTGCGATCATTGCTGATGAAAAGCACGATGCCCTGTTCGATGAGTTGAT GAACATGGAAAATGTCATCTATTCGGCGGGTGGAGCCTGTCAGAACTCGA TGCGGATCTTCCAGTGGATCGTGCAGACTCCATTTCGAGCTGTGTTCATA GGGTCAGTGGGCAAGGATAAGCTAGGTGATCGCATCGAAAAGAGGGCCAA ATCCGATGGCCTGCTAACACTTTATCAGCTGAAGGAAGAGCTGCCGACAG GCTCTTGTGCTGTGATCATCAACGGTCCAAACCGCTCATTAGTGGCCAAC TTGGGCGCTGCCTCTCTCTTCAGCGACGACTGGATTGACGAGGATGATAA CATCTGCGCCTTGGATCGCGCCGAGTACTTCTACTTTACGGGCTTCTTTC TGGCCGTTTGTCCACCTGCCGTGGAGCGGGTAGCTAGGATGTGCTGCGAG ACCAATCGAATTATGATCCTCAACTTCAGCGCCGTGTTTGTGCTGCAGAT GCAAAAGGAAGCCTTGGGCAATATCCTGCAGTACGTGGATATAATCATCT GCAATAAGGAAGAGGCCATTGCATTTAGCGACACCAACGACTGGAAGACG AAGAATATCTTTGAGATCGGATCTAGGCTGCAGCAAATGCCCAAGGAAAA TACCCGACCAAGACTAGTAATGATTACGGATGCGGTGTGTCCTGTTCTCG TCTTCCAGGATAACGATCGCGTTCTGGAATACCCTGTTCCACCCGTAAAG CAGGGCGAGATTTTCGACACCAATGGTTGTGGCGACGCCTTCGTCGGCGG ATTCCTGGCCATGTACGTCCAAAGGATGCCCCTGGATTACTGCATCCGAA CGGGGATTTTCGCATCCCAGCAGGTCCTACACGTGGTCGGTGTTCAGATC GATAAGCTGCCAAAGTTTAGCGAGAAATGCATATGAAGGGGACCGATGCA TATTGTGTCTTTGCAAAACTTATCAAGTGACGAGTACCATTAGGACCTTA AATAAAATTTAAAGTTTTCAATATACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3809-RA | 1509 | CG3809-RA | 82..1509 | 1..1428 | 7020 | 99.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8023321..8023970 | 1..650 | 99 | -> | Plus |
chr3R | 8024079..8024855 | 651..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1191 | 146..1336 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1191 | 146..1336 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1191 | 146..1336 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1191 | 146..1336 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1191 | 146..1336 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1427 | 1..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1427 | 1..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1427 | 1..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1427 | 1..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3809-RA | 1..1427 | 1..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12197941..12198590 | 1..650 | 98 | -> | Plus |
3R | 12198697..12199473 | 651..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12197941..12198590 | 1..650 | 98 | -> | Plus |
3R | 12198697..12199473 | 651..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12197941..12198590 | 1..650 | 98 | -> | Plus |
3R | 12198697..12199473 | 651..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8023663..8024312 | 1..650 | 98 | -> | Plus |
arm_3R | 8024419..8025195 | 651..1427 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11938772..11939421 | 1..650 | 98 | -> | Plus |
3R | 11939528..11940304 | 651..1427 | 99 | Plus |
Translation from 145 to 1335
> AT16233.pep MSRRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRM DLPEGILMGFGNPLLDITCTVEDNVILEKYGLEANAAIIADEKHDALFDE LMNMENVIYSAGGACQNSMRIFQWIVQTPFRAVFIGSVGKDKLGDRIEKR AKSDGLLTLYQLKEELPTGSCAVIINGPNRSLVANLGAASLFSDDWIDED DNICALDRAEYFYFTGFFLAVCPPAVERVARMCCETNRIMILNFSAVFVL QMQKEALGNILQYVDIIICNKEEAIAFSDTNDWKTKNIFEIGSRLQQMPK ENTRPRLVMITDAVCPVLVFQDNDRVLEYPVPPVKQGEIFDTNGCGDAFV GGFLAMYVQRMPLDYCIRTGIFASQQVLHVVGVQIDKLPKFSEKCI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17233-PA | 347 | GF17233-PA | 1..347 | 50..396 | 1577 | 82.1 | Plus |
Dana\GF25174-PA | 339 | GF25174-PA | 1..339 | 54..393 | 694 | 44 | Plus |
Dana\GF12238-PA | 365 | GF12238-PA | 34..364 | 60..385 | 243 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18640-PA | 397 | GG18640-PA | 1..397 | 1..396 | 1904 | 90.5 | Plus |
Dere\GG13787-PA | 345 | GG13787-PA | 5..345 | 52..393 | 687 | 43.4 | Plus |
