BDGP Sequence Production Resources |
Search the DGRC for AT16873
Library: | AT |
Tissue Source: | Drosophila melanogaster adult testes |
Created by: | Ling Hong |
Date Registered: | 2000-06-08 |
Comments: | Oligo dT-primed and directionally cloned at EcoRI and XhoI in pOTB7 |
Original Plate Number: | 168 |
Well: | 73 |
Vector: | pOTB7 |
Associated Gene/Transcript | CG15035-RA |
Protein status: | AT16873.pep: gold |
Sequenced Size: | 1511 |
Gene | Date | Evidence |
---|---|---|
CG15035 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15035 | 2005-01-26 | Blastp of sequenced clone |
CG15035 | 2008-04-29 | Release 5.5 accounting |
CG15035 | 2008-08-15 | Release 5.9 accounting |
CG15035 | 2008-12-18 | 5.12 accounting |
1511 bp (1511 high quality bases) assembled on 2005-01-26
GenBank Submission: BT021462
> AT16873.complete CGTTTGAATAGCACACAATCGCGTAGATTTCGTATAACATATACACATAG TTTTGTATAAAGGAAAGCGCAGGCTATGGATGTCGAAACAAGTCTGGATA TCGAAGAAATGCGCCGAAGGATTCAGCAAGGCATCAACAGATGCTGTGAA CAACTGCTTGAAATAGCCATGATTTTAACCCATAAAGGTGGTCAGGTTTT AAACCGTTTGAAGGGAGCATCATTCCCGGAGCTCGCCCAAAATAGTGAAA ATATCGGTAATGGTTCAATGTCCGAAAATCAGAATCAAAGGCTCGATCCC ATGACAAGTGCACAATATACTACTTTAGGATTTGGAAACTTTGATGGCGA GGGGGACTACTTGCGGCAGAAGAATAAAATCAACATTCAACTTCCGCGTC TTGTGAGCGTGACTTGCGGCTTTGCCAAGGATCACATAAGATATCCGGAA TATAATCGTGGAAAGTTTGGTGAGGATGCCTGGTTCATGTCCTCCAGTCC ACAGGCGTGCATAATGGGCGTGGCCGATGGAGTGGGCGGTTGGCGAAATT ATGGCGTTGATCCCGGAAAATTCAGTATGACCCTAATGCGATCCTGTGAA CGAATGTCACATGCACCCGATTTTAAGCCGAACAGACCGGAAATACTACT GGAACGAGCCTATTTTGATCTCCTAGACCAAAAGTGTCCCATTGTTGGCA GCTGTACGGCGTGTATTTTAGCTCTTAAACGAGATGATAGCACCTTATAT GCAGCAAATATCGGAGACAGTGGTTTTTTGGTGGTGCGATCTGGTAAAGT GGTTTGCCGGTCCCAGGAGCAGCAGCATCAATTTAACACGCCCTATCAAT TGGCATCGCCGCCTCCGGGTTATGACTTCGATGCAGTATCGGATGGGCCC GAATCAGCGGATACCATTCAATTCCCGATGCAACTGGGCGACGTCATTCT GCTGGCCACCGATGGGGTCTACGATAATGTACCTGAAAGCTTTCTCGTGG AGGTCCTTACGGAAATGTCTGGCATATCGAATCCCGTACGGCTTCAAATG GCCGCCAATACGGTGGCTTTAATGGCCCGCACGTTGAGCTTCAGTCCGAA ACACGATTCTCCATTTAGTCAGAATGCCCGGAAACACGACATCGATGCAT GGGGTGGAAAACCGGATGACATTACGGTCCTATTGGCCAGTGTCGTCTAG AATAGATCGGATATCCAAGGCTATATACAATCATTGAACAGCCACTTCGT AGCAAATTTTACTGACAAAAAAGAATTGTTCCAAAAAACTTTTCAATCAC TTATCACTTAACACAATCACTTATAGTAGATATTCAATCATTTAAGACTC TTTTCTTTTCAACTCTGCCATCACAAACCAATTTGTTTTGTACCTCTTTT TGTTTCAAGTTCGGCCTACAACTATGCCAGTTATCGAACAAAATTTTTAA AGTGTAATAAAATTTTTGTTTTACCATAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15035-RA | 1475 | CG15035-RA | 1..1475 | 1..1475 | 7375 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7293629..7295105 | 1477..1 | 7385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7401697..7403174 | 1478..1 | 7390 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7409795..7411272 | 1478..1 | 7390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7293629..7295105 | 1..1477 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1125 | 76..