BDGP Sequence Production Resources |
Search the DGRC for AT16536
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 165 |
Well: | 36 |
Vector: | pOTB7 |
Associated Gene/Transcript | Buffy-RA |
Protein status: | AT16536.pep: gold |
Preliminary Size: | 744 |
Sequenced Size: | 1074 |
Gene | Date | Evidence |
---|---|---|
CG8238 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8238 | 2002-01-09 | Blastp of sequenced clone |
CG8238 | 2003-01-01 | Sim4 clustering to Release 3 |
Buffy | 2008-04-29 | Release 5.5 accounting |
Buffy | 2008-08-15 | Release 5.9 accounting |
Buffy | 2008-12-18 | 5.12 accounting |
1074 bp (1074 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075219
> AT16536.complete CGCTTACTTCAACTTCGGTTCAATTCATTTTCAGCCTTCGACGAGCGCGG AACGTTTGCGGCAGCGTTTTTTGGCCGCGCTTCTCAAGTTTCAGCTCGCG TTGGGAAATAAACGGCGATTTCCCTCAGGATCTCGAACGAGTTCGGTTGC GCGAAACATGCCCGGCACCTCGTATCCCACGAATAACGATAATTTCAGCA ACGGATTTCCGATGGCCACCACACAAAGTGAGCGCCTCTTGCAGGCCCAG AATCGAAGAAAGTTCAGTTTTCCAGCCACACTACATTCCGCATCACTACT GGAGGTGGGTGGTGGTCCCAAGGAGACCACGAGGCGTAGGTTGAGCAATG TCAGCGATGCCGTAACCAGGAAACTCTCCTACACGATTGGCTGGAAGGCG GCACAGATTCCAGCGCAGGATATCATTTCTCAGGGTCGTTGCCTGTGCGG TCATTATATCAAGAGACGCCTCAGAAGATCTGGTTTGTTCAACAAAAAGC TGGGACTGCAGCGCATACGTAGCATACTGGGCTCCACCTCCATGGGCATT GTGCGCGATGTGTTTCCAGCGGTCCAAGTGCTGGGCGATGAACTGGAGCG CATGCATCCCCGGATATACAACGGAGTAGCTCGTCAGATTTGTCGGAATC CGGGTGGTGAGTTCCATACTCCGGATGCTGTGAGCTTGCTTTTGGGAGCC GTTGGTCGCGAGCTCTTCCGGGTGGAGATTACGTGGAGCAAGGTGATCTC TCTGTTCGCCATCGCCGGTGGGCTGTCCGTTGATTGTGTACGCCAAGGAC ATCCGGAATACTTGCCCAAGTTGATGGAGAGCGTTTCCGAGGTGATCGAA GATGAGCTGGTTCCGTGGATTAACGAGAATGGTGGTTGGAGTGGCATCAA CACACACGTTTTACCCACTACCAACAGCCTGAATCCTTTAGAGTGGACCA CTTTGGTTATAGGCGTAGTTTTTGGCCTAATTCTAGTTTTTATGATTCTG CGATTTATATTTAACTTGATTGTACCAAAAATATACCAACGATTTACGAA TTCCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Buffy-RA | 1259 | Buffy-RA | 1..1058 | 1..1058 | 5155 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7575330..7575639 | 580..889 | 1535 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 7574728..7575048 | 114..434 | 1530 | 98.4 | Plus |
chr2R | 21145070 | chr2R | 7575700..7575866 | 889..1055 | 835 | 100 | Plus |
chr2R | 21145070 | chr2R | 7575122..7575270 | 432..580 | 745 | 100 | Plus |
chr2R | 21145070 | chr2R | 7566777..7566891 | 1..115 | 530 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11688019..11688328 | 580..889 | 1535 | 99.7 | Plus |
2R | 25286936 | 2R | 11687417..11687737 | 114..434 | 1530 | 98.4 | Plus |
2R | 25286936 | 2R | 11688389..11688558 | 889..1058 | 850 | 100 | Plus |
2R | 25286936 | 2R | 11687811..11687959 | 432..580 | 745 | 100 | Plus |
2R | 25286936 | 2R | 11679473..11679587 | 1..115 | 530 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11689218..11689527 | 580..889 | 1535 | 99.6 | Plus |
2R | 25260384 | 2R | 11688616..11688936 | 114..434 | 1530 | 98.4 | Plus |
2R | 25260384 | 2R | 11689588..11689757 | 889..1058 | 850 | 100 | Plus |
2R | 25260384 | 2R | 11689010..11689158 | 432..580 | 745 | 100 | Plus |
2R | 25260384 | 2R | 11680672..11680786 | 1..115 | 530 | 97.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7566777..7566890 | 1..114 | 97 | -> | Plus |
chr2R | 7574729..7575047 | 115..433 | 98 | -> | Plus |
chr2R | 7575124..7575270 | 434..580 | 100 | -> | Plus |
chr2R | 7575331..7575639 | 581..889 | 99 | -> | Plus |
chr2R | 7575701..7575866 | 890..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..898 | 158..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..898 | 158..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..900 | 158..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..898 | 158..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..900 | 158..1057 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..1055 | 1..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..1055 | 1..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..1036 | 20..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..1055 | 1..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Buffy-RA | 1..1036 | 20..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11687418..11687736 | 115..433 | 98 | -> | Plus |