Dere\GG10762-PA | 366 | GG10762-PA | 34..362 | 60..382 | 271 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15477-PA | 347 | GH15477-PA | 1..347 | 50..396 | 1310 | 68 | Plus |
Dgri\GH23323-PA | 348 | GH23323-PA | 5..348 | 52..394 | 708 | 42.6 | Plus |
Dgri\GH20370-PA | 364 | GH20370-PA | 34..363 | 60..385 | 235 | 24.3 | Plus |
Dgri\GH22195-PA | 341 | GH22195-PA | 34..340 | 60..385 | 203 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3809-PA | 396 | CG3809-PA | 1..396 | 1..396 | 2083 | 100 | Plus |
AdenoK-PC | 345 | CG11255-PC | 5..345 | 52..393 | 710 | 44 | Plus |
AdenoK-PA | 345 | CG11255-PA | 5..345 | 52..393 | 710 | 44 | Plus |
AdenoK-PB | 345 | CG11255-PB | 7..345 | 54..393 | 707 | 44 | Plus |
Ady43A-PA | 366 | CG1851-PA | 34..365 | 60..385 | 272 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10274-PA | 411 | GI10274-PA | 65..411 | 50..396 | 1253 | 64.3 | Plus |
Dmoj\GI13634-PA | 346 | GI13634-PA | 5..346 | 52..393 | 726 | 44.2 | Plus |
Dmoj\GI20045-PA | 365 | GI20045-PA | 26..364 | 51..385 | 255 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22267-PA | 347 | GL22267-PA | 1..347 | 50..396 | 1292 | 69.5 | Plus |
Dper\GL24870-PA | 345 | GL24870-PA | 5..345 | 52..393 | 710 | 44 | Plus |
Dper\GL10944-PA | 368 | GL10944-PA | 35..365 | 60..385 | 265 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17700-PA | 347 | GA17700-PA | 1..347 | 50..396 | 1299 | 69.5 | Plus |
Dpse\GA23538-PA | 340 | GA23538-PA | 5..340 | 52..393 | 701 | 44 | Plus |
Dpse\GA14968-PA | 368 | GA14968-PA | 35..365 | 60..385 | 268 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24000-PA | 396 | GM24000-PA | 1..396 | 1..396 | 2077 | 98 | Plus |
Dsec\GM24613-PA | 345 | GM24613-PA | 5..345 | 52..393 | 720 | 43.4 | Plus |
Dsec\GM20810-PA | 366 | GM20810-PA | 34..365 | 60..385 | 273 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18802-PA | 347 | GD18802-PA | 1..347 | 50..396 | 1835 | 98.8 | Plus |
Dsim\GD12680-PA | 345 | GD12680-PA | 5..345 | 52..393 | 692 | 43.7 | Plus |
Dsim\GD10267-PA | 343 | GD10267-PA | 34..342 | 60..385 | 239 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11082-PA | 347 | GJ11082-PA | 1..347 | 50..396 | 1299 | 68.9 | Plus |
Dvir\GJ13971-PA | 346 | GJ13971-PA | 5..346 | 52..393 | 730 | 45.1 | Plus |
Dvir\GJ21287-PA | 367 | GJ21287-PA | 35..363 | 60..382 | 292 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11532-PA | 354 | GK11532-PA | 1..320 | 50..369 | 1197 | 65.9 | Plus |
Dwil\GK17347-PA | 345 | GK17347-PA | 5..345 | 52..393 | 693 | 42.6 | Plus |
Dwil\GK21524-PA | 367 | GK21524-PA | 34..361 | 60..382 | 231 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26161-PA | 347 | GE26161-PA | 1..347 | 50..396 | 1764 | 94.2 | Plus |
Dyak\GE20080-PA | 345 | GE20080-PA | 5..345 | 52..393 | 695 | 43.7 | Plus |
Dyak\GE24147-PA | 366 | GE24147-PA | 34..362 | 60..382 | 273 | 25.2 | Plus |
Translation from 145 to 1335
> AT16233.hyp MSRRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRM DLPEGILMGFGNPLLDITCTVEDNVILEKYGLEANAAIIADEKHDALFDE LMNMENVIYSAGGACQNSMRIFQWIVQTPFRAVFIGSVGKDKLGDRIEKR AKSDGLLTLYQLKEELPTGSCAVIINGPNRSLVANLGAASLFSDDWIDED DNICALDRAEYFYFTGFFLAVCPPAVERVARMCCETNRIMILNFSAVFVL QMQKEALGNILQYVDIIICNKEEAIAFSDTNDWKTKNIFEIGSRLQQMPK ENTRPRLVMITDAVCPVLVFQDNDRVLEYPVPPVKQGEIFDTNGCGDAFV GGFLAMYVQRMPLDYCIRTGIFASQQVLHVVGVQIDKLPKFSEKCI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3809-PA | 396 | CG3809-PA | 1..396 | 1..396 | 2083 | 100 | Plus |
AdenoK-PC | 345 | CG11255-PC | 5..345 | 52..393 | 710 | 44 | Plus |
AdenoK-PA | 345 | CG11255-PA | 5..345 | 52..393 | 710 | 44 | Plus |
AdenoK-PB | 345 | CG11255-PB | 7..345 | 54..393 | 707 | 44 | Plus |
Ady43A-PA | 366 | CG1851-PA | 34..365 | 60..385 | 272 | 25 | Plus |