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1125 | 76..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1125 | 76..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1125 | 76..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1125 | 76..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1475 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1477 | 1..1477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1477 | 1..1477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1475 | 1..1475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15035-RA | 1..1477 | 1..1477 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7401698..7403174 | 1..1477 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7401698..7403174 | 1..1477 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7401698..7403174 | 1..1477 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7295731..7297207 | 1..1477 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7409796..7411272 | 1..1477 | 100 | Minus |
Translation from 75 to 1199
> AT16873.pep MDVETSLDIEEMRRRIQQGINRCCEQLLEIAMILTHKGGQVLNRLKGASF PELAQNSENIGNGSMSENQNQRLDPMTSAQYTTLGFGNFDGEGDYLRQKN KINIQLPRLVSVTCGFAKDHIRYPEYNRGKFGEDAWFMSSSPQACIMGVA DGVGGWRNYGVDPGKFSMTLMRSCERMSHAPDFKPNRPEILLERAYFDLL DQKCPIVGSCTACILALKRDDSTLYAANIGDSGFLVVRSGKVVCRSQEQQ HQFNTPYQLASPPPGYDFDAVSDGPESADTIQFPMQLGDVILLATDGVYD NVPESFLVEVLTEMSGISNPVRLQMAANTVALMARTLSFSPKHDSPFSQN ARKHDIDAWGGKPDDITVLLASVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21131-PA | 460 | GF21131-PA | 178..459 | 93..373 | 1069 | 68.8 | Plus |
Dana\GF25028-PA | 324 | GF25028-PA | 53..322 | 103..373 | 899 | 60.1 | Plus |
Dana\GF22865-PA | 332 | GF22865-PA | 56..325 | 105..373 | 650 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17623-PA | 375 | GG17623-PA | 1..375 | 1..374 | 1518 | 77.1 | Plus |
Dere\GG14592-PA | 321 | GG14592-PA | 54..319 | 107..373 | 888 | 59.9 | Plus |
Dere\GG12003-PA | 317 | GG12003-PA | 15..312 | 75..373 | 600 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12845-PA | 343 | GH12845-PA | 73..342 | 105..374 | 927 | 61.5 | Plus |
Dgri\GH15200-PA | 311 | GH15200-PA | 40..309 | 103..373 | 892 | 59.4 | Plus |
Dgri\GH13984-PA | 307 | GH13984-PA | 35..300 | 107..373 | 630 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15035-PA | 374 | CG15035-PA | 1..374 | 1..374 | 1968 | 100 | Plus |
CG12091-PB | 321 | CG12091-PB | 54..319 | 107..373 | 860 | 59.9 | Plus |
CG12091-PA | 321 | CG12091-PA | 54..319 | 107..373 | 860 | 59.9 | Plus |
fig-PA | 314 | CG7615-PA | 43..309 | 107..373 | 583 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14933-PA | 348 | GI14933-PA | 79..348 | 105..374 | 1000 | 65.6 | Plus |
Dmoj\GI16719-PA | 311 | GI16719-PA | 36..309 | 99..373 | 885 | 58.9 | Plus |