2R | 11687813..11687959 | 434..580 | 100 | -> | Plus |
2R | 11679473..11679586 | 1..114 | 97 | -> | Plus |
2R | 11688020..11688328 | 581..889 | 99 | -> | Plus |
2R | 11688390..11688555 | 890..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11687418..11687736 | 115..433 | 98 | -> | Plus |
2R | 11687813..11687959 | 434..580 | 100 | -> | Plus |
2R | 11679473..11679586 | 1..114 | 97 | -> | Plus |
2R | 11688020..11688328 | 581..889 | 99 | -> | Plus |
2R | 11688390..11688555 | 890..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11687418..11687736 | 115..433 | 98 | -> | Plus |
2R | 11687813..11687959 | 434..580 | 100 | -> | Plus |
2R | 11679473..11679586 | 1..114 | 97 | -> | Plus |
2R | 11688020..11688328 | 581..889 | 99 | -> | Plus |
2R | 11688390..11688555 | 890..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7566978..7567091 | 1..114 | 97 | -> | Plus |
arm_2R | 7574923..7575241 | 115..433 | 98 | -> | Plus |
arm_2R | 7575318..7575464 | 434..580 | 100 | -> | Plus |
arm_2R | 7575525..7575833 | 581..889 | 99 | -> | Plus |
arm_2R | 7575895..7576060 | 890..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11688617..11688935 | 115..433 | 98 | -> | Plus |
2R | 11689012..11689158 | 434..580 | 100 | -> | Plus |
2R | 11689219..11689527 | 581..889 | 99 | -> | Plus |
2R | 11689589..11689754 | 890..1055 | 100 | Plus | |
2R | 11680672..11680785 | 1..114 | 97 | -> | Plus |
Translation from 1 to 1054
> AT16536.hyp AYFNFGSIHFQPSTSAERLRQRFSAALLKFQLALGNKRRFPSGSRTISVA RNMPGTSYPTNNDNFSNGFPMATTQSERLLQAQNRRKFSFPATLHSASLL EVGGGPKETTRRRLSNVSDAVTRKLSYTIGWKAAQIPAQDIISQGRCLCG HYIKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDVFPAVQVLGDELER MHPRIYNGVARQICRNPGGEFHTPDAVSLLLGAVGRELFRVEITWSKVIS LFAIAGGLSVDCVRQGHPEYLPKLMESVSEVIEDELVPWINENGGWSGIN THVLPTTNSLNPLEWTTLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTN S
Translation from 157 to 1056
> AT16536.pep MPGTSYPTNNDNFSNGFPMATTQSERLLQAQNRRKFSFPATLHSASLLEV GGGPKETTRRRLSNVSDAVTRKLSYTIGWKAAQIPAQDIISQGRCLCGHY IKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDVFPAVQVLGDELERMH PRIYNGVARQICRNPGGEFHTPDAVSLLLGAVGRELFRVEITWSKVISLF AIAGGLSVDCVRQGHPEYLPKLMESVSEVIEDELVPWINENGGWSGINTH VLPTTNSLNPLEWTTLVIGVVFGLILVFMILRFIFNLIVPKIYQRFTNS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11452-PA | 271 | GF11452-PA | 1..266 | 1..266 | 1397 | 97.7 | Plus |
Dana\GF11057-PA | 305 | GF11057-PA | 101..296 | 88..284 | 527 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20214-PA | 298 | GG20214-PA | 1..298 | 1..298 | 1564 | 98.7 | Plus |
Dere\GG23208-PA | 300 | GG23208-PA | 96..291 | 88..284 | 531 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21024-PA | 298 | GH21024-PA | 1..297 | 1..297 | 1425 | 89 | Plus |
Dgri\GH21025-PA | 302 | GH21025-PA | 98..286 | 83..273 | 502 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Buffy-PA | 299 | CG8238-PA | 1..299 | 1..299 | 1553 | 100 | Plus |
Debcl-PA | 300 | CG33134-PA | 96..291 | 88..284 | 521 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18624-PA | 298 | GI18624-PA | 1..298 | 1..298 | 1463 | 92 | Plus |
Dmoj\GI18625-PA | 319 | GI18625-PA | 116..310 | 88..284 | 519 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10080-PA | 296 | GL10080-PA | 1..296 | 1..298 | 1492 | 94.3 | Plus |
Dper\GL20359-PA | 298 | GL20359-PA | 95..289 | 88..284 | 514 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20921-PA | 296 | GA20921-PA | 1..296 | 1..298 | 1492 | 94.3 | Plus |
Dpse\GA17309-PA | 298 | GA17309-PA | 95..289 | 88..284 | 514 | 46.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21300-PA | 299 | GM21300-PA | 1..299 | 1..299 | 1576 | 99.3 | Plus |
Dsec\GM20882-PA | 302 | GM20882-PA | 98..293 | 88..284 | 531 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10809-PA | 121 | GD10809-PA | 1..116 | 1..116 | 621 | 100 | Plus |
Dsim\GD10412-PA | 300 | GD10412-PA | 96..291 | 88..284 | 529 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21633-PA | 298 | GJ21633-PA | 1..298 | 1..298 | 1463 | 92 | Plus |
Dvir\GJ21634-PA | 315 | GJ21634-PA | 112..306 | 88..284 | 519 | 46.7 | Plus |