Dmoj\GI14148-PA | 311 | GI14148-PA | 36..309 | 99..373 | 885 | 58.9 | Plus |
Dmoj\GI22329-PA | 312 | GI22329-PA | 35..306 | 106..373 | 607 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22485-PA | 211 | GL22485-PA | 46..203 | 107..265 | 544 | 60.4 | Plus |
Dper\GL23811-PA | 326 | GL23811-PA | 41..315 | 99..374 | 486 | 38.7 | Plus |
Dper\GL14622-PA | 653 | GL14622-PA | 406..652 | 108..373 | 478 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11388-PA | 313 | GA11388-PA | 46..311 | 107..373 | 876 | 59.2 | Plus |
Dpse\GA20482-PA | 340 | GA20482-PA | 70..315 | 131..374 | 566 | 45.5 | Plus |
Dpse\GA28301-PA | 498 | GA28301-PA | 250..497 | 108..373 | 452 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17470-PA | 374 | GM17470-PA | 1..374 | 1..374 | 1661 | 83.7 | Plus |
Dsec\GM14206-PA | 321 | GM14206-PA | 54..319 | 107..373 | 886 | 59.9 | Plus |
Dsec\GM12223-PA | 314 | GM12223-PA | 43..309 | 107..373 | 593 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13469-PA | 321 | GD13469-PA | 54..319 | 107..373 | 886 | 59.9 | Plus |
Dsim\GD24581-PA | 197 | GD24581-PA | 1..193 | 1..193 | 807 | 78.8 | Plus |
Dsim\GD17671-PA | 314 | GD17671-PA | 43..309 | 107..373 | 597 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18963-PA | 348 | GJ18963-PA | 82..348 | 108..374 | 1008 | 66.7 | Plus |
Dvir\GJ12462-PA | 311 | GJ12462-PA | 40..309 | 103..373 | 887 | 59 | Plus |
Dvir\GJ10517-PA | 313 | GJ10517-PA | 35..307 | 106..373 | 622 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16148-PA | 359 | GK16148-PA | 92..359 | 107..374 | 1000 | 66.8 | Plus |
Dwil\GK17200-PA | 317 | GK17200-PA | 48..315 | 105..373 | 902 | 60.6 | Plus |
Dwil\GK19179-PA | 315 | GK19179-PA | 42..309 | 107..373 | 638 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17524-PA | 372 | GE17524-PA | 1..372 | 1..374 | 1471 | 74.7 | Plus |
Dyak\GE20952-PA | 321 | GE20952-PA | 54..319 | 107..373 | 886 | 59.9 | Plus |
Dyak\GE10429-PA | 320 | GE10429-PA | 49..315 | 107..373 | 579 | 46.5 | Plus |
Translation from 75 to 1199
> AT16873.hyp MDVETSLDIEEMRRRIQQGINRCCEQLLEIAMILTHKGGQVLNRLKGASF PELAQNSENIGNGSMSENQNQRLDPMTSAQYTTLGFGNFDGEGDYLRQKN KINIQLPRLVSVTCGFAKDHIRYPEYNRGKFGEDAWFMSSSPQACIMGVA DGVGGWRNYGVDPGKFSMTLMRSCERMSHAPDFKPNRPEILLERAYFDLL DQKCPIVGSCTACILALKRDDSTLYAANIGDSGFLVVRSGKVVCRSQEQQ HQFNTPYQLASPPPGYDFDAVSDGPESADTIQFPMQLGDVILLATDGVYD NVPESFLVEVLTEMSGISNPVRLQMAANTVALMARTLSFSPKHDSPFSQN ARKHDIDAWGGKPDDITVLLASVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15035-PA | 374 | CG15035-PA | 1..374 | 1..374 | 1968 | 100 | Plus |
CG12091-PB | 321 | CG12091-PB | 54..319 | 107..373 | 860 | 59.9 | Plus |
CG12091-PA | 321 | CG12091-PA | 54..319 | 107..373 | 860 | 59.9 | Plus |
fig-PA | 314 | CG7615-PA | 43..309 | 107..373 | 583 | 46.5 | Plus |